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Jason L. Stein

University of North Carolina at Chapel Hill

57H-index
256Paper Count
1.9WCitation Count
Published Papers 79
Publication Date
Massively parallel assessment of gene regulatory activity at human cortical-structure-associated variants
err2026-09-23
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errOAAI
errNana Matoba; Jessica C. McAfee; Oleh Krupa; Alvaro A. Beltran; Jessica L. Bell; Brandon D. Le; Jordan M. Valone; Hyunggyu Min; Gregory E. Crawford; Jesse R. Raab; Hyejung Won; Jason L. Stein
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Parallelized bright-field and fluorescence imaging platform for organoids
err2026-09-15
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errOAAI
errKanghyun Kim; Rubal Singla; Amey Chaware; Jieun Park; Ina Klockner; Josh Lerner; Kevin Li; Fanghong Shen; Clay Dugo; Paul Reamey; Aurélien Bègue; Mark Harfouche; Abhishek Mishra; Christopher A. McPherson; Jason L. Stein; Roarke Horstmeyer
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A single-cell multiomic analysis identifies molecular and gene-regulatory mechanisms dysregulated in developing Down syndrome neocortex
errScience
IF45.8
err2026-04-23
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PREAI
errCeline K. Vuong; Alexis Weber; Patrick Seong; Nana Matoba; Yu-Jen Chen; Jordan Peyer; Shahab Younesi; Angelo Salinda; Daniel Gomez; Gabriella Rivas; Abril Morales; Beck Shafie; Pan Zhang; Susanne Nichterwitz; Le Qi; Nolan T. Fernandez; Emily Friedman; Michael I. Love; Michael J. Gandal; Daniel H. Geschwind; William E. Lowry; Jason L. Stein; Luis de la Torre-Ubieta
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Assessing molecular gene by treatment interactions using a population of neural progenitors exposed to valproic acid and lithium
err2026-04-04
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errOAAI
errJordan M. Valone; Brandon D. Le; Nana Matoba; Jessica T. Mory; Justin M. Wolter; Michael I. Love; Jason L. Stein
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Computation and resource efficient genome-wide association analysis for large-scale imaging studies
err2026-02-28
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errOAAI
errZhiwen Jiang; Jason Stein; Tengfei Li; Ethan Fang; Yun Li; Patrick Sullivan; Hongtu Zhu
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Mapping rare protein-coding variants on multi-organ imaging traits
err2025-12-23
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errOAAI
errYijun Fan; Jie Chen; Zirui Fan; Julio Chirinos; Jason L. Stein; Patrick F. Sullivan; Rujin Wang; Ajay Nadig; David Y. Zhang; Shuai Huang; Zhiwen Jiang; Peter Yi Guan; Xinjie Qian; Ting Li; Haoyue Li; Zehui Sun; Marylyn D. Ritchie; Joan M. O’Brien; Walter Witschey; Daniel J. Rader; Tengfei Li; Hongtu Zhu; Bingxin Zhao
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TSC tunes progenitor balance and upper-layer neuron generation in neocortex
errNature
IF48.5
err2025-12-03
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PREAI
errCristine R. Casingal; Naoki Nakagawa; Keiko Yabuno-Nakagawa; Cailyn Meyer; Siling Liu; Vasiliki Gkini; Su-Ji Cho; Mario Skarica; Dan Liang; Jeremy M. Simon; Nana Matoba; Ahana Mallick; Rubal Singla; Jieun Park; Chu-Wei Huang; Hailey Wilson; Janice Lee; H. Troy Ghashghaei; Garret D. Stuber; Oskari Heikinheimo; Takashi Namba; Jason L. Stein; E. S. Anton
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AAV-dCas9 vector unsilences paternal Ube3a in neurons by impeding Ube3a-ATS transcription
err2025-09-02
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errOAAI
errJustin M. Wolter; Lucas M. James; Samantha L. Boeshore; Hanqian Mao; Eric S. McCoy; Daniel F. Ryan; Giulia Fragola; Bonnie Taylor-Blake; Jason L. Stein; Mark J. Zylka
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Transparency and ongoing communication with participants in brain organoid research: Consensus of an interdisciplinary working group
err2025-06-26
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errOAAI
errBetty Cohn; Megan Doerr; Pamela Feliciano; Stephanie M. Fullerton; Saskia Hendriks; Soren Holm; Insoo Hyun; Karin Jongsma; Karen M. Meagher; M. Elizabeth Ross; Jason L. Stein; Sharon F. Terry; Katherine E. MacDuffie
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Probabilistic classification of gene-by-treatment interactions on molecular count phenotypes
err2025-04-01
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errOAAI
errHarigaya, Yuriko; Matoba, Nana; Le, Brandon D.; Valone, Jordan M.; Stein, Jason L.; Love, Michael, I; Valdar, William
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Genetics of cell-type-specific post-transcriptional gene regulation during human neurogenesis
err2024-09-01
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errOAAI
errAygun, Nil; Vuong, Celine; Krupa, Oleh; Mory, Jessica; Le, Brandon D.; Valone, Jordan M.; Liang, Dan; Shafie, Beck; Zhang, Pan; Salinda, Angelo; Wen, Cindy; Gandal, Michael J.; Love, Michael I.; de la Torre-Ubieta, Luis; Stein, Jason L.
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Cross-site reproducibility of human cortical organoids reveals consistent cell type composition and architecture
err2024-09-01
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errOAAI
errGlass, Madison R.; Waxman, Elisa A.; Yamashita, Satoshi; Lafferty, Michael; Beltran, Alvaro A.; Farah, Tala; Patel, Niyanta K.; Singla, Rubal; Matoba, Nana; Ahmed, Sara; Srivastava, Mary; Drake, Emma; Davis, Liam T.; Yeturi, Meghana; Sun, Kexin; Love, Michael I.; Hashimoto-Torii, Kazue; French, Deborah L.; Stein, Jason L.
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Eye-brain connections revealed by multimodal retinal and brain imaging genetics
err2024-07-18
err5
errOAAI
errZhao, Bingxin; Li, Yujue; Fan, Zirui; Wu, Zhenyi; Shu, Juan; Yang, Xiaochen; Yang, Yilin; Wang, Xifeng; Li, Bingxuan; Wang, Xiyao; Copana, Carlos; Yang, Yue; Lin, Jinjie; Li, Yun; Stein, Jason L.; O'Brien, Joan M.; Li, Tengfei; Zhu, Hongtu
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Rigor and reproducibility in human brain organoid research: Where we are and where we need to go
err2024-06-01
err10
errOAAI
errSandoval, Soraya O.; Cappuccio, Gerarda; Kruth, Karina; Osenberg, Sivan; Khalil, Saleh M.; Mendez-Albelo, Natasha M.; Padmanabhan, Krishnan; Wang, Daifeng; Niciu, Mark J.; Bhattacharyya, Anita; Stein, Jason L.; Sousa, Andre M. M.; Waxman, Elisa A.; Buttermore, Elizabeth D.; Whye, Dosh; Sirois, Carissa L.; Williams, Aislinn; Maletic-Savatic, Mirjana; Zhao, Xinyu
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Mapping of neuronal and glial primary cilia contactome and connectome in the human cerebral cortex
errNEURON
IF15
err2024-01-01
err10
PREAI
errWu, Jun Yao; Cho, Su-Ji; Descant, Katherine; Li, Peter H.; Shapson-Coe, Alexander; Januszewski, Michal; Berger, Daniel R.; Meyer, Cailyn; Casingal, Cristine; Huda, Ariba; Liu, Jiaqi; Ghashghaei, Tina; Brenman, Mikayla; Jiang, Michelle; Scarborough, Joseph; Pope, Art; Jain, Viren; Stein, Jason L.; Guo, Jiami; Yasuda, Ryohei; Lichtman, Jeff W.; Anton, E. S.
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Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants
err2023-10-01
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errOAAI
errMcAfee, Jessica C.; Lee, Sool; Lee, Jiseok; Bell, Jessica L.; Krupa, Oleh; Davis, Jessica; Insigne, Kimberly; Bond, Marielle L.; Zhao, Nanxiang; Boyle, Alan P.; Phanstiel, Douglas H.; Love, Michael I.; Stein, Jason L.; Ruzicka, W. Brad; Davila-Velderrain, Jose; Kosuri, Sriram; Won, Hyejung
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Donor perspectives on informed consent and use of biospecimens for brain organoid research
err2023-07-01
err6
errOAAI
errMacDuffie, Katherine E.; Stein, Jason L.; Doherty, Dan; Jayadev, Suman; Girault, Jessica B.; Emmons, Katherine A.; Glass, Madison Rose; Dempsey, Jennifer C.; Marrus, Natasha; Botteron, Kelly N.; Dager, Stephen R.; Estes, Annette M.; Piven, Joseph; Wilfond, Benjamin S.
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Inferring cell-type-specific causal gene regulatory networks during human neurogenesis
err2023-05-30
err7
errOAAI
errAygun, Nil; Liang, Dan; Crouse, Wesley L.; Keele, Gregory R.; Love, Michael I.; Stein, Jason L.
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MicroRNA-eQTLs in the developing human neocortex link miR-4707-3p expression to brain size
err2023-01-11
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errOAAI
errLafferty, Michael J.; Ayguen, Nil; Patel, Niyanta K.; Krupa, Oleh; Liang, Dan; Wolter, Justin M.; Geschwind, Daniel H.; de la Torre-ubieta, Luis; Stein, Jason L.; Gleeson, Joseph G.
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