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Mark D. Adams

J. Craig Venter Institute

85H-index
258Paper Count
7.5WCitation Count
Published Papers 70
Publication Date
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Loss of O-antigen due to wbbL mutations is common and associated with increased mortality in Escherichia coli bloodstream infections
errScience Advances
IF12.5
err2026-07-01
err0
errOAAI
errKaleb J. Tyson; Amanda Z. Velez; Blake M. Hanson; Jianping Jiang; Kuan-Yi Lu; Felicia Ruffin; Granger Sutton; Lauren M. Brinkac; Thomas H. Clarke; Yazhong Tao; Derrick E. Fouts; Mark D. Adams; Cesar A. Arias; Sanjay Khandelwal; Vance G. Fowler; Joshua T. Thaden; Brian P. Conlon; Joshua B. Parsons
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errSave
Diagnostic utility of clinical genome reanalysis in rare pediatric disorders using long-read sequencing
errHuman Genetics and Genomics Advances
IF3.6
err2026-04-27
err0
errOAAI
errElizabeth A. Werren; Purva Vats; Gabriel E. Rech; Michael Peracchio; Cameron King; Elizabeth J. Charnysh; Ryan D. Gorham; Peter A. Audano; Peter N. Robinson; Melissa A. Kelly; Adam P. Matson; Mark D. Adams; Louisa Kalsner
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errSave
TEAL-Seq: targeted expression analysis sequencing
errMSPHERE
IF3.1
err2025-05-27
err0
errOAAI
errDoing, Georgia; Shanbhag, Priya; Bell, Isaac; Cassidy, Sara; Motakis, Efthymios; Aiken, Elizabeth; Oh, Julia; Adams, Mark D.
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errSave
Characterization of Collaborative Cross mouse founder strain CAST/EiJ as a novel model for lethal COVID-19
errSCIENTIFIC REPORTS
IF3.9
err2024-10-24
err0
errOAAI
errBaker, Candice N.; Duso, Debra; Kothapalli, Nagarama; Hart, Tricia; Casey, Sean; Cookenham, Tres; Kummer, Larry; Hvizdos, Janine; Lanzer, Kathleen; Vats, Purva; Shanbhag, Priya; Bell, Isaac; Tighe, Mike; Travis, Kelsey; Szaba, Frank; Harder, Jeffrey M.; Bedard, Olivia; Oberding, Natalie; Ward, Jerrold M.; Adams, Mark D.; Lutz, Cathleen; Bradrick, Shelton S.; Reiley, William W.; Rosenthal, Nadia A.
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errSave
Escherichia coli ST131 Associated with Increased Mortality in Bloodstream Infections from Urinary Tract Source
errJOURNAL OF CLINICAL MICROBIOLOGY
IF5.4
err2023-07-20
err6
errOAAI
errBrumwell, Amanda; Sutton, Granger; Lantos, Paul M. M.; Hoffman, Kate; Ruffin, Felicia; Brinkac, Lauren; Clarke, Thomas H. H.; Adams, Mark D. D.; Fowler Jr, Vance G. G.; Fouts, Derrick E. E.; Thaden, Joshua T. T.
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errSave
Negative Elongation Factor Is Required for the Maintenance of Proviral Latency but Does Not Induce Promoter-Proximal Pausing of RNA Polymerase II on the HIV Long Terminal Repeat
errMOLECULAR AND CELLULAR BIOLOGY
IF2.7
err2023-03-20
err103
errOAAI
errJadlowsky, Julie K.; Wong, Julian Y.; Graham, Amy C.; Dobrowolski, Curtis; Devor, Renee L.; Adams, Mark D.; Fujinaga, Koh; Karn, Jonathan
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errSave
A multiplexed, three-dimensional pooling and next-generation sequencing strategy for creating barcoded mutant arrays: construction of a Schizosaccharomyces pombe transposon insertion library
errNUCLEIC ACIDS RESEARCH
IF13.1
err2022-06-29
err7
errOAAI
errLi, Yanhui; Molyneaux, Neil; Zhang, Haitao; Zhou, Gang; Kerr, Carly; Adams, Mark D.; Berkner, Kathleen L.; Runge, Kurt W.
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errSave
Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 variants Alpha and Iota
errCOMMUNICATIONS BIOLOGY
IF5.1
err2022-05-11
err7
errOAAI
errPetrone, Mary E.; Rothman, Jessica E.; Breban, Mallery, I; Ott, Isabel M.; Russell, Alexis; Lasek-Nesselquist, Erica; Badr, Hamada; Kelly, Kevin; Omerza, Greg; Renzette, Nicholas; Watkins, Anne E.; Kalinich, Chaney C.; Alpert, Tara; Brito, Anderson F.; Earnest, Rebecca; Tikhonova, Irina R.; Castaldi, Christopher; Kelly, John P.; Shudt, Matthew; Plitnick, Jonathan; Schneider, Erasmus; Murphy, Steven; Neal, Caleb; Laszlo, Eva; Altajar, Ahmad; Pearson, Claire; Muyombwe, Anthony; Downing, Randy; Razeq, Jafar; Niccolai, Linda; Wilson, Madeline S.; Anderson, Margaret L.; Wang, Jianhui; Liu, Chen; Hui, Pei; Mane, Shrikant; Taylor, Bradford P.; Hanage, William P.; Landry, Marie L.; Peaper, David R.; Bilguvar, Kaya; Fauver, Joseph R.; Vogels, Chantal B. F.; Gardner, Lauren M.; Pitzer, Virginia E.; St George, Kirsten; Adams, Mark D.; Grubaugh, Nathan D.
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errSave
Shared and distinctive features of the gut microbiome of C57BL/6 mice from different vendors and production sites, and in response to a new vivarium
errLAB ANIMAL
IF3.9
err2021-06-14
err22
PREAI
errLong, Lauren L.; Svenson, Karen L.; Mourino, Anthony J.; Michaud, Michael; Fahey, James R.; Waterman, Linda; Vandegrift, Kathy L.; Adams, Mark D.
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errSave
Emergence of Resistance to Ceftazidime-Avibactam in a Pseudomonas aeruginosa Isolate Producing Derepressed blaPDC in a Hollow-Fiber Infection Model
errANTIMICROBIAL AGENTS AND CHEMOTHERAPY
IF4.5
err2021-05-18
err8
errOAAI
errDrusano, G. L.; Bonomo, Robert A.; Marshall, Steven M.; Rojas, Laura J.; Adams, Mark D.; Mojica, Maria F.; Kreiswirth, Barry N.; Chen, Liang; Mtchedlidze, Nino; Bacci, Meredith; Vicchiarelli, Michael; Bulitta, Jurgen B.; Louie, Arnold
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errSave
A New Twist: The Combination of Sulbactam/Avibactam Enhances Sulbactam Activity against Carbapenem-Resistant Acinetobacter baumannii (CRAB) Isolates
errANTIBIOTICS-BASEL
IF4.6
err2021-05-13
err14
errOAAI
errPasteran, Fernando; Cedano, Jose; Baez, Michelle; Albornoz, Ezequiel; Rapoport, Melina; Osteria, Jose; Montana, Sabrina; Le, Casin; Ra, Grace; Bonomo, Robert A.; Tolmasky, Marcelo E.; Adams, Mark; Corso, Alejandra; Ramirez, Maria Soledad
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errSave
Genome-Based Targeted Sequencing as a Reproducible Microbial Community Profiling Assay
errMSPHERE
IF3.1
err2021-04-28
err2
errOAAI
errBenjamino, Jacquelynn; Leopold, Benjamin; Phillips, Daniel; Adams, Mark D.
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errSave
Capsule carbohydrate structure determines virulence in Acinetobacter baumannii
errPLOS PATHOGENS
IF4.9
err2021-02-02
err70
errOAAI
errTalyansky, Yuli; Nielsen, Travis B.; Yan, Jun; Carlino-Macdonald, Ulrike; Di Venanzio, Gisela; Chakravorty, Somnath; Ulhaq, Amber; Feldman, Mario F.; Russo, Thomas A.; Vinogradov, Evgeny; Luna, Brian; Wright, Meredith S.; Adams, Mark D.; Spellberg, Brad
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errSave
Characterisation of ST25 NDM-1-producing Acinetobacter spp. strains leading the increase in NDM-1 emergence in Argentina
errJOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE
IF3.2
err2020-12-01
err6
errOAAI
errRodgers, Deja; Pasteran, Fernando; Calderon, Manuel; Jaber, Sara; Traglia, German M.; Albornoz, Ezequiel; Corso, Alejandra; Vila, Alejandro J.; Bonomo, Robert A.; Adams, Mark D.; Ramirez, Maria Soledad
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errSave
AbGRI4, a novel antibiotic resistance island in multiply antibiotic-resistant Acinetobacter baumannii clinical isolates
errJOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
IF3.6
err2020-07-18
err18
errOAAI
errChan, Agnes P.; Choi, Yongwook; Clarke, Thomas H.; Brinkac, Lauren M.; White, Richard C.; Jacobs, Michael R.; Bonomo, Robert A.; Adams, Mark D.; Fouts, Derrick E.
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errSave
Distinct Mechanisms of Dissemination of NDM-1 Metallo-β-Lactamase in Acinetobacter Species in Argentina
errANTIMICROBIAL AGENTS AND CHEMOTHERAPY
IF4.5
err2020-04-21
err23
errOAAI
errAdams, Mark D.; Pasteran, Fernando; Traglia, German M.; Martinez, Jasmine; Huang, Fanny; Liu, Christine; Fernandez, Jennifer S.; Lopez, Carolina; Gonzalez, Lisandro J.; Albornoz, Ezequiel; Corso, Alejandra; Vila, Alejandro J.; Bonomo, Robert A.; Ramirez, Maria Soledad
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errSave
Identification of Potential Virulence Factors in the Model Strain Acinetobacter baumannii A118
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2019-07-23
err30
errOAAI
errRamirez, Maria S.; Penwell, William F.; Traglia, German M.; Zimbler, Daniel L.; Gaddy, Jennifer A.; Nikolaidis, Nikolas; Arivett, Brock A.; Adams, Mark D.; Bonomo, Robert A.; Actis, Luis A.; Tolmasky, Marcelo E.
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Rapid Replacement of Acinetobacter baumannii Strains Accompanied by Changes in Lipooligosaccharide Loci and Resistance Gene Repertoire
errMBIO
IF4.7
err2019-04-30
err29
errOAAI
errAdams, Mark D.; Wright, Meredith S.; Karichu, James K.; Venepally, Pratap; Fouts, Derrick E.; Chan, Agnes P.; Richter, Sandra S.; Jacobs, Michael R.; Bonomo, Robert A.
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errSave
Antibiotic collateral sensitivity is contingent on the repeatability of evolution
errNATURE COMMUNICATIONS
IF15.7
err2019-01-18
err129
errOAAI
errNichol, Daniel; Rutter, Joseph; Bryant, Christopher; Hujer, Andrea M.; Lek, Sai; Adams, Mark D.; Jeavons, Peter; Anderson, Alexander R. A.; Bonomo, Robert A.; Scott, Jacob G.
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errSave
DNA assembly with error correction on a droplet digital microfluidics platform
errBMC BIOTECHNOLOGY
IF3.4
err2018-06-01
err16
errOAAI
errKhilko, Yuliya; Weyman, Philip D.; Glass, John I.; Adams, Mark D.; McNeil, Melanie A.; Griffin, Peter B.
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errSave

Research Directions

No research directions
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