Roger E. Bumgarner - Publications, H-index & Citations

Roger E. Bumgarner

university of washington

57H指数

186论文数

2.0W被引数

收录论文 60

发表时间

Prophylactic treatment with broadly neutralizing antibody VRC01 selects for escape mutants after infection in Antibody-Mediated Prevention trials 抗体介导预防试验中，使用广谱中和抗体VRC01进行预防性治疗会在感染后选择逃逸突变体

Nature Microbiology

IF19.4

2026-09-28

OAAI

Carolyn Williamson; Lyle Curry; Nonhlanhla N. Mkhize; Elena E. Giorgi; Craig A. Magaret; Bronwen E. Lambson; Sinethemba Bhebhe; Haajira Kaldine; Thandeka Moyo-Gwete; Morgane Rolland; Raabya Rossenkhan; Nina Marie G. Garcia; Chivonne Moodley; Anna Yssel; Yunda Huang; Alaine A. Marsden; Daniel B. Reeves; Bryan T. Mayer; Roger E. Bumgarner; Nicolas Beaume; Dylan H. Westfall; Michal Juraska; Allan C. DeCamp; Hugh Murrell; Hongjun Bai; Wenjie Deng; Alec P. Pankow; Tanmoy Bhattacharya; Talita York; Nonkululeko Ndabambi; Lennie Chen; Hong Zhao; Asanda Gwashu-Nyangiri; Ruwayhida Thebus; Paula Cohen; Ben Murrell; Shelly Karuna; John Hural; Nyaradzo Mgodi; Srilatha Edupuganti; Lynn Morris; David Montefiori; M. Juliana McElrath; Myron S. Cohen; Lawrence Corey; Paul T. Edlefsen; Peter B. Gilbert; Penny L. Moore; James I. Mullins

Long-read deep sequencing reveals high rates of multilineage transmission and rapid viral population changes in acute HIV infection 长读长深度测序揭示急性HIV感染中多谱系传播的高速率和病毒群体的快速变化

Nature Communications

IF15.7

2026-05-25

OAAI

James I. Mullins; Wenjie Deng; Elena E. Giorgi; Craig A. Magaret; Morgane Rolland; Tanmoy Bhattacharya; Dylan H. Westfall; Anna E. J. Yssel; Roger E. Bumgarner; Ben Murrell; Thumbi Ndung’u; Merlin L. Robb; Raabya Rossenkhan; Paul T. Edlefsen; Krista L. Dong; Lennie Chen; Asanda Gwashu-Nyangiwe; Hong Zhao; Ruwayhida Thebus; Nonkululeko Ndabambi; Bruna Galvao; Fredrick Sawe; Sorachai Nitayaphan; Talita York; David Matten; Hugh Murrell; Alec P. Pankow; Michal Juraska; James Ludwig; John Hural; Myron S. Cohen; Lawrence Corey; M. Juliana McElrath; Peter B. Gilbert; Carolyn Williamson

Influence of the broadly neutralizing antibody VRC01 on HIV breakthrough virus populations in antibody-mediated prevention trials 在抗体介导的预防试验中，广泛中和抗体VRC01对HIV突破性病毒人群的影响

Nature Communications

IF15.7

2026-04-03

OAAI

Carolyn Williamson; Chivonne Moodley; Craig A. Magaret; Elena E. Giorgi; Morgane Rolland; Dylan H. Westfall; Anna Yssel; Wenjie Deng; Raabya Rossenkhan; Nonhlanhla N. Mkhize; Lennie Chen; Hong Zhao; Tanmoy Bhattacharya; Alec Pankow; Ben Murrell; Talita York; Asanda Gwashu-Nyangiwe; Nonkululeko Ndabambi; Ruwayhida Thebus; Paula Cohen; Bronwen Lambson; Haajira Kaldine; Sinethemba Bhebhe; Michal Juraska; Hongjun Bai; Allan C. deCamp; Maurine D. Miner; James Ludwig; Cindy Molitor; Nicolas Beaume; David Matten; Yunda Huang; Lily Zhang; Daniel B. Reeves; Bryan Mayer; Shelly T. Karuna; John A. Hural; Lynn Morris; David Montefiori; Roger E. Bumgarner; Penny L. Moore; Paul T. Edlefsen; Srilatha Edupuganti; Nyaradzo Mgodi; M. Juliana McElrath; Myron S. Cohen; Lawrence Corey; Peter B. Gilbert; James I. Mullins

Genomic Islands Shape the Genetic Background of Both JP2 and Non-JP2 Aggregatibacter actinomycetemcomitans

PATHOGENS

IF3.3

2022-09-13

OAAI

Kittichotirat, Weerayuth; Bumgarner, Roger E.; Chen, Casey

Bacterial cyclic diguanylate signaling networks sense temperature

NATURE COMMUNICATIONS

IF15.7

2021-03-31

OAAI

Almblad, Henrik; Randall, Trevor E.; Liu, Fanny; Leblanc, Katherine; Groves, Ryan A.; Kittichotirat, Weerayuth; Winsor, Geoffrey L.; Fournier, Nicolas; Au, Emily; Groizeleau, Julie; Rich, Jacquelyn D.; Lou, Yuefei; Granton, Elise; Jennings, Laura K.; Singletary, Larissa A.; Winstone, Tara M. L.; Good, Nathan M.; Bumgarner, Roger E.; Hynes, Michael F.; Singh, Manu; Stietz, Maria Silvina; Brinkman, Fiona S. L.; Kumar, Ayush; Brassinga, Ann Karen Cornelia; Parsek, Matthew R.; Tseng, Boo Shan; Lewis, Ian A.; Yipp, Bryan G.; MacCallum, Justin L.; Harrison, Joe Jonathan

Cutibacterium acnes Isolates from Deep Tissue Specimens Retrieved during Revision Shoulder Arthroplasty: Similar Colony Morphology Does Not Indicate Clonality

JOURNAL OF CLINICAL MICROBIOLOGY

IF5.4

2020-01-28

OAAI

Bumgarner, Roger E.; Harrison, Della; Hsu, Jason E.

Transcriptomic Analysis of Aggregatibacter actinomycetemcomitans Core and Accessory Genes in Different Growth Conditions

PATHOGENS

IF3.3

2019-12-03

OAAI

Tjokro, Natalia O.; Kittichotirat, Weerayuth; Torittu, Annamari; Ihalin, Riikka; Bumgarner, Roger E.; Chen, Casey

Temporal genetic association and temporal genetic causality methods for dissecting complex networks

NATURE COMMUNICATIONS

IF15.7

2018-09-28

OAAI

Lin, Luan; Chen, Quan; Hirsch, Jeanne P.; Yoo, Seungyeul; Yeung, Kayee; Bumgarner, Roger E.; Tu, Zhidong; Schadt, Eric E.; Zhu, Jun

Digital detection of endonuclease mediated gene disruption in the HIV provirus

SCIENTIFIC REPORTS

IF3.9

2016-02-02

OAAI

Sedlak, Ruth Hall; Liang, Shu; Niyonzima, Nixon; Feelixge, Harshana S. De Silva; Roychoudhury, Pavitra; Greninger, Alexander L.; Weber, Nicholas D.; Boissel, Sandrine; Scharenberg, Andrew M.; Cheng, Anqi; Magaret, Amalia; Bumgarner, Roger; Stone, Daniel; Jerome, Keith R.

Evolutionary Divergence of Aggregatibacter actinomycetemcomitans

JOURNAL OF DENTAL RESEARCH

IF5.9

2015-09-29

OAAI

Kittichotirat, W.; Bumgarner, R. E.; Chen, C.

Lack of viral control and development of combination antiretroviral therapy escape mutations in macaques after bone marrow transplantation

AIDS

IF3.1

2015-08-24

OAAI

Peterson, Christopher W.; Haworth, Kevin G.; Polacino, Patricia; Huang, Meei-Li; Sykes, Craig; Obenza, Willimark M.; Repetto, Andrea C.; Kashuba, Angela; Bumgarner, Roger; DeRosa, Stephen C.; Woolfrey, Ann E.; Jerome, Keith R.; Mullins, James I.; Hu, Shiu-Lok; Kiem, Hans-Peter

Resistance detected by pyrosequencing following zidovudine monotherapy for prevention of HIV-1 mother-to-child-transmission

AIDS

IF3.1

2015-07-31

OAAI

Olson, Scott C.; Ngo-Giang-Huong, Nicole; Beck, Ingrid; Deng, Wenjie; Britto, Paula; Shapiro, David E.; Bumgarner, Roger E.; Mullins, James I.; Van Dyke, Russell B.; Jourdain, Gonzague; Frenkel, Lisa M.

Comparative genomic analysis of seven Mycoplasma hyosynoviae strains

MICROBIOLOGYOPEN

IF4.6

2015-02-18

OAAI

Bumgardner, Eric A.; Kittichotirat, Weerayuth; Bumgarner, Roger E.; Lawrence, Paulraj K.

Validation of an Oligonucleotide Ligation Assay for Quantification of Human Immunodeficiency Virus Type 1 Drug-Resistant Mutants by Use of Massively Parallel Sequencing

JOURNAL OF CLINICAL MICROBIOLOGY

IF5.4

2014-07-01

OAAI

Beck, Ingrid A.; Deng, Wenjie; Payant, Rachel; Hall, Robert; Bumgarner, Roger E.; Mullins, James I.; Frenkel, Lisa M.

Laser capture microdissection enables cellular and molecular studies of tooth root development

international journal of mining science and technology

IF12.2

2012-03-16

OAAI

Sun, Jian-Xun; Horst, Orapin V.; Bumgarner, Roger; Lakely, Bryce; Somerman, Martha J.; Zhang, Hai

A prioritization analysis of disease association by data-mining of functional annotation of human genes 通过人类基因功能注释的数据挖掘对疾病关联进行优先级分析

GENOMICS

IF3

2012-01-01

OAAI

Taniya, Takayuki; Tanaka, Susumu; Yamaguchi-Kabata, Yumi; Hanaoka, Hideki; Yamasaki, Chisato; Maekawa, Harutoshi; Barrero, Roberto A.; Lenhard, Boris; Datta, Milton W.; Shimoyama, Mary; Bumgarner, Roger; Chakraborty, Ranajit; Hopkinson, Ian; Jia, Libin; Hide, Winston; Auffray, Charles; Minoshima, Shinsei; Imanishi, Tadashi; Gojobori, Takashi

Construction of regulatory networks using expression time-series data of a genotyped population

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2011-11-14

OAAI

Yeung, Ka Yee; Dombek, Kenneth M.; Lo, Kenneth; Mittler, John E.; Zhu, Jun; Schadt, Eric E.; Bumgarner, Roger E.; Raftery, Adrian E.

High-Density Lipoprotein Suppresses the Type I Interferon Response, a Family of Potent Antiviral Immunoregulators, in Macrophages Challenged With Lipopolysaccharide

CIRCULATION

IF38.6

2010-11-09

123

OAAI

Suzuki, Masashi; Pritchard, David K.; Becker, Lev; Hoofnagle, Andrew N.; Tanimura, Natsuko; Bammler, Theo K.; Beyer, Richard P.; Bumgarner, Roger; Vaisar, Tomas; de Beer, Maria C.; de Beer, Frederick C.; Miyake, Kensuke; Oram, John F.; Heinecke, Jay W.

A three-way comparative genomic analysis of Mannheimia haemolytica isolates

BMC GENOMICS

IF3.7

2010-10-04

OAAI

Lawrence, Paulraj K.; Kittichotirat, Weerayuth; McDermott, Jason E.; Bumgarner, Roger E.

Markedly different genome arrangements between serotype a strains and serotypes b or c strains of Aggregatibacter actinomycetemcomitans

BMC GENOMICS

IF3.7

2010-09-08

OAAI

Kittichotirat, Weerayuth; Bumgarner, Roger; Chen, Casey

研究方向