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Cross-Institutional Validation of a Multimodal Deep Learning Model for Glioblastoma Survival Prediction 跨机构验证用于胶质母细胞瘤生存预测的多模态深度学习模型 Hartsock, Iryna; Khanna, Rakesh; Chunhua, Qingrong; Chunhua, Yan; Waqas, Asim; Ullah, Ehsan; Vogelbaum, Michael; Farinhas, Joaquim; Rasool, Ghulam; Meerzaman, Daoud 分享 收藏
Oncopacket: integration of cancer research data using GA4GH phenopackets Oncopacket：利用GA4GH phenopackets整合癌症研究数据 Sierk, Michael; Danis, Daniel; Patil, Sujay; Kishor, Nobal; Mondal, Rajdeep; Jha, Abhishek; Chen, Qingrong; Yan, Chunhua; Munoz-Torres, Monica; Meerzaman, Daoud; Robinson, Peter N.; Reese, Justin T. 分享 收藏
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TRAIL induces cytokine production via the NFkB2 pathway promoting neutrophil chemotaxis and neutrophil-mediated immune-suppression in triple negative breast cancer cells TRAIL通过NFkB2通路诱导细胞因子产生，促进中性粒细胞趋化作用以及三阴性乳腺癌细胞中的中性粒细胞介导的免疫抑制。 Kundu, Manjari; Greer, Yoshimi E.; Lobanov, Alexei; Ridnour, Lisa; Donahue, Renee N.; Ng, Yeap; Ratnayake, Shashi; White, Karley; Voeller, Donna; Weltz, Sarah; Chen, Qingrong; Lockett, Stephen J.; Cam, Maggie; Meerzaman, Daoud; Wink, David A.; Weigert, Roberto; Lipkowitz, Stanley 分享 收藏
The ESCRT protein CHMP5 promotes T cell leukemia by enabling BRD4-p300-dependent transcription ESCRT蛋白CHMP5通过促进BRD4-p300依赖性转录来促进T细胞白血病的发生。 Umphred-Wilson, Katharine; Ratnayake, Shashikala; Tang, Qianzi; Wang, Rui; Chaudhary, Sneha Ghosh; Ballachanda, Devaiah N.; Trichka, Josephine; Wisniewski, Jan; Zhou, Lan; Chen, Qingrong; Meerzaman, Daoud; Singer, Dinah S.; Adoro, Stanley 分享 收藏
Nitric oxide inhibits ten-eleven translocation DNA demethylases to regulate 5mC and 5hmC across the genome 一氧化氮通过抑制十十一易位DNA去甲基化酶来调控基因组中的5mC和5hmC Palczewski, Marianne B.; Kuschman, Hannah Petraitis; Hoffman, Brian M.; Kathiresan, Venkatesan; Yang, Hao; Glynn, Sharon A.; Wilson, David L.; Kool, Eric T.; Montfort, William R.; Chang, Jenny; Petenkaya, Aydolun; Chronis, Constantinos; Cundari, Thomas R.; Sappa, Sushma; Islam, Kabirul; Mcvicar, Daniel W.; Fan, Yu; Chen, Qingrong; Meerzaman, Daoud; Sierk, Michael; Thomas, Douglas D. 分享 收藏
Single Cell Transcriptome Analysis of CD34+Cells from Patients with RUNX1-Fpdmm at Different Stages of Disease Progression CD34+细胞在RUNX1-Fpdmm不同疾病进展阶段中的单细胞转录组分析 Bresciani, Erica; Capaldo, Bian J.; Kajdic, Amra; Deuitch, Natalie T.; Craft, Kathleen; Chong, Shawn; Elkahloun, Abdel G.; Park, Morgan; Young, Alice; Young, David J.; Meerzaman, Daoud; Chen, Qingrong; Liu, Paul P. 分享 收藏
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Cellular fate of a plant virus immunotherapy candidate Omole, Anthony O.; Affonso de Oliveira, Jessica Fernanda; Sutorus, Lucas; Karan, Sweta; Zhao, Zhongchao; Neun, Barry W.; Cedrone, Edward; Clogston, Jeffrey D.; Xu, Jie; Sierk, Michael; Chen, Qingrong; Meerzaman, Daoud; Dobrovolskaia, Marina A.; Steinmetz, Nicole F. 分享 收藏
Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome Masood, Daniall; Ren, Luyao; Nguyen, Cu; Brundu, Francesco G.; Zheng, Lily; Zhao, Yongmei; Jaeger, Erich; Li, Yong; Cha, Seong Won; Halpern, Aaron; Truong, Sean; Virata, Michael; Yan, Chunhua; Chen, Qingrong; Pang, Andy; Alberto, Reyes; Xiao, Chunlin; Yang, Zhaowei; Chen, Wanqiu; Wang, Charles; Cross Jr, Frank; Catreux, Severine; Shi, Leming; Beaver, Julia A.; Xiao, Wenming; Meerzaman, Daoud M. 分享 收藏
Proteogenomic analysis of enriched HGSOC tumor epithelium identifies prognostic signatures and therapeutic vulnerabilities (vol 8, 68, 2024) 富集HGSOC肿瘤上皮的蛋白质基因组分析确定预后特征和治疗弱点 (vol 8，68，2024) Bateman, Nicholas W.; Abulez, Tamara; Soltis, Anthony R.; McPherson, Andrew; Choi, Seongmin; Garsed, Dale W.; Pandey, Ahwan; Tian, Chunqiao; Hood, Brian L.; Conrads, Kelly A.; Teng, Pang-ning; Oliver, Julie; Gist, Glenn; Mitchell, Dave; Litzi, Tracy J.; Tarney, Christopher M.; Crothers, Barbara A.; Mhawech-Fauceglia, Paulette; Dalgard, Clifton L.; Wilkerson, Matthew D.; Pierobon, Mariaelena; Petricoin, Emanuel F.; Yan, Chunhua; Meerzaman, Daoud; Bodelon, Clara; Wentzensen, Nicolas; Lee, Jerry S. H.; Huntsman, David G.; Shah, Sohrab; Shriver, Craig D.; Phippen, Neil T.; Darcy, Kathleen M.; Bowtell, David D. L.; Conrads, Thomas P.; Maxwell, G. Larry 分享 收藏
NCI Cancer Research Data Commons: Lessons Learned and Future State Kim, Erika; Davidsen, Tanja; Davis-Dusenbery, Brandi N.; Baumann, Alexander; Maggio, Angela; Chen, Zhaoyi; Meerzaman, Daoud; Casas-Silva, Esmeralda; Pot, David; Pihl, Todd; Otridge, John; Shalley, Eve; Barnholtz-Sloan, Jill S.; Kerlavage, Anthony R. 分享 收藏
Proteogenomic analysis of enriched HGSOC tumor epithelium identifies prognostic signatures and therapeutic vulnerabilities 富集HGSOC肿瘤上皮的蛋白质基因组分析确定预后特征和治疗脆弱性 Bateman, Nicholas W.; Abulez, Tamara; Soltis, Anthony R.; Mcpherson, Andrew; Choi, Seongmin; Garsed, Dale W.; Pandey, Ahwan; Tian, Chunqiao; Hood, Brian L.; Conrads, Kelly A.; Teng, Pang-ning; Oliver, Julie; Gist, Glenn; Mitchell, Dave; Litzi, Tracy J.; Tarney, Christopher M.; Crothers, Barbara A.; Mhawech-Fauceglia, Paulette; Dalgard, Clifton L.; Wilkerson, Matthew D.; Pierobon, Mariaelena; Petricoin, Emanuel F.; Yan, Chunhua; Meerzaman, Daoud; Bodelon, Clara; Wentzensen, Nicolas; Lee, Jerry S. H.; Huntsman, David G.; Shah, Sohrab; Shriver, Craig D.; Phippen, Neil T.; Darcy, Kathleen M.; Bowtell, David D. L.; Conrads, Thomas P.; Maxwell, G. Larry 分享 收藏
Glioblastoma survival is associated with distinct proteomic alteration signatures post chemoirradiation in a large-scale proteomic panel (vol 13, 1127645, 2023) Krauze, Andra Valentina; Sierk, Michael; Nguyen, Trinh; Chen, Qingrong; Yan, Chunhua; Hu, Ying; Jiang, William; Tasci, Erdal; Zgela, Theresa Cooley; Sproull, Mary; Mackey, Megan; Shankavaram, Uma; Meerzaman, Daoud; Camphausen, Kevin 分享 收藏
Proteogenomic analysis of enriched tumor epithelium identifies prognostic signatures and an increased dependency of homologous recombination proficient cells on bmi1 in high grade serous ovarian cancer Maxwell, George Larry; Bateman, Nicholas; Abulez, Tamara; Soltis, Anthony; McPherson, Andrew; Choi, Seongmin; Garsed, Dale; Tian, Chunqiao; Hood, Brian; Conrads, Kelly; Teng, Pang-ning; Oliver, Julie; Gist, Glenn; Mitchell, Dave; Litzi, Tracy; Tarney, Christopher; Dalgard, Clifton; Wilkerson, Matthew; Pierobon, Mariaelena; Petricoin, Emmanuel; Yan, Chunhua; Meerzaman, Daoud; Bodelon, Clara; Wentzensen, Nicolas; Lee, Jerry S. H.; Huntsman, David; Shah, Sohrab; Shriver, Craig; Phippen, Neil; Darcy, Kathleen; Bowtell, David; Conrads, Thomas 分享 收藏
Abundant binary promoter switches in lineage-determining transcription factors indicate a digital component of cell fate determination Li, Hongchuan; Rahman, Md Ahasanur; Ruesch, Michael; Eisele, Caprice D.; Anderson, Erik M.; Wright, Paul W.; Cao, Jennie; Ratnayake, Shashikala; Chen, Qingrong; Yan, Chunhua; Meerzaman, Daoud; Abraham, Roshini S.; Freud, Aharon G.; Anderson, Stephen K. 分享 收藏
Glioblastoma survival is associated with distinct proteomic alteration signatures post chemoirradiation in a large-scale proteomic panel Krauze, Andra Valentina; Sierk, Michael; Nguyen, Trinh; Chen, Qingrong; Yan, Chunhua; Hu, Ying; Jiang, William; Tasci, Erdal; Zgela, Theresa Cooley; Sproull, Mary; Mackey, Megan; Shankavaram, Uma; Meerzaman, Daoud; Camphausen, Kevin 分享 收藏
The General Transcription Factor TAF7 Is Essential for Embryonic Development but Not Essential for the Survival or Differentiation of Mature T Cells Gegonne, Anne; Tai, Xuguang; Zhang, Jinghui; Wu, Gang; Zhu, Jianjian; Yoshimoto, Aki; Hanson, Jeffrey; Cultraro, Constance; Chen, Qing-Rong; Guinter, Terry; Yang, Zhihui; Hathcock, Karen; Singer, Alfred; Rodriguez-Canales, Jaime; Tessarollo, Lino; Mackem, Susan; Meerzaman, Daoud; Buetow, Ken; Singer, Dinah S. 分享 收藏
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