Ichiro Hiratani - Publications, H-index & Citations

Ichiro Hiratani

riken center for biosystems dynamics research

27H指数

74论文数

3.9K被引数

收录论文 30

发表时间

Single-cell mapping of chromosome breaks identifies multiple fragile site classes with distinct DNA replication timing landscapes 单细胞染色体断裂图谱鉴定出具有不同DNA复制时间景观的多种脆性位点类别

Nature Communications

IF15.7

2026-09-23

OAAI

Jothivanan Elumalai; Ichiro Hiratani

Nuclear compartmentalization at the G1/S transition plays a key role in DNA replication control 细胞核区室化在G1/S转换中对DNA复制调控发挥关键作用

Nature Communications

IF15.7

2026-08-10

OAAI

Asami Oji; Kosuke Yusa; Izumi Noda; Takako Ichinose; Yoshiko Kondo; Ichiro Hiratani

scRepli-RamDA-seq: a multi-omics technology enabling the analysis of gene expression dynamics during S-phase scRepli-RamDA-seq：一种多组学技术，可实现对S期基因表达动态的分析

Nature Communications

IF15.7

2025-12-15

OAAI

Rawin Poonperm; Taiki Yoneda; Taito Imada; Saori Takahashi; Takako Ichinose; Hisashi Miura; Tetsutaro Hayashi; Mariko Kuse; Mika Yoshimura; Koji Nagao; Chikashi Obuse; Itoshi Nikaido; Ichiro Hiratani; Shin-ichiro Takebayashi

Homeotic and nonhomeotic patterns in the tetrapod vertebral formula 四足椎体公式中的同源和非同源模式

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2024-11-11

OAAI

Cerbus, Rory T.; Hiratani, Ichiro; Kawaguchi, Kyogo

Structure and dynamics of nuclear A/B compartments and subcompartments

CURRENT OPINION IN CELL BIOLOGY

IF4.3

2024-10-01

OAAI

Oji, Asami; Choubani, Linda; Miura, Hisashi; Hiratani, Ichiro

A feedback loop that drives cell death and proliferation and its defect in intestinal stem cells

LIFE SCIENCE ALLIANCE

IF2.9

2024-01-31

OAAI

Sulekh, Shivakshi; Ikegawa, Yuko; Naito, Saki; Oji, Asami; Hiratani, Ichiro; Yoo, Sa Kan

Replication dynamics identifies the folding principles of the inactive X chromosome

NATURE STRUCTURAL & MOLECULAR BIOLOGY

IF10.1

2023-08-10

OAAI

Poonperm, Rawin; Ichihara, Saya; Miura, Hisashi; Tanigawa, Akie; Nagao, Koji; Obuse, Chikashi; Sado, Takashi; Hiratani, Ichiro

Epigenetic plasticity safeguards heterochromatin configuration in mammals 表观遗传可塑性保护哺乳动物的异染色质构型

NUCLEIC ACIDS RESEARCH

IF13.1

2023-05-13

OAAI

Fukuda, Kei; Shimi, Takeshi; Shimura, Chikako; Ono, Takao; Suzuki, Takehiro; Onoue, Kenta; Okayama, Satoko; Miura, Hisashi; Hiratani, Ichiro; Ikeda, Kazuho; Okada, Yasushi; Dohmae, Naoshi; Yonemura, Shigenobu; Inoue, Azusa; Kimura, Hiroshi; Shinkai, Yoichi

Cell cycle dynamics and developmental dynamics of the 3D genome: toward linking the two timescales

CURRENT OPINION IN GENETICS & DEVELOPMENT

IF3.6

2022-04-01

OAAI

Miura, Hisashi; Hiratani, Ichiro

SAF-A promotes origin licensing and replication fork progression to ensure robust DNA replication

JOURNAL OF CELL SCIENCE

IF3.6

2022-01-24

OAAI

Connolly, Caitlin; Takahashi, Saori; Miura, Hisashi; Hiratani, Ichiro; Gilbert, Nick; Donaldson, Anne D.; Hiraga, Shin-Ichiro

Regulation of mammalian 3D genome organization and histone H3K9 dimethylation by H3K9 methyltransferases

COMMUNICATIONS BIOLOGY

IF5.1

2021-05-13

OAAI

Fukuda, Kei; Shimura, Chikako; Miura, Hisashi; Tanigawa, Akie; Suzuki, Takehiro; Dohmae, Naoshi; Hiratani, Ichiro; Shinkai, Yoichi

Dynamics of transcription-mediated conversion from euchromatin to facultative heterochromatin at the Xist promoter by Tsix

CELL REPORTS

IF6.9

2021-03-01

OAAI

Ohhata, Tatsuya; Yamazawa, Kazuki; Miura-Kamio, Asuka; Takahashi, Saori; Sakai, Satoshi; Tamura, Yuka; Uchida, Chiharu; Kitagawa, Kyoko; Niida, Hiroyuki; Hiratani, Ichiro; Kobayashi, Hisato; Kimura, Hiroshi; Wutz, Anton; Kitagawa, Masatoshi

The Temporal Order of DNA Replication Shaped by Mammalian DNA Methyltransferases

CELLS

IF5.2

2021-01-29

OAAI

Takebayashi, Shin-ichiro; Ryba, Tyrone; Wimbish, Kelsey; Hayakawa, Takuya; Sakaue, Morito; Kuriya, Kenji; Takahashi, Saori; Ogata, Shin; Hiratani, Ichiro; Okumura, Katsuzumi; Okano, Masaki; Ogata, Masato

Mapping replication timing domains genome wide in single mammalian cells with single-cell DNA replication sequencing

NATURE PROTOCOLS

IF16

2020-11-23

PREAI

Miura, Hisashi; Takahashi, Saori; Shibata, Takahiro; Nagao, Koji; Obuse, Chikashi; Okumura, Katsuzumi; Ogata, Masato; Hiratani, Ichiro; Takebayashi, Shin-ichiro

Microrheology for Hi-C Data Reveals the Spectrum of the Dynamic 3D Genome Organization

BIOPHYSICAL JOURNAL

IF3.1

2020-05-01

OAAI

Shinkai, Soya; Sugawara, Takeshi; Miura, Hisashi; Hiratani, Ichiro; Onami, Shuichi

Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?多方面的hi-c基准测试: 什么使染色体规模的基因组支架有所不同？

GIGASCIENCE

IF3.9

2020-01-10

OAAI

Kadota, Mitsutaka; Nishimura, Osamu; Miura, Hisashi; Tanaka, Kaori; Hiratani, Ichiro; Kuraku, Shigehiro

The Eleanor ncRNAs activate the topological domain of the ESR1 locus to balance against apoptosis

NATURE COMMUNICATIONS

IF15.7

2019-08-22

OAAI

Abdalla, Mohamed Osama Ali; Yamamoto, Tatsuro; Maehara, Kazumitsu; Nogami, Jumpei; Ohkawa, Yasuyuki; Miura, Hisashi; Poonperm, Rawin; Hiratani, Ichiro; Nakayama, Hideki; Nakao, Mitsuyoshi; Saitoh, Noriko

Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization

NATURE GENETICS

IF31.8

2019-08-12

PREAI

Miura, Hisashi; Takahashi, Saori; Poonperm, Rawin; Tanigawa, Akie; Takebayashi, Shin-ichiro; Hiratani, Ichiro

Genome-wide stability of the DNA replication program in single mammalian cells

NATURE GENETICS

IF31.8

2019-02-25

OAAI

Takahashi, Saori; Miura, Hisashi; Shibata, Takahiro; Nagao, Koji; Okumura, Katsuzumi; Ogata, Masato; Buses, Chikashi; Takebayashi, Shin-ichiro; Hiratani, Ichiro

Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs

NATURE COMMUNICATIONS

IF15.7

2018-04-11

OAAI

Ikeda, Takashi; Hikichi, Takafusa; Miura, Hisashi; Shibata, Hirofumi; Mitsunaga, Kanae; Yamada, Yosuke; Woltjen, Knut; Miyamoto, Kei; Hiratani, Ichiro; Yamada, Yasuhiro; Hotta, Akitsu; Yamamoto, Takuya; Okita, Keisuke; Masui, Shinji

研究方向