Heejung Shim - Publications, H-index & Citations

Heejung Shim

Faculty of Science

12H指数

54论文数

1.6K被引数

收录论文 9

发表时间

simPIC: flexible simulation of single-cell ATAC-seq paired-insertion counts from individuals to populations simPIC：从个体到群体灵活模拟单细胞ATAC-seq配对插入计数的软件

Genome Biology

IF9.4

2026-07-29

OAAI

Sagrika Chugh; Heejung Shim; Davis J. McCarthy

A hierarchical, count-based model highlights challenges in scATAC-seq data analysis and points to opportunities to extract finer-resolution information 一种基于计数的层级模型突出了scATAC-seq数据分析中的挑战，并指出了提取更高分辨率信息的机遇。

Genome Biology

IF9.4

2025-10-03

OAAI

Aaron Wing Cheung Kwok; Heejung Shim; Davis J. McCarthy

A paradoxical population structure of var DBLα types in Africa

PLOS PATHOGENS

IF4.9

2025-02-04

OAAI

Tan, Mun Hua; Tiedje, Kathryn E.; Feng, Qian; Zhan, Qi; Pascual, Mercedes; Shim, Heejung; Chan, Yao-ban; Day, Karen P.

Semi-Supervised Learning Under General Causal Models

IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS

IF8.9

2024-01-01

PREAI

Moore, Archer; Shim, Heejung; Zhu, Jingge; Gong, Mingming

sccomp: Robust differential composition and variability analysis for single- cell data sccomp: 单细胞数据的稳健差分组成和变异性分析

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2023-08-07

OAAI

Mangiola, Stefano; Roth-Schulze, Alexandra J.; Trussart, Marie; Zozaya-Valdes, Enrique; Ma, Mengyao; Gao, Zijie; Rubin, Alan F.; Speed, Terence P.; Shim, Heejung; Papenfuss, Anthony T.

Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE

GENOME BIOLOGY

IF9.4

2023-04-06

OAAI

You, Yupei; Prawer, Yair D. J.; De Paoli-Iseppi, Ricardo; Hunt, Cameron P. J.; Parish, Clare L.; Shim, Heejung; Clark, Michael B.

sgcocaller and comapr: personalised haplotype assembly and comparative crossover map analysis using single-gamete sequencing data

NUCLEIC ACIDS RESEARCH

IF13.1

2022-09-15

OAAI

Lyu, Ruqian; Tsui, Vanessa; Crismani, Wayne; Liu, Ruijie; Shim, Heejung; McCarthy, Davis J.

Promoter shape varies across populations and affects promoter evolution and expression noise

NATURE GENETICS

IF31.8

2017-02-13

PREAI

Schor, Ignacio E.; Degner, Jacob F.; Harnett, Dermot; Cannavo, Enrico; Casale, Francesco P.; Shim, Heejung; Garfield, David A.; Birney, Ewan; Stephens, Matthew; Stegle, Oliver; Furlong, Eileen E. M.

Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling

ELIFE

IF0

2016-05-27

117

OAAI

Raj, Anil; Wang, Sidney H.; Shim, Heejung; Harpak, Arbel; Li, Yang I.; Engelmann, Brett; Stephens, Matthew; Gilad, Yoav; Ptitchard, Jonathan K.

研究方向