Vincent Ranwez - Publications, H-index & Citations

Vincent Ranwez

umr agap institut

33H指数

134论文数

7.0K被引数

收录论文 25

发表时间

CDScompare: a frame-sensitive GFF comparison tool for improved detection of coding sequence discrepancies, with applications to wheat and rice annotations CDScompare：一种改进编码序列差异检测的框架敏感型GFF比较工具，应用于小麦和水稻注释

Plant Methods

IF4.4

2026-07-31

OAAI

Vincent Ranwez; Johanna Girodolle; Vétéa Jacot; Nathalie Chantret

Durum Wheat cv. Svevo Reference Genome Rel.2.0: A Comprehensive Tool for Wheat Genomics durum小麦品种Svevo参考基因组Rel.2.0：小麦基因组学的一个综合工具

Plant Biotechnology Journal

IF10.5

2026-07-28

OAAI

Elisabetta Mazzucotelli; Cristian Forestan; Gina Zastrow-Hayes; David Swarbreck; Yael Lev-Mirom; Emile Cavalet-Giorsa; Matteo Bozzoli; Anna Maria Mastrangelo; Daniela Marone; Vincent Ranwez; Johanna Girodolle; Victor Llaca; Kevin Fengler; Charlotte Harris; Helena Toegelová; Pavla Navrátilová; Primetta Faccioli; Francesca Desiderio; Ana Paola Valladares; Gemy Kaithakottil; Rachel L. Rusholme-Pilcher; Manuel Spannagl; Heidrun Gundlach; Klaus F. X. Mayer; Victoria C. Blake; Justin D. Faris; Steven S. Xu; Taner Z. Sen; Eric Yao; Julio Isidro y Sánchez; Chunyi Liu; Muhammad A. Farooq; Sandra Stefanelli; Chiara Cappucci; Leah Oren; Tamar Eilam; Mario Giorgioni; Alessandra Stella; Barbara Lazzari; Massimiliano Lauria; Aldo Ceriotti; Raul Pirona; Elahe Tavakol; Valentyna Klymiuk; Jennifer Ens; Harmeet Singh Chawla; Sean Walkowiak; Nicola Pecchioni; Filippo M. Bassi; Miguel Sanchez-Garcia; Gabriella Sonnante; Pasquale L. Curci; Giovanni Giuliano; Giuseppe Aprea; Asher Pasha; Agata Gadaleta; Ilaria Marcotuli; Stefania Masci; Francesco Sestili; Samuela Palombieri; Davide Scaglione; Michele Morgante; Hana Šimková; Nicholas J. Provart; Simon G. Krattinger; Curtis J. Pozniak; Nathalie Chantret; Anthony Hall; Assaf Distelfeld; Roberto Tuberosa; Marco Maccaferri; Luigi Cattivelli

Insights into the evolution, virulence and speciation of Babesia MO1 and Babesia divergens through multiomics analyses

EMERGING MICROBES & INFECTIONS

IF7.5

2024-09-01

OAAI

Singh, Pallavi; Vydyam, Pratap; Fang, Tiffany; Estrada, Karel; Gonzalez, Luis Miguel; Grande, Ricardo; Kumar, Madelyn; Chakravarty, Sakshar; Berry, Vincent; Ranwez, Vincent; Carcy, Bernard; Depoix, Delphine; Sanchez, Sergio; Cornillot, Emmanuel; Abel, Steven; Ciampossin, Loic; Lenz, Todd; Harb, Omar; Sanchez-Flores, Alejandro; Montero, Estrella; Le Roch, Karine G.; Lonardi, Stefano; Mamoun, Choukri Ben

Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives

EVOLUTION LETTERS

IF3.7

2024-08-12

OAAI

Burgarella, Concetta; Bremaud, Marie-Fleur; Von Hirschheydt, Gesa; Viader, Veronique; Ardisson, Morgane; Santoni, Sylvain; Ranwez, Vincent; de Navascues, Miguel; David, Jacques; Glemin, Sylvain

OrthoMaM v12: a database of curated single-copy ortholog alignments and trees to study mammalian evolutionary genomics

NUCLEIC ACIDS RESEARCH

IF13.1

2023-10-16

OAAI

Allio, Remi; Delsuc, Frederic; Belkhir, Khalid; Douzery, Emmanuel J. P.; Ranwez, Vincent; Scornavacca, Celine

Post-hoc recommendation explanations through an efficient exploitation of the DBpedia category hierarchy

KNOWLEDGE-BASED SYSTEMS

IF7.6

2022-06-01

OAAI

Du, Yu; Ranwez, Sylvie; Sutton-Charani, Nicolas; Ranwez, Vincent

Is diversity optimization always suitable? Toward a better understanding of diversity within recommendation approaches

INFORMATION PROCESSING & MANAGEMENT

IF6.9

2021-11-01

OAAI

Du, Yu; Ranwez, Sylvie; Sutton-Charani, Nicolas; Ranwez, Vincent

A new comprehensive annotation of leucine-rich repeat-containing receptors in rice

PLANT JOURNAL

IF5.7

2021-09-02

OAAI

Gottin, Celine; Dievart, Anne; Summo, Marilyne; Droc, Gaetan; Perin, Christophe; Ranwez, Vincent; Chantret, Nathalie

Pervasive hybridizations in the history of wheat relatives

SCIENCE ADVANCES

IF12.5

2019-05-03

OAAI

Glemin, Sylvain; Scornavacca, Celine; Dainat, Jacques; Burgarella, Concetta; Viader, Veronique; Ardisson, Morgane; Sarah, Gautier; Santoni, Sylvain; David, Jacques; Ranwez, Vincent

OrthoMaM v10: Scaling-Up Orthologous Coding Sequence and Exon Alignments with More than One Hundred Mammalian Genomes

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2019-01-29

OAAI

Scornavacca, Celine; Belkhir, Khalid; Lopez, Jimmy; Dernat, Remy; Delsuc, Frederic; Douzery, Emmanuel J. P.; Ranwez, Vincent

MACSE v2: Toolkit for the Alignment of Coding Sequences Accounting for Frameshifts and Stop Codons MACSE v2: 用于编码序列比对的工具包，用于编码移码和终止密码子

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2018-08-25

332

OAAI

Ranwez, Vincent; Douzery, Emmanuel J. P.; Cambon, Cedric; Chantret, Nathalie; Delsuc, Frederic

Fast and reliable inference of semantic clusters

KNOWLEDGE-BASED SYSTEMS

IF7.6

2016-11-01

OAAI

Fiorini, Nicolas; Harispe, Sebastien; Ranwez, Sylvie; Montmain, Jacky; Ranwez, Vincent

OrthoMaM v8: A Database of Orthologous Exons and Coding Sequences for Comparative Genomics in Mammals OrthoMaM v8: 用于哺乳动物比较基因组学的直系同源外显子和编码序列数据库

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2014-04-09

OAAI

Douzery, Emmanuel J. P.; Scornavacca, Celine; Romiguier, Jonathan; Belkhir, Khalid; Galtier, Nicolas; Delsuc, Frederic; Ranwez, Vincent

Evolutionary tinkering of the expression of PDFls suggests their joint effect on zinc tolerance and the response to pathogen attack PDFls表达的进化修补表明它们对锌耐受性和对病原体攻击的反应的联合作用

FRONTIERS IN PLANT SCIENCE

IF4.8

2014-03-11

OAAI

Nguyen, Nga N. T.; Ranwez, Vincent; Vile, Denis; Soulie, Marie-Christine; Dellagi, Alia; Expert, Dominique; Gosti, Franoise

Impact of recurrent gene duplication on adaptation of plant genomes

BMC PLANT BIOLOGY

IF4.8

2014-01-01

OAAI

Fischer, Iris; Dainat, Jacques; Ranwez, Vincent; Glemin, Sylvain; Dufayard, Jean-Francois; Chantret, Nathalie

Less Is More in Mammalian Phylogenomics: AT-Rich Genes Minimize Tree Conflicts and Unravel the Root of Placental Mammals

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2013-06-29

142

OAAI

Romiguier, Jonathan; Ranwez, Vincent; Delsuc, Frederic; Galtier, Nicolas; Douzery, Emmanuel J. P.

Subontology Extraction Using Hyponym and Hypernym Closure on is-a Directed Acyclic Graphs

IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

IF10.4

2012-12-01

OAAI

Ranwez, Vincent; Ranwez, Sylvie; Janaqi, Stefan

Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti†

NUCLEIC ACIDS RESEARCH

IF13.1

2012-07-24

182

OAAI

Cornillot, Emmanuel; Hadj-Kaddour, Kamel; Dassouli, Amina; Noel, Benjamin; Ranwez, Vincent; Vacherie, Benoit; Augagneur, Yoann; Bres, Virginie; Duclos, Aurelie; Randazzo, Sylvie; Carcy, Bernard; Debierre-Grockiego, Francoise; Delbecq, Stephane; Moubri-Menage, Karina; Shams-Eldin, Hosam; Usmani-Brown, Sahar; Bringaud, Frederic; Wincker, Patrick; Vivares, Christian P.; Schwarz, Ralph T.; Schetters, Theo P.; Krause, Peter J.; Gorenflot, Andre; Berry, Vincent; Barbe, Valerie; Ben Mamoun, Choukri

Efficient Selection of Branch-Specific Models of Sequence Evolution

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2012-02-02

OAAI

Dutheil, Julien Y.; Galtier, Nicolas; Romiguier, Jonathan; Douzery, Emmanuel J. P.; Ranwez, Vincent; Boussau, Bastien

Models, algorithms and programs for phylogeny reconciliation

BRIEFINGS IN BIOINFORMATICS

IF7.7

2011-09-22

113

OAAI

Doyon, Jean-Philippe; Ranwez, Vincent; Daubin, Vincent; Berry, Vincent

研究方向