Vladimír Berka - Publications, H-index & Citations

Vladimír Berka

university of texas system

35H指数

97论文数

3.7K被引数

收录论文 36

发表时间

Bi-directional allosteric pathway in NMDA receptor activation and modulation

NATURE COMMUNICATIONS

IF15.7

2024-10-13

OAAI

Bender, Paula A.; Chakraborty, Subhajit; Durham, Ryan J.; Berka, Vladimir; Carrillo, Elisa; Jayaraman, Vasanthi

Investigation of high-energy metastable state of the oxidized (OH) bovine cytochrome c oxidase: proton uptake and reaction with H2O2

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

IF2.7

2024-09-01

PREAI

Jancura, Daniel; Tomkova, Adriana; Sztachova, Tereza; Berka, Vladimir; Fabian, Marian

Neurogranin modulates the rate of association between calmodulin and target peptides

BIOPHYSICAL JOURNAL

IF3.1

2024-06-01

OAAI

Putkey, John A.; Hoffman, Laurel; Berka, Vladimir; Wang, Xu

Partial agonism in heteromeric GLUK2/GLUK5 kainate receptor

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2023-08-01

PREAI

Paudyal, Nabina; Das, Anindita; Carrillo, Elisa; Berka, Vladimir; Jayaraman, Vasanthi

Gating intermediates reveal inhibitory role of the voltage sensor in a cyclic nucleotide-modulated ion channel

NATURE COMMUNICATIONS

IF15.7

2022-11-14

OAAI

Gao, Xiaolong; Schmidpeter, Philipp A. M.; Berka, Vladimir; Durham, Ryan J.; Fan, Chen; Jayaraman, Vasanthi; Nimigean, Crina M.

Delta glutamate receptors are functional glycine- and D-serine-gated cation channels in situ

SCIENCE ADVANCES

IF12.5

2021-12-24

OAAI

Carrillo, Elisa; Gonzalez, Cuauhtemoc U.; Berka, Vladimir; Jayaraman, Vasanthi

Structural Arrangement Produced by Concanavalin A Binding to Homomeric GluK2 Receptors

MEMBRANES

IF3.6

2021-08-11

OAAI

Gonzalez, Cuauhtemoc U.; Carrillo, Elisa; Berka, Vladimir; Jayaraman, Vasanthi

A new paradigm for gaseous ligand selectivity of hemoproteins highlighted by soluble guanylate cyclase

JOURNAL OF INORGANIC BIOCHEMISTRY

IF3.2

2021-01-01

OAAI

Wu, Gang; Martin, Emil; Berka, Vladimir; Liu, Wen; Garcin, Elsa D.; Tsai, Ah-Lim

Allosteric Changes in the NMDA Receptor Associated with Calcium-Dependent Inactivation

BIOPHYSICAL JOURNAL

IF3.1

2020-12-01

OAAI

Bhatia, Nidhi Kaur; Carrillo, Elisa; Durham, Ryan J.; Berka, Vladimir; Jayaraman, Vasanthi

Conformational spread and dynamics in allostery of NMDA receptors NMDA受体变构中的构象分布和动力学

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2020-02-03

OAAI

Durham, Ryan J.; Paudyal, Nabina; Carrillo, Elisa; Bhatia, Nidhi Kaur; Maclean, David M.; Berka, Vladimir; Dolino, Drew M.; Gorfe, Alemayehu A.; Jayaraman, Vasanthi

Mechanism of modulation of AMPA receptors by TARP-γ8

JOURNAL OF GENERAL PHYSIOLOGY

IF2.9

2019-11-20

OAAI

Carrillo, Elisa; Shaikh, Sana A.; Berka, Vladimir; Durham, Ryan J.; Litwin, Douglas B.; Lee, Garam; MacLean, David M.; Nowak, Linda M.; Jayaraman, Vasanthi

Critical Comparison of the Superoxide Dismutase-like Activity of Carbon Antioxidant Nanozymes by Direct Superoxide Consumption Kinetic Measurements 通过直接超氧化物消耗动力学测量对碳抗氧化剂纳米酶的超氧化物歧化酶样活性进行关键比较

ACS NANO

IF16

2019-09-11

OAAI

Wu, Gang; Berka, Vladimir; Derry, Paul J.; Mendoza, Kimberly; Kakadiaris, Eugenia; Roy, Trenton; Kent, Thomas A.; Tour, James M.; Tsai, Ah-Lim

The structural arrangement at intersubunit interfaces in homomeric kainate receptors

SCIENTIFIC REPORTS

IF3.9

2019-05-06

OAAI

Litwin, Douglas B.; Carrillo, Elisa; Shaikh, Sana A.; Berka, Vladimir; Jayaraman, Vasanthi

Highly Oxidized Graphene Quantum Dots from Coal as Efficient Antioxidants 煤中高度氧化的石墨烯量子点作为高效抗氧化剂

ACS APPLIED MATERIALS & INTERFACES

IF8.2

2019-04-17

PREAI

Nilewski, Lizanne; Mendoza, Kimberly; Jalilov, Almaz S.; Berka, Vladimir; Wu, Gang; Sikkema, William K. A.; Metzger, Andrew; Ye, Ruquan; Zhang, Rui; Luong, Duy Xuan; Wang, Tuo; McHugh, Emily; Derry, Paul J.; Samuel, Errol Loic; Kent, Thomas A.; Tsai, Ah-Lim; Tour, James M.

The Structural Arrangement and Dynamics of Homomeric Kainate Receptors Determined by smFRET

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

PREAI

Litwin, Douglas B.; Carrillo, Elisa; Shaikh, Sana; Berka, Vladimir; Jayaraman, Vasanthi

Single-Molecule FRET Investigations of Negative Cooperativity in the NMDA Receptor

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Durham, Ryan J.; Paudyal, Nabina; Carrillo, Elisa; Berka, Vladimir; Jayaraman, Vasanthi

Catalytic oxidation and reduction reactions of hydrophilic carbon clusters with NADH and cytochrome C: features of an electron transport nanozyme

NANOSCALE

IF5.1

2019-01-01

OAAI

Derry, Paul J.; Nilewski, Lizanne G.; Sikkema, William K. A.; Mendoza, Kimberly; Jalilov, Almaz; Berka, Vladimir; McHugh, Emily A.; Tsai, Ah-Lim; Tour, James M.; Kent, Thomas A.

Single Molecule FRET Studies into the Effects of Sodium on Kainate Receptor Dynamics

BIOPHYSICAL JOURNAL

IF3.1

2018-02-01

PREAI

Litwin, Douglas; Shaikh, Sana; Berka, Vladimir; Jayaraman, Vasanthi

Structural and Functional Insight of Sphingosine 1-Phosphate-Mediated Pathogenic Metabolic Reprogramming in Sickle Cell Disease

SCIENTIFIC REPORTS

IF3.9

2017-11-10

OAAI

Sun, Kaiqi; D'Alessandro, Angelo; Ahmed, Mostafa H.; Zhang, Yujin; Song, Anren; Ko, Tzu-Ping; Nemkov, Travis; Reisz, Julie A.; Wu, Hongyu; Adebiyi, Morayo; Peng, Zhangzhe; Gong, Jing; Liu, Hong; Huang, Aji; Wen, Yuan Edward; Wen, Alexander Q.; Berka, Vladimir; Bogdanov, Mikhail V.; Abdulmalik, Osheiza; Han, Leng; Tsai, Ah-lim; Idowu, Modupe; Juneja, Harinder S.; Kellems, Rodney E.; Dowhan, William; Hansen, Kirk C.; Safo, Martin K.; Xia, Yang

Gaseous ligand selectivity of the H-NOX sensor protein from Shewanella oneidensis and comparison to those of other bacterial H-NOXs and soluble guanylyl cyclase

BIOCHIMIE

IF3

2017-09-01

OAAI

Wu, Gang; Liu, Wen; Berka, Vladimir; Tsai, Ah-lim

研究方向