未登录 Discovery of a novel bandavirus using metagenomic sequencing in a retrospective analysis of an unresolved 2020 mortality event involving wild black vultures in the northeastern United States 通过宏基因组测序在2020年美国东北部野生黑秃鹫不明死亡事件的回顾性分析中发现一种新型班达病毒 Mwakibete, Lusajo; Hoarau, Axel O. G.; Ahyong, Vida; Waltari, Eric; Bender, Susan J.; Davison, Sherrill; Niedringhaus, Kevin D.; Gibison, Michelle L.; Gagne, Roderick B.; Miller, Erica A.; Murphy, Lisa A.; Kistler, Amy L.; Tato, Cristina M. 分享 收藏
Detection, characterization, and phylogenetic analysis of novel astroviruses from endemic Malagasy fruit bats (vol 21, 195, 2024) Horigan, Sophia; Kettenburg, Gwenddolen; Kistler, Amy; Ranaivoson, Hafaliana C.; Andrianiaina, Angelo; Andry, Santino; Raharinosy, Vololoniaina; Randriambolamanantsoa, Tsiry Hasina; Tato, Cristina M.; Lacoste, Vincent; Heraud, Jean-Michel; Dussart, Philippe; Brook, Cara E. 分享 收藏
Detection, characterization, and phylogenetic analysis of novel astroviruses from endemic Malagasy fruit bats Horigan, Sophia; Kettenburg, Gwenddolen; Kistler, Amy; Ranaivoson, Hafaliana C.; Andrianiaina, Angelo; Andry, Santino; Raharinosy, Vololoniaina; Randriambolamanantsoa, Tsiry Hasina; Tato, Cristina M.; Lacoste, Vincent; Heraud, Jean-Michel; Dussart, Philippe; Brook, Cara E. 分享 收藏
Metatranscriptomic investigation of single Ixodes pacificus ticks reveals diverse microbes, viruses, and novel mRNA-like endogenous viral elements Martyn, Calla; Hayes, Beth M.; Lauko, Domokos; Midthun, Edward; Castaneda, Gloria; Bosco-Lauth, Angela; Salkeld, Daniel J.; Kistler, Amy; Pollard, Katherine S.; Chou, Seemay 分享 收藏
A 2-Gene Host Signature for Improved Accuracy of COVID-19 Diagnosis Agnostic to Viral Variants 一个2基因宿主签名，用于提高新型冠状病毒肺炎诊断的准确性，不可知病毒变异 Albright, Jack; Mick, Eran; Sanchez-Guerrero, Estella; Kamm, Jack; Mitchell, Anthea; Detweiler, Angela M.; Neff, Norma; Tsitsiklis, Alexandra; Hayakawa Serpa, Paula; Ratnasiri, Kalani; Havlir, Diane; Kistler, Amy; DeRisi, Joseph L.; Pisco, Angela Oliveira; Langelier, Charles R. 分享 收藏
Discovery and Genomic Characterization of a Novel Henipavirus, Angavokely Virus, from Fruit Bats in Madagascar Madera, Sharline; Kistler, Amy; Ranaivoson, Hafaliana C.; Ahyong, Vida; Andrianiaina, Angelo; Andry, Santino; Raharinosy, Vololoniaina; Randriambolamanantsoa, Tsiry H.; Ravelomanantsoa, Ny Anjara Fifi; Tato, Cristina M.; DeRisi, Joseph L.; Aguilar, Hector C.; Lacoste, Vincent; Dussart, Philippe; Heraud, Jean-Michel; Brook, Cara E. 分享 收藏
Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy Parikh, Victoria N.; Ioannidis, Alexander G.; Jimenez-Morales, David; Gorzynski, John E.; De Jong, Hannah N.; Liu, Xiran; Roque, Jonasel; Cepeda-Espinoza, Victoria P.; Osoegawa, Kazutoyo; Hughes, Chris; Sutton, Shirley C.; Youlton, Nathan; Joshi, Ruchi; Amar, David; Tanigawa, Yosuke; Russo, Douglas; Wong, Justin; Lauzon, Jessie T.; Edelson, Jacob; Montserrat, Daniel Mas; Kwon, Yongchan; Rubinacci, Simone; Delaneau, Olivier; Cappello, Lorenzo; Kim, Jaehee; Shoura, Massa J.; Raja, Archana N.; Watson, Nathaniel; Hammond, Nathan; Spiteri, Elizabeth; Mallempati, Kalyan C.; Montero-Martin, Gonzalo; Christle, Jeffrey; Kim, Jennifer; Kirillova, Anna; Seo, Kinya; Huang, Yong; Zhao, Chunli; Moreno-Grau, Sonia; Hershman, Steven G.; Dalton, Karen P.; Zhen, Jimmy; Kamm, Jack; Bhatt, Karan D.; Isakova, Alina; Morri, Maurizio; Ranganath, Thanmayi; Blish, Catherine A.; Rogers, Angela J.; Nadeau, Kari; Yang, Samuel; Blomkalns, Andra; O'Hara, Ruth; Neff, Norma F.; DeBoever, Christopher; Szalma, Sandor; Wheeler, Matthew T.; Gates, Christian M.; Farh, Kyle; Schroth, Gary P.; Febbo, Phil; DeSouza, Francis; Cornejo, Omar E.; Fernandez-Vina, Marcelo; Kistler, Amy; Palacios, Julia A.; Pinsky, Benjamin A.; Bustamante, Carlos D.; Rivas, Manuel A.; Ashley, Euan A. 分享 收藏
Anti-nucleocapsid antibody levels and pulmonary comorbid conditions are linked to post-COVID-19 syndrome Jia, Xiaolin; Lee, Alexandra S.; Manohar, Monali; Sindher, Sayantani B.; Ahuja, Neera; Artandi, Maja; Blish, Catherine A.; Blomkalns, Andra L.; Chang, Iris; Collins, William J.; Desai, Manisha; Din, Hena Naz; Do, Evan; Fernandes, Andrea; Geng, Linda N.; Rosenberg-Hasson, Yael; Mahoney, Megan Ruth; Glascock, Abigail L.; Chan, Lienna Y.; Fong, Sharon Y.; Biohub, Chan Zuckerberg; Phelps, Maira; Raeber, Olivia; Purington, Natasha; Roltgen, Katharina; Rogers, Angela J.; Snow, Theo; Wang, Taia T.; Solis, Daniel; Vaughan, Laura; Verghese, Michelle; Maecker, Holden; Wittman, Richard; Puri, Rajan; Kistler, Amy; Yang, Samuel; Boyd, Scott D.; Pinsky, Benjamin A.; Chinthrajah, Sharon; Nadeau, Kari C. 分享 收藏
Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children Mick, Eran; Tsitsiklis, Alexandra; Spottiswoode, Natasha; Caldera, Saharai; Serpa, Paula Hayakawa; Detweiler, Angela M.; Neff, Norma; Pisco, Angela Oliveira; Li, Lucy M.; Retallack, Hanna; Ratnasiri, Kalani; Williamson, Kayla M.; Soesanto, Victoria; Simoes, Eric A. F.; Smith, Christiana; Abuogi, Lisa; Kistler, Amy; Wagner, Brandie D.; DeRisi, Joseph L.; Ambroggio, Lilliam; Mourani, Peter M.; Langelier, Charles R. 分享 收藏
Using genomic epidemiology of SARS-CoV-2 to support contact tracing and public health surveillance in rural Humboldt County, California Stoddard, Gunnar; Black, Allison; Ayscue, Patrick; Lu, Dan; Kamm, Jack; Bhatt, Karan; Chan, Lienna; Kistler, Amy L.; Batson, Joshua; Detweiler, Angela; Tan, Michelle; Neff, Norma; DeRisi, Joseph L.; Corrigan, Jeremy 分享 收藏
Full Genome Nobecovirus Sequences From Malagasy Fruit Bats Define a Unique Evolutionary History for This Coronavirus Clade 来自马达加斯加果蝙蝠的全基因组nobecoovirus序列为该冠状病毒进化枝定义了独特的进化史 Kettenburg, Gwenddolen; Kistler, Amy; Ranaivoson, Hafaliana Christian; Ahyong, Vida; Andrianiaina, Angelo; Andry, Santino; DeRisi, Joseph L.; Gentles, Anecia; Raharinosy, Vololoniaina; Randriambolamanantsoa, Tsiry Hasina; Ravelomanantsoa, Ny Anjara Fifi; Tato, Cristina M.; Dussart, Philippe; Heraud, Jean-Michel; Brook, Cara E. 分享 收藏
Genomic Epidemiology and Transmission Dynamics of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Congregate Healthcare Facilities in Santa Clara County, California MacCannell, Tara; Batson, Joshua; Bonin, Brandon; Astha, K. C.; Quenelle, Rebecca; Strong, Betsy; Lin, Wen; Rudman, Sarah L.; Dynerman, David; Ayscue, Patrick; Han, George; Kistler, Amy; Villarino, Margarita Elsa 分享 收藏
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Estimation of Secondary Household Attack Rates for Emergent Spike L452R Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants Detected by Genomic Surveillance at a Community-Based Testing Site in San Francisco Peng, James; Liu, Jamin; Mann, Sabrina A.; Mitchell, Anthea M.; Laurie, Matthew T.; Sunshine, Sara; Pilarowski, Genay; Ayscue, Patrick; Kistler, Amy; Vanaerschot, Manu; Li, Lucy M.; McGeever, Aaron; Chow, Eric D.; Marquez, Carina; Nakamura, Robert; Rubio, Luis; Chamie, Gabriel; Jones, Diane; Jacobo, Jon; Rojas, Susana; Rojas, Susy; Tulier-Laiwa, Valerie; Black, Douglas; Martinez, Jackie; Naso, Jamie; Schwab, Joshua; Petersen, Maya; Havlir, Diane; DeRisi, Joseph 分享 收藏
Identification of a Polymorphism in the N Gene of SARS-CoV-2 That Adversely Impacts Detection by Reverse Transcription-PCR Vanaerschot, Manu; Mann, Sabrina A.; Webber, James T.; Kamm, Jack; Bell, Sidney M.; Bell, John; Hong, Si Noon; Minh Phuong Nguyen; Chan, Lienna Y.; Bhatt, Karan D.; Tan, Michelle; Detweiler, Angela M.; Espinosa, Alex; Wu, Wesley; Batson, Joshua; Dynerman, David; Wadford, Debra A.; Puschnik, Andreas S.; Neff, Norma; Ahyong, Vida; Miller, Steve; Ayscue, Patrick; Tato, Cristina M.; Paul, Simon; Kistler, Amy L.; DeRisi, Joseph L.; Crawford, Emily D. 分享 收藏
Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses Mick, Eran; Kamm, Jack; Pisco, Angela Oliveira; Ratnasiri, Kalani; Babik, Jennifer M.; Castaneda, Gloria; DeRisi, Joseph L.; Detweiler, Angela M.; Hao, Samantha L.; Kangelaris, Kirsten N.; Kumar, G. Renuka; Li, Lucy M.; Mann, Sabrina A.; Neff, Norma; Prasad, Priya A.; Serpa, Paula Hayakawa; Shah, Sachin J.; Spottiswoode, Natasha; Tan, Michelle; Calfee, Carolyn S.; Christenson, Stephanie A.; Kistler, Amy; Langelier, Charles 分享 收藏
Rapid deployment of SARS-CoV-2 testing: The CLIAHUB Crawford, Emily D.; Acosta, Irene; Ahyong, Vida; Anderson, Erika C.; Arevalo, Shaun; Asarnow, Daniel; Axelrod, Shannon; Ayscue, Patrick; Azimi, Camillia S.; Azumaya, Caleigh M.; Bachl, Stefanie; Bachmutsky, Iris; Bhaduri, Aparna; Brown, Jeremy Bancroft; Batson, Joshua; Behnert, Astrid; Boileau, Ryan M.; Bollam, Saumya R.; Bonny, Alain R.; Booth, David; Borja, Michael Jerico B.; Brown, David; Buie, Bryan; Burnett, Cassandra E.; Byrnes, Lauren E.; Cabral, Katelyn A.; Cabrera, Joana P.; Caldera, Saharai; Canales, Gabriela; Castaneda, Gloria R.; Chan, Agnes Protacio; Chang, Christopher R.; Charles-Orszag, Arthur; Cheung, Carly; Chio, Unseng; Chow, Eric D.; Citron, Y. Rose; Cohen, Allison; Cohn, Lillian B.; Chiu, Charles; Cole, Mitchel A.; Conrad, Daniel N.; Constantino, Angela; Cote, Andrew; Crayton-Hall, Tre'jon; Darmanis, Spyros; Detweiler, Angela M.; Dial, Rebekah L.; Dong, Shen; Duarte, Elias M.; Dynerman, David; Egger, Rebecca; Fanton, Alison; Frumm, Stacey M.; Fu, Becky Xu Hua; Garcia, Valentina E.; Garcia, Julie; Gladkova, Christina; Goldman, Miriam; Gomez-Sjoberg, Rafael; Gordon, M. Grace; Grove, James C. R.; Gupta, Shweta; Haddjeri-Hopkins, Alexis; Hadley, Pierce; Haliburton, John; Hao, Samantha L.; Hartoularos, George; Herrera, Nadia; Hilberg, Melissa; Ho, Kit Ying E.; Hoppe, Nicholas; Hosseinzadeh, Shayan; Howard, Conor J.; Hussmann, Jeffrey A.; Hwang, Elizabeth; Ingebrigtsen, Danielle; Jackson, Julia R.; Jowhar, Ziad M.; Kain, Danielle; Kim, James Y. S.; Kistler, Amy; Kreutzfeld, Oriana; Kulsuptrakul, Jessie; Kung, Andrew F.; Langelier, Charles; Laurie, Matthew T.; Lee, Lena; Leng, Kun; Leon, Kristoffer E.; Leonetti, Manuel D.; Levan, Sophia R.; Li, Sam; Li, Aileen W.; Liu, Jamin; Lubin, Heidi S.; Lyden, Amy; Mann, Jennifer; Mann, Sabrina; Margulis, Gorica; Marquez, Diana M.; Marsh, Bryan P.; Martyn, Calla; McCarthy, Elizabeth E.; McGeever, Aaron; Merriman, Alexander F.; Meyer, Lauren K.; Miller, Steve; Moore, Megan K.; Mowery, Cody T.; Mukhtar, Tanzila; Mwakibete, Lusajo L.; Narez, Noelle; Neff, Norma F.; Osso, Lindsay A.; Oviedo, Diter; Peng, Suping; Phelps, Maira; Phong, Kiet; Picard, Peter; Pieper, Lindsey M.; Pincha, Neha; Pisco, Angela Oliveira; Pogson, Angela; Pourmal, Sergei; Puccinelli, Robert R.; Puschnik, Andreas S.; Rackaityte, Elze; Raghavan, Preethi; Raghavan, Madhura; Reese, James; Replogle, Joseph M.; Retallack, Hanna; Reyes, Helen; Rose, Donald; Rosenberg, Marci F.; Sanchez-Guerrero, Estella; Sattler, Sydney M.; Savy, Laura; See, Stephanie K.; Sellers, Kristin K.; Serpa, Paula Hayakawa; Sheehy, Maureen; Sheu, Jonathan; Silas, Sukrit; Streithorst, Jessica A.; Strickland, Jack; Stryke, Doug; Sunshine, Sara; Suslow, Peter; Sutanto, Renaldo; Tamura, Serena; Tan, Michelle; Tan, Jiongyi; Tang, Alice; Tato, Cristina M.; Taylor, Jack C.; Tenvooren, Iliana; Thompson, Erin M.; Thornborrow, Edward C.; Tse, Eric; Tung, Tony; Turner, Marc L.; Turner, Victoria S.; Turnham, Rigney E.; Turocy, Mary J.; Vaidyanathan, Trisha V.; Vainchtein, Ilia D.; Vanaerschot, Manu; Vazquez, Sara E.; Wandler, Anica M.; Wapniarski, Anne; Webber, James T.; Weinberg, Zara Y.; Westbrook, Alexandra; Wong, Allison W.; Wong, Emily; Worthington, Gajus; Xie, Fang; Xu, Albert; Yamamoto, Terrina; Yang, Ying; Yarza, Fauna; Zaltsman, Yefim; Zheng, Tina; DeRisi, Joseph L. 分享 收藏
Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19 Shah, Sachin J.; Barish, Peter N.; Prasad, Priya A.; Kistler, Amy; Neff, Norma; Kamm, Jack; Li, Lucy M.; Chiu, Charles Y.; Babik, Jennifer M.; Fang, Margaret C.; Abe-Jones, Yumiko; Alipanah, Narges; Alvarez, Francisco N.; Botvinnik, Olga Borisovna; Castaneda, Gloria; Dadasovich, Rand M.; Davis, Jennifer; Deng, Xianding; DeRisi, Joseph L.; Detweiler, Angela M.; Federman, Scot; Haliburton, John; Hao, Samantha; Kerkhoff, Andrew D.; Kumar, G. Renuka; Malcolm, Katherine B.; Mann, Sabrina A.; Martinez, Sandra; Mary, Rupa K.; Mick, Eran; Mwakibete, Lusajo; Najafi, Nader; Peluso, Michael J.; Phelps, Maira; Pisco, Angela Oliveira; Ratnasiri, Kalani; Rubio, Luis A.; Sellas, Anna; Sherwood, Kyla D.; Sheu, Jonathan; Spottiswoode, Natasha; Tan, Michelle; Yu, Guixia; Kangelaris, Kirsten Neudoerffer; Langelier, Charles 分享 收藏
Community Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 Disproportionately Affects the Latinx Population During Shelter-in-Place in San Francisco Chamie, Gabriel; Marquez, Carina; Crawford, Emily; Peng, James; Petersen, Maya; Schwab, Daniel; Schwab, Joshua; Martinez, Jackie; Jones, Diane; Black, Douglas; Gandhi, Monica; Kerkhoff, Andrew D.; Jain, Vivek; Sergi, Francesco; Jacobo, Jon; Rojas, Susana; Tulier-Laiwa, Valerie; Gallardo-Brown, Tracy; Appa, Ayesha; Chiu, Charles; Rodgers, Mary; Hackett, John Jr Jr; Kistler, Amy; Hao, Samantha; Kamm, Jack; Dynerman, David; Batson, Joshua; Greenhouse, Bryan; DeRisi, Joe; Havlir, Diane, V 分享 收藏
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