Devlina Chakravarty - Publications, H-index & Citations

Devlina Chakravarty

csir - national physical laboratory (npl)

17H指数

44论文数

1.3K被引数

收录论文 14

发表时间

Sequence clustering confounds AlphaFold2 序列聚类使AlphaFold2复杂化

NATURE

IF48.5

2025-02-19

OAAI

Schafer, Joseph W.; Lee, Myeongsang; Chakravarty, Devlina; Thole, Joseph F.; Chen, Ethan A.; Porter, Lauren L.

Proteins with alternative folds reveal blind spots in AlphaFold-based protein structure prediction 具有替代折叠的蛋白质揭示了基于AlphaFold的蛋白质结构预测中的盲点

CURRENT OPINION IN STRUCTURAL BIOLOGY

IF7

2025-02-01

OAAI

Chakravarty, Devlina; Lee, Myeongsang; Porter, Lauren L.

AlphaFold predictions of fold-switched conformations are driven by structure memorization

NATURE COMMUNICATIONS

IF15.7

2024-08-24

OAAI

Chakravarty, Devlina; Schafer, Joseph W.; Chen, Ethan A.; Thole, Joseph F.; Ronish, Leslie A.; Lee, Myeongsang; Porter, Lauren L.

Identification of a covert evolutionary pathway between two protein folds

NATURE COMMUNICATIONS

IF15.7

2023-06-01

OAAI

Chakravarty, Devlina; Sreenivasan, Shwetha; Swint-Kruse, Liskin; Porter, Lauren L.

From the hydrophobic core to the globular-disorder interface: New challenges and insights into protein design

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2023-02-06

OAAI

Basu, Sankar; Chakravarty, Devlina; Hou, Qingzhen; Uversky, Vladimir N.

Intrinsically disordered proteins/regions and insight into their biomolecular interactions 内在无序的蛋白质/区域及其对生物分子相互作用的洞察

BIOPHYSICAL CHEMISTRY

IF2.2

2022-04-01

PREAI

Chakrabarti, Pinak; Chakravarty, Devlina

How to choose templates for modeling of protein complexes: Insights from benchmarking template-based docking 如何选择蛋白质复合物建模的模板: 基于模板的对接基准的见解

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2020-02-07

OAAI

Chakravarty, Devlina; McElfresh, G. W.; Kundrotas, Petras J.; Vakser, Ilya A.

Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2019-10-25

OAAI

Lensink, Marc F.; Brysbaert, Guillaume; Nadzirin, Nurul; Velankar, Sameer; Chaleil, Raphael A. G.; Gerguri, Tereza; Bates, Paul A.; Laine, Elodie; Carbone, Alessandra; Grudinin, Sergei; Kong, Ren; Liu, Ran-Ran; Xu, Xi-Ming; Shi, Hang; Chang, Shan; Eisenstein, Miriam; Karczynska, Agnieszka; Czaplewski, Cezary; Lubecka, Emilia; Lipska, Agnieszka; Krupa, Pawel; Mozolewska, Magdalena; Golon, Lukasz; Samsonov, Sergey; Liwo, Adam; Crivelli, Silvia; Pages, Guillaume; Karasikov, Mikhail; Kadukova, Maria; Yan, Yumeng; Huang, Sheng-You; Rosell, Mireia; Rodriguez-Lumbreras, Luis A.; Romero-Durana, Miguel; Diaz-Bueno, Lucia; Fernandez-Recio, Juan; Christoffer, Charles; Terashi, Genki; Shin, Woong-Hee; Aderinwale, Tunde; Maddhuri Venkata Subraman, Sai Raghavendra; Kihara, Daisuke; Kozakov, Dima; Vajda, Sandor; Porter, Kathryn; Padhorny, Dzmitry; Desta, Israel; Beglov, Dmitri; Ignatov, Mikhail; Kotelnikov, Sergey; Moal, Iain H.; Ritchie, David W.; de Beauchene, Isaure Chauvot; Maigret, Bernard; Devignes, Marie-Dominique; Echartea, Maria E. Ruiz; Barradas-Bautista, Didier; Cao, Zhen; Cavallo, Luigi; Oliva, Romina; Cao, Yue; Shen, Yang; Baek, Minkyung; Park, Taeyong; Woo, Hyeonuk; Seok, Chaok; Braitbard, Merav; Bitton, Lirane; Scheidman-Duhovny, Dina; Dapkunas, Justas; Olechnovic, Kliment; Venclovas, Ceslovas; Kundrotas, Petras J.; Belkin, Saveliy; Chakravarty, Devlina; Badal, Varsha D.; Vakser, Ilya A.; Vreven, Thom; Vangaveti, Sweta; Borrman, Tyler; Weng, Zhiping; Guest, Johnathan D.; Gowthaman, Ragul; Pierce, Brian G.; Xu, Xianjin; Duan, Rui; Qiu, Liming; Hou, Jie; Merideth, Benjamin Ryan; Ma, Zhiwei; Cheng, Jianlin; Zou, Xiaoqin; Koukos, Panos I.; Roel-Touris, Jorge; Ambrosetti, Francesco; Geng, Cunliang; Schaarschmidt, Jorg; Trellet, Mikael E.; Melquiond, Adrien S. J.; Xue, Li; Jimenez-Garcia, Brian; van Noort, Charlotte W.; Honorato, Rodrigo V.; Bonvin, Alexandre M. J. J.; Wodak, Shoshana J.

Structural changes in DNA-binding proteins on complexation

NUCLEIC ACIDS RESEARCH

IF13.1

2018-03-09

OAAI

Poddar, Sayan; Chakravarty, Devlina; Chakrabarti, Pinak

Determining the roles of a conserved tyrosine residue in a Mip-like peptidyl-prolyl cis-trans isomerase

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

IF8.5

2016-06-01

PREAI

Polley, Soumitra; Chakravarty, Devlina; Chakrabarti, Gopal; Sau, Subrata