Thomas MacCarthy - Publications, H-index & Citations

Thomas MacCarthy

state university of new york (suny) system

22H指数

98论文数

1.4K被引数

收录论文 27

发表时间

Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity

ELIFE

IF0

2024-06-18

OAAI

Jing, Zhixin; Galbo, Phillip; Ovando, Luis; Demouth, Megan; Welte, Skylar; Park, Rosa; Chandran, Kartik; Wu, Yinghao; MacCarthy, Thomas; Zheng, Deyou; Fooksman, David

Interpretable deep learning reveals the role of an E-box motif in suppressing somatic hypermutation of AGCT motifs within human immunoglobulin variable regions

FRONTIERS IN IMMUNOLOGY

IF5.9

2024-05-28

OAAI

Tambe, Abhik; MacCarthy, Thomas; Pavri, Rushad

Single-cell transcriptomic analysis reveals both shared and separate functions for GATA6 and KRT17 in pancreatic cancer

CANCER RESEARCH

IF16.6

2024-01-16

PREAI

Nelson, Brian J.; Marchenko, Natalie; Escobar-Hoyos, Luisa F.; Shroyer, Kenneth; Powers, Scott; MacCarthy, Thomas

Modular cytosine base editing promotes epigenomic and genomic modifications

NUCLEIC ACIDS RESEARCH

IF13.1

2023-11-22

OAAI

Weischedel, Julian; Higgins, Laurence; Rogers, Sally; Gramalla-Schmitz, Anna; Wyrzykowska, Paulina; Borgoni, Simone; Maccarthy, Thomas; Chahwan, Richard

Evolutionary potential of the monkeypox genome arising from interactions with human APOBEC3 enzymes

VIRUS EVOLUTION

IF4

2023-08-02

OAAI

Delamonica, Brenda; Davalos, Liliana; Larijani, Mani; Anthony, Simon J.; Liu, Jia; MacCarthy, Thomas

Beta human papillomavirus 8E6 promotes alternative end joining

ELIFE

IF0

2023-01-24

OAAI

Hu, Changkun; Bugbee, Taylor; Palinski, Rachel; Akinyemi, Ibukun A.; McIntosh, Michael T.; MacCarthy, Thomas; Bhaduri-McIntosh, Sumita; Wallace, Nicholas; Heyer, Wolf-Dietrich

Role of EXO1 nuclease activity in genome maintenance, the immune response and tumor suppression in Exo1D173A mice

NUCLEIC ACIDS RESEARCH

IF13.1

2022-07-18

OAAI

Wang, Shanzhi; Lee, Kyeryoung; Gray, Stephen; Zhang, Yongwei; Tang, Catherine; Morrish, Rikke B.; Tosti, Elena; van Oers, Johanna; Amin, Mohammad Ruhul; Cohen, Paula E.; MacCarthy, Thomas; Roa, Sergio; Scharff, Matthew D.; Edelmann, Winfried; Chahwan, Richard

The role of HIRA-dependent H3.3 deposition and its modifications in the somatic hypermutation of immunoglobulin variable regions HIRA依赖性H3.3沉积及其修饰在免疫球蛋白可变区体细胞高突变中的作用

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2021-12-06

OAAI

Yu, Guojun; Zhang, Yongwei; Gupta, Varun; Zhang, Jinghang; MacCarthy, Thomas; Duan, Zhi; Scharff, Matthew D.

Role of Dot1L and H3K79 methylation in regulating somatic hypermutation of immunoglobulin genes Dot1L和H3K79甲基化在调节免疫球蛋白基因体细胞高突变中的作用

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2021-07-12

OAAI

Duan, Zhi; Baughn, Linda B.; Wang, Xiaohua; Zhang, Yongwei; Gupta, Varun; MacCarthy, Thomas; Scharff, Matthew D.; Yu, Guojun

Post-Transformation IGHV-IGHD-IGHJ Mutations in Chronic Lymphocytic Leukemia B Cells: Implications for Mutational Mechanisms and Impact on Clinical Course

FRONTIERS IN ONCOLOGY

IF3.3

2021-05-25

OAAI

Bagnara, Davide; Tang, Catherine; Brown, Jennifer R.; Kasar, Siddha; Fernandes, Stacey; Colombo, Monica; Vergani, Stefano; Mazzarello, Andrea N.; Ghiotto, Fabio; Bruno, Silvia; Morabito, Fortunato; Rai, Kanti R.; Kolitz, Jonathan E.; Barrientos, Jacqueline C.; Allen, Steven L.; Fais, Franco; Scharff, Matthew D.; MacCarthy, Thomas; Chiorazzi, Nicholas

Characterization of DNA G-Quadruplex Structures in Human Immunoglobulin Heavy Variable (IGHV) Genes

FRONTIERS IN IMMUNOLOGY

IF5.9

2021-05-10

OAAI

Tang, Catherine; MacCarthy, Thomas

Mutational pressure by host APOBEC3s more strongly affects genes expressed early in the lytic phase of herpes simplex virus-1 (HSV-1) and human polyomavirus (HPyV) infection

PLOS PATHOGENS

IF4.9

2021-04-30

OAAI

Shapiro, Maxwell; Krug, Laurie T.; MacCarthy, Thomas

Correlations in Somatic Hypermutation Between Sites in IGHV Genes Can Be Explained by Interactions Between AID and/or Polη Hotspots

FRONTIERS IN IMMUNOLOGY

IF5.9

2021-02-02

OAAI

Krantsevich, Artem; Tang, Catherine; MacCarthy, Thomas

STAT3 impartsBRCAness by impairing homologous recombination repair in Epstein-Barr virus-transformed B lymphocytes

PLOS PATHOGENS

IF4.9

2020-10-01

OAAI

McIntosh, Michael T.; Koganti, Siva; Boatwright, J. Lucas; Li, Xiaofan; Spadaro, Salvatore V.; Brantly, Alexis C.; Ayers, Jasmine B.; Perez, Ramon D.; Burton, Eric M.; Burgula, Sandeepta; MacCarthy, Thomas; Bhaduri-McIntosh, Sumita

AID Overlapping and Polη Hotspots Are Key Features of Evolutionary Variation Within the Human Antibody Heavy Chain (IGHV) Genes

FRONTIERS IN IMMUNOLOGY

IF5.9

2020-04-30

OAAI

Tang, Catherine; Bagnara, Davide; Chiorazzi, Nicholas; Scharff, Matthew D.; MacCarthy, Thomas

Evolutionary effects of the AID/APOBEC family of mutagenic enzymes on human gamma-herpesviruses AID/APOBEC诱变酶家族对人类 γ 疱疹病毒的进化影响

VIRUS EVOLUTION

IF4

2019-02-11

OAAI

Martinez, Teresa; Shapiro, Maxwell; Bhaduri-McIntosh, Sumita; MacCarthy, Thomas

Combinatorial Loss of the Enzymatic Activities of Viral Uracil-DNA Glycosylase and Viral dUTPase Impairs Murine Gammaherpesvirus Pathogenesis and Leads to Increased Recombination-Based Deletion in the Viral Genome

MBIO

IF4.7

2018-11-07

OAAI

Dong, Qiwen; Smith, Kyle R.; Oldenburg, Darby G.; Shapiro, Maxwell; Schutt, William R.; Malik, Laraib; Plummer, Joshua B.; Mu, Yunxiang; MacCarthy, Thomas; White, Douglas W.; McBride, Kevin M.; Krug, Laurie T.

DNA polymerase ι functions in the generation of tandem mutations during somatic hypermutation of antibody genes

JOURNAL OF EXPERIMENTAL MEDICINE

IF10.6

2016-07-25

OAAI

Maul, Robert W.; MacCarthy, Thomas; Frank, Ekaterina G.; Donigan, Katherine A.; McLenigan, Mary P.; Yang, William; Saribasak, Huseyin; Huston, Donald E.; Lange, Sabine S.; Woodgate, Roger; Gearhart, Patricia J.

Chronic lymphocytic leukemia cells diversify and differentiate in vivo via a nonclassical Th1-dependent, Bcl-6-deficient process

JCI INSIGHT

IF6.1

2016-04-07

OAAI

Patten, Piers E. M.; Ferrer, Gerardo; Chen, Shih-Shih; Simone, Rita; Marsilio, Sonia; Yan, Xiao-Jie; Gitto, Zachary; Yuan, Chaohui; Kolitz, Jonathan E.; Barrientos, Jacqueline; Allen, Steven L.; Rai, Kanti R.; MacCarthy, Thomas; Chu, Charles C.; Chiorazzi, Nicholas

Cancer as the Disintegration of Robustness Population-Level Variance in Gene Expression Identifies Key Differences Between Tobacco- and HPV-Associated Oropharyngeal Carcinogenesis

ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE

IF3.2

2015-07-01

OAAI

Ben-Dayan, Miriam M.; MacCarthy, Thomas; Schlecht, Nicolas F.; Belbin, Thomas J.; Childs, Geoffrey; Smith, Richard V.; Prystowsky, Michael B.; Bergman, Aviv

研究方向