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收藏The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars
Salojaervi, Jarkko; Rambani, Aditi; Yu, Zhe; Guyot, Romain; Strickler, Susan; Lepelley, Maud; Wang, Cui; Rajaraman, Sitaram; Rastas, Pasi; Zheng, Chunfang; Munoz, Daniella Santos; Meidanis, Joao; Paschoal, Alexandre Rossi; Bawin, Yves; Krabbenhoft, Trevor J.; Wang, Zhen Qin; Fleck, Steven J.; Aussel, Rudy; Bellanger, Laurence; Charpagne, Aline; Fournier, Coralie; Kassam, Mohamed; Lefebvre, Gregory; Metairon, Sylviane; Moine, Deborah; Rigoreau, Michel; Stolte, Jens; Hamon, Perla; Couturon, Emmanuel; Tranchant-Dubreuil, Christine; Mukherjee, Minakshi; Lan, Tianying; Engelhardt, Jan; Stadler, Peter; Correia De Lemos, Samara Mireza; Suzuki, Suzana Ivamoto; Sumirat, Ucu; Wai, Ching Man; Dauchot, Nicolas; Orozco-Arias, Simon; Garavito, Andrea; Kiwuka, Catherine; Musoli, Pascal; Nalukenge, Anne; Guichoux, Erwan; Reinout, Havinga; Smit, Martin; Carretero-Paulet, Lorenzo; Filho, Oliveiro Guerreiro; Braghini, Masako Toma; Padilha, Lilian; Sera, Gustavo Hiroshi; Ruttink, Tom; Henry, Robert; Marraccini, Pierre; van de Peer, Yves; Andrade, Alan; Domingues, Douglas; Giuliano, Giovanni; Mueller, Lukas; Pereira, Luiz Filipe; Plaisance, Stephane; Poncet, Valerie; Rombauts, Stephane; Sankoff, David; Albert, Victor A.; Crouzillat, Dominique; de Kochko, Alexandre; Descombes, Patrick 分享 收藏 分享 收藏 Buxus and Tetracentron genomes help resolve eudicot genome historyBuxus和Tetracentron基因组有助于解决eudicot基因组历史Chanderbali, Andre S.; Jin, Lingling; Xu, Qiaoji; Zhang, Yue; Zhang, Jingbo; Jian, Shuguang; Carroll, Emily; Sankoff, David; Albert, Victor A.; Howarth, Dianella G.; Soltis, Douglas E.; Soltis, Pamela S. 分享 收藏 Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivarsHu, Guibing; Feng, Junting; Xiang, Xu; Wang, Jiabao; Salojarvi, Jarkko; Liu, Chengming; Wu, Zhenxian; Zhang, Jisen; Liang, Xinming; Jiang, Zide; Liu, Wei; Ou, Liangxi; Li, Jiawei; Fan, Guangyi; Mai, Yingxiao; Chen, Chengjie; Zhang, Xingtan; Zheng, Jiakun; Zhang, Yanqing; Peng, Hongxiang; Yao, Lixian; Wai, Ching Man; Luo, Xinping; Fu, Jiaxin; Tang, Haibao; Lan, Tianying; Lai, Biao; Sun, Jinhua; Wei, Yongzan; Li, Huanling; Chen, Jiezhen; Huang, Xuming; Yan, Qian; Liu, Xin; McHale, Leah K.; Rolling, William; Guyot, Romain; Sankoff, David; Zheng, Chunfang; Albert, Victor A.; Ming, Ray; Chen, Houbin; Xia, Rui; Li, Jianguo 分享 收藏 分享 收藏 分享 收藏 分享 收藏 The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatibleHao, Yue; Mabry, Makenzie E.; Edger, Patrick P.; Freeling, Michael; Zheng, Chunfang; Jin, Lingling; VanBuren, Robert; Colle, Marivi; An, Hong; Abrahams, R. Shawn; Washburn, Jacob D.; Qi, Xinshuai; Barry, Kerrie; Daum, Christopher; Shu, Shengqiang; Schmutz, Jeremy; Sankoff, David; Barker, Michael S.; Lyons, Eric; Pires, J. Chris; Conant, Gavin C. 分享 收藏 Genome sequence and evolution of Betula platyphyllaChen, Su; Wang, Yucheng; Yu, Lili; Zheng, Tao; Wang, Sui; Yue, Zhen; Jiang, Jing; Kumari, Sapna; Zheng, Chunfang; Tang, Ibao; Li, Jun; Li, Yuqi; Chen, Jiongjiong; Zhang, Wenbo; Kuang, Hanhui; Robertson, Jon S.; Zhao, Patrick X.; Li, Huiyu; Shu, Shengqiang; Yordanov, Yordan S.; Huang, Haijiao; Goodstein, David M.; Gai, Ying; Qi, Qi; Min, JiuMeng; Xu, ChunYan; Wang, SongBo; Qu, Guan-Zheng; Paterson, Andrew H.; Sankoff, David; Wei, Hairong; Liu, Guifeng; Yang, Chuanping 分享 收藏 A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome高邻接的芸苔属黑种基因组定位了活跃的着丝粒并定义了祖先的芸苔属基因组Perumal, Sampath; Koh, Chu Shin; Jin, Lingling; Buchwaldt, Miles; Higgins, Erin E.; Zheng, Chunfang; Sankoff, David; Robinson, Stephen J.; Kagale, Sateesh; Navabi, Zahra-Katy; Tang, Lily; Horner, Kyla N.; He, Zhesi; Bancroft, Ian; Chalhoub, Boulos; Sharpe, Andrew G.; Parkin, Isobel A. P. 分享 收藏 The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptationRendon-Anaya, Martha; Ibarra-Laclette, Enrique; Mendez-Bravo, Alfonso; Lan, Tianying; Zheng, Chunfang; Carretero-Paulet, Lorenzo; Anahi Perez-Torres, Claudia; Chacon-Lopez, Alejandra; Hernandez-Guzman, Gustavo; Chang, Tien-Hao; Farr, Kimberly M.; Barbazuk, W. Brad; Chamala, Srikar; Mutwil, Marek; Shivhare, Devendra; Alvarez-Ponce, David; Mitter, Neena; Hayward, Alice; Fletcher, Stephen; Rozas, Julio; Sanchez Gracia, Alejandro; Kuhn, David; Barrientos-Priego, Alejandro F.; Salojarvi, Jarkko; Librado, Pablo; Sankoff, David; Herrera-Estrella, Alfredo; Albert, Victor A.; Herrera-Estrella, Luis 分享 收藏 分享 收藏 Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L (vol 50, pg 1565, 2018)Zhang, Jisen; Zhang, Xingtan; Tang, Haibao; Zhang, Qing; Hua, Xiuting; Ma, Xiaokai; Zhu, Fan; Jones, Tyler; Zhu, Xinguang; Bowers, John; Wai, Ching Man; Zheng, Chunfang; Shi, Yan; Chen, Shuai; Xu, Xiuming; Yue, Jingjing; Nelson, David R.; Huang, Lixian; Li, Zhen; Xu, Huimin; Zhou, Dong; Wang, Yongjun; Hu, Weichang; Lin, Jishan; Deng, Youjin; Pandey, Neha; Mancini, Melina; Zerpa, Dessiree; Nguyen, Julie K.; Wang, Liming; Yu, Liang; Xin, Yinghui; Ge, Liangfa; Arro, Jie; Han, Jennifer O.; Chakrabarty, Setu; Pushko, Marija; Zhang, Wenping; Ma, Yanhong; Ma, Panpan; Lv, Mingju; Chen, Faming; Zheng, Guangyong; Xu, Jingsheng; Yang, Zhenhui; Deng, Fang; Chen, Xuequn; Liao, Zhenyang; Zhang, Xunxiao; Lin, Zhicong; Lin, Hai; Yan, Hansong; Kuang, Zheng; Zhong, Weimin; Liang, Pingping; Wang, Guofeng; Yuan, Yuan; Shi, Jiaxian; Hou, Jinxiang; Lin, Jingxian; Jin, Jingjing; Cao, Peijian; Shen, Qiaochu; Jiang, Qing; Zhou, Ping; Ma, Yaying; Zhang, Xiaodan; Xu, Rongrong; Liu, Juan; Zhou, Yongmei; Jia, Haifeng; Ma, Qing; Qi, Rui; Zhang, Zhiliang; Fang, Jingping; Fang, Hongkun; Song, Jinjin; Wang, Mengjuan; Dong, Guangrui; Wang, Gang; Chen, Zheng; Ma, Teng; Liu, Hong; Dhungana, Singha R.; Huss, Sarah E.; Yang, Xiping; Sharma, Anupma; Trujillo, Jhon H.; Martinez, Maria C.; Hudson, Matthew; Riascos, John J.; Schuler, Mary; Chen, Li-Qing; Braun, David M.; Li, Lei; Yu, Qingyi; Wang, Jianping; Wang, Kai; Schatz, Michael C.; Heckerman, David; Van Sluys, Marie-Anne; Souza, Glaucia Mendes; Moore, Paul H.; Sankoff, David; VanBuren, Robert; Paterson, Andrew H.; Nagai, Chifumi; Ming, Ray 分享 收藏 Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.Zhang, Jisen; Zhang, Xingtan; Tang, Haibao; Zhang, Qing; Hua, Xiuting; Ma, Xiaokai; Zhu, Fan; Jones, Tyler; Zhu, Xinguang; Bowers, John; Wai, Ching Man; Zheng, Chunfang; Shil, Yan; Chen, Shuai; Xu, Xiuming; Yue, Jingjing; Nelsons, David R.; Huang, Lixian; Li, Zhen; Xu, Huimin; Zhou, Dong; Wang, Yongjun; Hu, Weichang; Lin, Jishan; Deng, Youjin; Pandey, Neha; Mancini, Melina; Zerpa, Dessiree; Nguyen, Julie K.; Wang, Liming; Yu, Liang; Xin, Yinghui; Ge, Liangfa; Arro, Jie; Han, Jennifer O.; Chakrabarty, Setu; Pushko, Marija; Zhang, Wenping; Ma, Yanhong; Ma, Panpan; Lv, Mingju; Chen, Faming; Zheng, Guangyong; Xu, Jingsheng; Yang, Zhenhui; Deng, Fang; Chen, Xuequn; Liao, Zhenyang; Zhang, Xunxiao; Lin, Zhicong; Lin, Hai; Yan, Hansong; Kuang, Zheng; Zhong, Weimin; Liang, Pingping; Wang, Guofeng; Yuan, Yuan; Shi, Jiaxian; Hou, Jinxiang; Lin, Jingxian; Jin, Jingjing; Cao, Peijian; Shen, Qiaochu; Jiang, Qing; Zhou, Ping; Ma, Yaying; Zhang, Xiaodan; Xu, Rongrong; Liu, Juan; Zhou, Yongmei; Jia, Haifeng; Ma, Qing; Qi, Rui; Zhang, Zhiliang; Fang, Jingping; Fang, Hongkun; Song, Jinjin; Wang, Mengjuan; Dong, Guangrui; Wang, Gang; Chen, Zheng; Ma, Teng; Liu, Hong; Dhungana, Singha R.; Huss, Sarah E.; Yang, Xiping; Sharma, Anupma; Trujillo, Jhon H.; Martinez, Maria C.; Hudson, Matthew; Riascos, John J.; Schuler, Mary; Chen, Li-Qing; Braun, David M.; Li, Lei; Yu, Qingyi; Wang, Jianping; Wang, Kai; Schatz, Michael C.; Heckerman, David; Van Sluys, Marie-Anne; Souza, Glaucia Mendes; Moore, Paul H.; Sankoff, David; VanBuren, Robert; Paterson, Andrew H.; Nagai, Chifumi; Ming, Ray 分享 收藏 分享 收藏 分享 收藏 分享 收藏 分享 收藏 Long-read sequencing uncovers the adaptive topography of a carnivorous plant genomeLan, Tianying; Renner, Tanya; Ibarra-Laclette, Enrique; Farr, Kimberly M.; Chang, Tien-Hao; Alan Cervantes-Perez, Sergio; Zheng, Chunfang; Sankoff, David; Tang, Haibao; Purbojati, Rikky W.; Putra, Alexander; Drautz-Moses, Daniela I.; Schuster, Stephan C.; Herrera-Estrella, Luis; Albert, Victor A. 分享 收藏 
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