Philipp C. Münch - Publications, H-index & Citations

Philipp C. Münch

department for computational biology of infection research

17H指数

57论文数

4.6K被引数

收录论文 15

发表时间

Comparative assessment of large language models for microbial phenotype assignment 比较大型语言模型在微生物表型赋值中的应用评估

Genome Biology

IF9.4

2026-07-23

OAAI

Philipp C. Münch; Nasim Safaei; René Mreches; Martin Binder; Yichen Han; Gary Robertson; Eric A. Franzosa; Curtis Huttenhower; Alice Carolyn McHardy

Comparison of different AI systems for diagnosing sepsis, septic shock, and cardiogenic shock: a retrospective study 比较不同AI系统用于诊断脓毒症、脓毒性休克和心源性休克的比较：一项回顾性研究

SCIENTIFIC REPORTS

IF3.9

2025-05-06

OAAI

Obmann, Dirk; Muench, Philipp; Graf, Bernhard; von Jouanne-Diedrich, Holger; Zausig, York A.

Optimized model architectures for deep learning on genomic data (vol 7, 516, 2024)用于基因组数据深度学习的优化模型架构 (第7卷，516，2024)

COMMUNICATIONS BIOLOGY

IF5.1

2024-05-23

OAAI

Guenduez, Hueseyin Anil; Mreches, Rene; Moosbauer, Julia; Robertson, Gary; To, Xiao-Yin; Franzosa, Eric A.; Huttenhower, Curtis; Rezaei, Mina; McHardy, Alice C.; Bischl, Bernd; Muench, Philipp C.; Binder, Martin

Assessing computational predictions of antimicrobial resistance phenotypes from microbial genomes

BRIEFINGS IN BIOINFORMATICS

IF7.7

2024-05-05

OAAI

Hu, Kaixin; Meyer, Fernando; Deng, Zhi-Luo; Asgari, Ehsaneddin; Kuo, Tzu-Hao; Muench, Philipp C.; Mchardy, Alice C.

Optimized model architectures for deep learning on genomic data 用于基因组数据深度学习的优化模型架构

COMMUNICATIONS BIOLOGY

IF5.1

2024-04-30

OAAI

Guenduez, Hueseyin Anil; Mreches, Rene; Moosbauer, Julia; Robertson, Gary; To, Xiao-Yin; Franzosa, Eric A.; Huttenhower, Curtis; Rezaei, Mina; Mchardy, Alice C.; Bischl, Bernd; Muench, Philipp C.; Binder, Martin

A self-supervised deep learning method for data-efficient training in genomics

COMMUNICATIONS BIOLOGY

IF5.1

2023-09-11

OAAI

Guenduez, Hueseyin Anil; Binder, Martin; To, Xiao-Yin; Mreches, Rene; Bischl, Bernd; McHardy, Alice C.; Muench, Philipp C.; Rezaei, Mina

Rapid and accurate identification of ribosomal RNA sequences via deep learning

NUCLEIC ACIDS RESEARCH

IF13.1

2022-02-21

OAAI

Deng, Zhi-Luo; Munch, Philipp C.; Mreches, Rene; McHardy, Alice C.

In vitro interaction network of a synthetic gut bacterial community 合成肠道细菌群落的体外相互作用网络

ISME JOURNAL

IF10

2021-12-02

OAAI

Weiss, Anna S.; Burrichter, Anna G.; Raj, Abilash Chakravarthy Durai; von Strempel, Alexandra; Meng, Chen; Kleigrewe, Karin; Muench, Philipp C.; Roessler, Luis; Huber, Claudia; Eisenreich, Wolfgang; Jochum, Lara M.; Goeing, Stephanie; Jung, Kirsten; Lincetto, Chiara; Huebner, Johannes; Marinos, Georgios; Zimmermann, Johannes; Kaleta, Christoph; Sanchez, Alvaro; Stecher, Baerbel

Evolutionary Stabilization of Cooperative Toxin Production through a Bacterium-Plasmid-Phage Interplay 通过细菌-质粒-噬菌体相互作用对协同毒素生产的进化稳定

MBIO

IF4.7

2020-08-25

OAAI

Spriewald, Stefanie; Stadler, Eva; Hense, Burkhard A.; Muench, Philipp C.; McHardy, Alice C.; Weiss, Anna S.; Obeng, Nancy; Mueller, Johannes; Stecher, Barbel

Evaluating assembly and variant calling software for strain-resolved analysis of large DNA viruses

BRIEFINGS IN BIOINFORMATICS

IF7.7

2020-07-07

OAAI

Deng, Zhi-Luo; Dhingra, Akshay; Fritz, Adrian; Goetting, Jasper; Muench, Philipp C.; Steinbrueck, Lars; Schulz, Thomas F.; Ganzenmueller, Tina; McHardy, Alice C.

Reproducible Colonization of Germ-Free Mice With the Oligo-Mouse-Microbiota in Different Animal Facilities

FRONTIERS IN MICROBIOLOGY

IF4.5

2020-01-10

OAAI

Eberl, Claudia; Ring, Diana; Mnch, Philipp C.; Beutler, Markus; Basic, Marijana; Slack, Emma Caroline; Schwarzer, Martin; Srutkova, Dagmar; Lange, Anna; Frick, Julia S.; Bleich, Andre; Stecher, Baerbel

Transcriptome-wide analysis uncovers the targets of the RNA-binding protein MSI2 and effects of MSI2's RNA-binding activity on IL-6 signaling

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2018-10-01

OAAI

Duggimpudi, Sujitha; Kloetgen, Andreas; Maney, Sathish Kumar; Munch, Philipp C.; Hezaveh, Kebria; Shaykhalishahi, Hamed; Hoyer, Wolfgang; McHardy, Alice C.; Lang, Philipp A.; Borkhardt, Arndt; Hoell, Jessica, I

Characterisation of a stable laboratory co-culture of acidophilic nanoorganisms

SCIENTIFIC REPORTS

IF3.9

2017-06-12

OAAI

Krause, Susanne; Bremges, Andreas; Muench, Philipp C.; McHardy, Alice C.; Gescher, Johannes

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi (vol 7, 11362, 2016)

NATURE COMMUNICATIONS

IF15.7

2016-09-29

OAAI

Hacquard, Stephane; Kracher, Barbara; Hiruma, Kei; Munch, Philipp C.; Garrido-Oter, Ruben; Thon, Michael R.; Weimann, Aaron; Damm, Ulrike; Dallery, Jean-Felix; Hainaut, Matthieu; Henrissat, Bernard; Lespinet, Olivier; Sacristan, Soledad; van Themaat, Emiel Ver Loren; Kemen, Eric; McHardy, Alice C.; Schulze-Lefert, Paul; O'Connell, Richard J.

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

NATURE COMMUNICATIONS

IF15.7

2016-05-06

184

OAAI

Hacquard, Stephane; Kracher, Barbara; Hiruma, Kei; Muech, Philipp C.; Garrido-Oter, Ruben; Thon, Michael R.; Weimann, Aaron; Damm, Ulrike; Dallery, Jean-Felix; Hainaut, Matthieu; Henrissat, Bernard; Lespinet, Olivier; Sacristan, Soledad; van Themaat, Emiel Ver Loren; Kemen, Eric; McHardy, Alice C.; Schulze-Lefert, Paul; O'Connell, Richard J.

研究方向