Hao Chi - Publications, H-index & Citations

Hao Chi

Institute of Computing Technology

28H指数

67论文数

4.0K被引数

收录论文 36

发表时间

A large-scale unified deep learning model for peptide mass spectrum interpretation trained on multimodal data 基于多模态数据训练的大规模统一深度学习模型用于肽质谱解析

Nature Machine Intelligence

IF23.9

2026-05-25

PREAI

Jiale Zhao; Pengzhi Mao; Kaifei Wang; Yiming Li; Yaping Peng; Ranfei Chen; Shuqi Lu; Xiaohong Ji; Jiaxiang Ding; Xin Zhang; Yucheng Liao; Weinan E; Han Wen; Weijie Zhang; Hao Chi

DiNovo enables high-coverage and high-confidence de novo peptide sequencing via mirror proteases and deep learning DiNovo通过镜像蛋白酶和深度学习实现高覆盖率和高度可信的从头肽段测序

Nature Communications

IF15.7

2026-03-05

OAAI

Zixuan Cao; Xueli Peng; Di Zhang; Piyu Zhou; Li Kang; Hao Chi; Ruitao Wu; Zhiyuan Cheng; Yao Zhang; Jiaxing Dai; Yanchang Li; Lijin Yao; Xinming Li; Yaoyu He; Jinghan Yang; Haipeng Wang; Ping Xu; Yan Fu

Correction: Global Analysis of Protein and Small-Molecule Substrates of Ubiquitin-Like Proteins 更正：泛素样蛋白的蛋白质和小分子底物的全球分析

Molecular & Cellular Proteomics

IF5.5

2026-03-04

OAAI

Guang-Can Shao; Zhen-Lin Chen; Shan Lu; Qing-Cui Wu; Yao Sheng; Jing Wang; Yan Ma; Jian-Hua Sui; Hao Chi; Xiang-Bing Qi; Si-Min He; Li-Lin Du; Meng-Qiu Dong

CRISPR-engineered T-cell therapies: some clarifications needed CRISPR工程化T细胞疗法：需要一些澄清

lancet oncology

IF0

2025-07-28

PREAI

Jinbang Huang; Haiqing Chen; Jiaan Lu; Ziye Zhuang; Hao Chi

Global analysis of protein and small-molecule substrates of ubiquitin-like proteins (UBLs)泛素样蛋白（UBLs）的蛋白质和小分子底物的全球分析

Molecular & Cellular Proteomics

IF5.5

2025-07-01

OAAI

Guang-Can Shao; Zhen-Lin Chen; Shan Lu; Qing-Cui Wu; Yao Sheng; Jing Wang; Yan Ma; Jian-Hua Sui; Hao Chi; Xiang-Bing Qi; Si-Min He; Li-Lin Du; Meng-Qiu Dong

A liver-specific mouse model for MYO5B-associated cholestasis reveals a toxic gain-of-function as underlying disease mechanism 一种针对MYO5B相关胆汁淤积的肝脏特异性小鼠模型揭示了毒性获得性功能是潜在的疾病机制

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

IF2.2

2025-04-01

PREAI

She, Hui-Yu; Qiu, Yi-Ling; Feng, Jia-Yan; Cheng, Ye; Chi, Hao; van IJzendoorn, Sven C. D.; Xing, Qing-He; Wang, Jian-She

TWEAK is an activator of Hippo-YAP signaling protecting against hepatic Ischemia/ reperfusion injury TWEAK是Hippo-YAP信号的激活剂，保护肝脏缺血/再灌注损伤

INTERNATIONAL IMMUNOPHARMACOLOGY

IF4.7

2024-12-01

PREAI

Tong, Wen; Zhu, Liuyang; Han, Pinsheng; Bai, Yi; Wang, Tianze; Chen, Dapeng; Li, Zhongmin; Chi, Hao; Deng, Xiyue; Zhang, Yamin; Shen, Zhongyang

A Mendelian randomization study of the association between serum uric acid and osteoporosis risk

FRONTIERS IN ENDOCRINOLOGY

IF4.6

2024-10-11

OAAI

Wu, Heng; Li, Hairui; Dai, Xiao; Dai, Yu; Liu, Hao; Xu, Shuang; Huang, Jinbang; Chi, Hao; Wang, Song

An overview of multi-omics technologies in rheumatoid arthritis: applications in biomarker and pathway discovery

FRONTIERS IN IMMUNOLOGY

IF5.9

2024-07-30

OAAI

Gong, Xiangjin; Su, Lanqian; Huang, Jinbang; Liu, Jie; Wang, Qinglai; Luo, Xiufang; Yang, Guanhu; Chi, Hao

A modification-centric assessment tool for the performance of chemoproteomic probes

NATURE CHEMICAL BIOLOGY

IF13.7

2022-07-21

OAAI

He, Ji-Xiang; Fei, Zheng-Cong; Fu, Ling; Tian, Cai-Ping; He, Fu-Chu; Chi, Hao; Yang, Jing

Exploring the Microbiome-Wide Lysine Acetylation, Succinylation, and Propionylation in Human Gut Microbiota

ANALYTICAL CHEMISTRY

IF6.7

2021-04-22

OAAI

Zhang, Xu; Cheng, Kai; Ning, Zhibin; Mayne, Janice; Walker, Krystal; Chi, Hao; Farnsworth, Charles L.; Lee, Kimberly; Figeys, Daniel

pDeepXL: MS/MS Spectrum Prediction for Cross-Linked Peptide Pairs by Deep Learning

JOURNAL OF PROTEOME RESEARCH

IF3.6

2021-04-06

PREAI

Chen, Zhen-Lin; Mao, Peng-Zhi; Zeng, Wen-Feng; Chi, Hao; He, Si-Min

Open-pFind Verified Four Missing Proteins from Multi-Tissues

JOURNAL OF PROTEOME RESEARCH

IF3.6

2020-11-10

PREAI

Wu, Shujia; Sun, Jinshuai; Wang, Xi; Xu, Feng; Chi, Hao; Li, Yanchang; Zhong, Bowen; Xie, Yuping; Yan, Zhonghua; Chang, Lei; Wang, Dongxue; He, Fuchu; Wu, Junzhu; Zhang, Yao; Xu, Ping

GameTag: A New Sequence Tag Generation Algorithm Based on Cooperative Game Theory

PROTEOMICS

IF3.9

2020-09-30

PREAI

Fei, Zhengcong; Wang, Kaifei; Chi, Hao

N-glycopeptide Signatures of IgA2 in Serum from Patients with Hepatitis B Virus-related Liver Diseases

MOLECULAR & CELLULAR PROTEOMICS

IF5.5

2019-11-01

OAAI

Zhang, Shu; Cao, Xinyi; Liu, Chao; Li, Wei; Zeng, Wenfeng; Li, Baiwen; Chi, Hao; Liu, Mingqi; Qin, Xue; Tang, Lingyi; Yan, Guoquan; Ge, Zefan; Liu, Yinkun; Gao, Qiang; Lu, Haojie

A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides 具有系统评估的高速搜索引擎pLink 2，用于蛋白质组规模的交联肽鉴定

NATURE COMMUNICATIONS

IF15.7

2019-07-30

311

OAAI

Chen, Zhen-Lin; Meng, Jia-Ming; Cao, Yong; Yin, Ji-Li; Fang, Run-Qian; Fan, Sheng-Bo; Liu, Chao; Zeng, Wen-Feng; Ding, Yue-He; Tan, Dan; Wu, Long; Zhou, Wen-Jing; Chi, Hao; Sun, Rui-Xiang; Dong, Meng-Qiu; He, Si-Min

MS/MS Spectrum Prediction for Modified Peptides Using pDeep2 Trained by Transfer Learning

ANALYTICAL CHEMISTRY

IF6.7

2019-06-25

PREAI

Zeng, Wen-Feng; Zhou, Xie-Xuan; Zhou, Wen-Jing; Chi, Hao; Zhan, Jianfeng; He, Si-Min

pValid: Validation Beyond the Target-Decoy Approach for Peptide Identification in Shotgun Proteomics

JOURNAL OF PROTEOME RESEARCH

IF3.6

2019-06-24

PREAI

Zhou, Wen-Jing; Yang, Hao; Zeng, Wen-Feng; Zhang, Kun; Chi, Hao; He, Si-Min

Assessing the Relationship Between Mass Window Width and Retention Time Scheduling on Protein Coverage for Data-Independent Acquisition 评估质量窗口宽度和保留时间调度对数据独立采集的蛋白质覆盖率之间的关系

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

IF2.7

2019-05-30

PREAI

Li, Wenxue; Chi, Hao; Salovska, Barbora; Wu, Chongde; Sun, Liangliang; Rosenberger, George; Liu, Yansheng

Precision De Novo Peptide Sequencing Using Mirror Proteases of Ac-LysargiNase and Trypsin for Large-scale Proteomics

MOLECULAR & CELLULAR PROTEOMICS

IF5.5

2019-04-01

OAAI

Yang, Hao; Li, Yan-Chang; Zhao, Ming-Zhi; Wu, Fei-Lin; Wang, Xi; Xiao, Wei-Di; Wang, Yi-Hao; Zhang, Jun-Ling; Wang, Fu-Qiang; Xu, Feng; Zengt, Wen-Feng; Overall, Christopher M.; He, Si-Min; Chi, Hao; Xu, Ping

研究方向