‪Siewert J. Marrink - Publications & Citations

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‪Siewert J. Marrink

Groningen Biomolecular Sciences and Biotechnology Institute

0H指数

3论文数

0被引数

收录论文 124

发表时间

Ligand binding free energy landscapes at the tubulin colchicine site from coarse-grained metadynamics 微正则元动力学下微管秋水仙碱位点的配体结合自由能景观

Communications Chemistry

IF6.2

2026-08-31

OAAI

Andrea Grazzi; Chelsea M. Brown; Maurizio Sironi; Siewert J. Marrink; Stefano Pieraccini

Folded domains impose structural heterogeneity and attenuated dynamics in biomolecular condensates 折叠结构域赋予生物分子凝聚体结构异质性并减弱其动态特性

Nature Communications

IF15.7

2026-04-16

OAAI

Liguo Wang; Siewert J. Marrink

Condition-dependent amorphous protein agglomerates control cytoplasmic rheology 条件依赖的无定形蛋白质聚集体调控细胞质流变学

Molecular Cell

IF16.6

2026-04-10

OAAI

José Losa; François Simon; Dmitrii Linnik; Saniye Gül Kaya; Marc C.A. Stuart; Artem Stetsenko; Rinse de Boer; Franz Y. Ho; Danny Incarnato; Jan Stevens; Jan van Eck; Marco W. Fraaije; Lucien E. Weiss; Sven van Teeffelen; Sanne Abeln; Albert Guskov; Siewert-Jan Marrink; Bert Poolman; Matthias Heinemann

Martinize2 and Vermouth provide a unified framework for molecular topology generation Martinize2和苦艾酒为分子拓扑生成提供了统一的框架

ELIFE

IF0

2025-11-20

OAAI

Kroon, Peter C.; Grunewald, Fabian; Barnoud, Jonathan; Van Tilburg, Marco; Brasnett, Chris; Souza, Paulo C. T.; Wassenaar, Tsjerk A.; Marrink, Siewert J.

Vesicle protrusion induced by antimicrobial peptides suggests common carpet mechanism for short antimicrobial peptides

SCIENTIFIC REPORTS

IF3.9

2024-04-27

OAAI

Park, Peter; Matsubara, Danilo K.; Barzotto, Domenico R.; Lima, Filipe S.; Chaimovich, Hernan; Marrink, Siewert J.; Cuccovia, Iolanda M.

Probing the stability and interdomain interactions in the ABC transporter OpuA using single-molecule optical tweezers

CELL REPORTS

IF6.9

2024-04-01

OAAI

van der Sleen, Lyan; Stevens, Jan A.; Marrink, Siewert J.; Poolman, Bert; Tych, Kasia

Multiscale simulations reveal TDP-43 molecular-level interactions driving condensation 多尺度模拟揭示了驱动凝聚的TDP-43分子水平相互作用

BIOPHYSICAL JOURNAL

IF3.1

2023-11-01

OAAI

Ingolfsson, Helgi I.; Rizuan, Azamat; Liu, Xikun; Mohanty, Priyesh; Souza, Paulo C. T.; Marrink, Siewert J.; Bowers, Michael T.; Mittal, Jeetain; Berry, Joel

Molecular insights into the effects of focused ultrasound mechanotherapy on lipid bilayers: Unlocking the keys to design effective treatments 聚焦超声机械疗法对脂质双层影响的分子洞察: 解锁设计有效治疗的钥匙

JOURNAL OF COLLOID AND INTERFACE SCIENCE

IF9.7

2023-11-01

OAAI

Blanco-Gonzalez, Alexandre; Marrink, Siewert J.; Pineiro, Angel; Garcia-Fandino, Rebeca

Molecular dynamics simulation of an entire cell 整个细胞的分子动力学模拟

FRONTIERS IN CHEMISTRY

IF4.2

2023-01-18

OAAI

Stevens, Jan A. A.; Grunewald, Fabian; van Tilburg, P. A. Marco; Koenig, Melanie; Gilbert, Benjamin R.; Brier, Troy A. A.; Thornburg, Zane R. R.; Luthey-Schulten, Zaida; Marrink, Siewert J. J.

Perspectives on High-Throughput Ligand/Protein Docking With Martini MD Simulations Martini MD模拟对高通量配体/蛋白质对接的展望

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2021-03-29

OAAI

Souza, Paulo C. T.; Limongelli, Vittorio; Wu, Sangwook; Marrink, Siewert J.; Monticelli, Luca

Binding of quinazolinones to c-KIT G-quadruplex; an interplay between hydrogen bonding and π-π stacking

BIOPHYSICAL CHEMISTRY

IF2.2

2019-10-01

OAAI

Moghaddam, Kiana Gholamjani; de Vries, Alek H.; Marrink, Siewert J.; Faraji, Shirin

Serine Phosphorylation of L-Selectin Regulates ERM Binding, Clustering, and Monocyte Protrusion in Transendothelial Migration

FRONTIERS IN IMMUNOLOGY

IF5.9

2019-09-25

OAAI

Newe, Abigail; Rzeniewicz, Karolina; Konig, Melanie; Schroer, Carsten F. E.; Joachim, Justin; Rey-Gallardo, Angela; Marrink, Siewert J.; Deka, Jurgen; Parsons, Maddy; Ivetic, Aleksandar

A Multi-Scale Approach to Membrane Remodeling Processes

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2019-07-23

OAAI

Pezeshkian, Weria; Konig, Melanie; Marrink, Siewert J.; Ipsen, John H.

Lipid Fingerprints and Cofactor Dynamics of Light-Harvesting Complex II in Different Membranes

BIOPHYSICAL JOURNAL

IF3.1

2019-04-01

OAAI

Thallmair, Sebastian; Vainikka, Petteri A.; Marrink, Siewert J.

Fluorinated Alcohols' Effects on Lipid Bilayer Properties

BIOPHYSICAL JOURNAL

IF3.1

2018-08-01

OAAI

Zhang, Mike; Peyear, Thasin; Patmanidis, Ilias; Greathouse, Denise, V; Marrink, Siewert J.; Andersen, Olaf S.; Ingolfsson, Helgi I.

Molecular Mechanism of Lipid Nanodisk Formation by Styrene-Maleic Acid Copolymers

BIOPHYSICAL JOURNAL

IF3.1

2018-08-01

OAAI

Xue, Minmin; Cheng, Lisheng; Faustino, Ignacio; Guo, Wanlin; Marrink, Siewert J.

Molecular Dynamics of the Association of L-Selectin and FERM Regulated by PIP2

BIOPHYSICAL JOURNAL

IF3.1

2018-04-01

OAAI

Sun, Fude; Schroer, Carsten F. E.; Xu, Lida; Yin, Huiwei; Marrink, Siewert J.; Luo, Shi-Zhong

Enhancing Molecular n-Type Doping of Donor-Acceptor Copolymers by Tailoring Side Chains 通过剪裁侧链增强供体-受体共聚物的分子n型掺杂

ADVANCED MATERIALS

IF26.8

2018-01-11

252

OAAI

Liu, Jian; Qiu, Li; Alessandri, Riccardo; Qiu, Xinkai; Portale, Giuseppe; Dong, JingJin; Talsma, Wytse; Ye, Gang; Sengrian, Aprizal Akbar; Souza, Paulo C. T.; Loi, Maria Antonietta; Chiechi, Ryan C.; Marrink, Siewert J.; Hummelen, Jan C.; Koster, L. Jan Anton

Prediction of Thylakoid Lipid Binding Sites on Photosystem II

BIOPHYSICAL JOURNAL

IF3.1

2017-12-01

OAAI

Van Eerden, Floris J.; Melo, Manuel N.; Frederix, Pim W. J. M.; Marrink, Siewert J.

Alcohol Interactions with Lipid Bilayers

MOLECULES

IF4.6

2017-11-28

OAAI

Kondela, Tomas; Gallova, Jana; Hauss, Thomas; Barnoud, Jonathan; Marrink, Siewert-J.; Kucerka, Norbert

研究方向