未登录 BV-BRC: a unified bacterial and viral bioinformatics resource with expanded functionality and AI integration BV-BRC：一个整合了细菌和病毒生物信息学资源的统一平台，具有扩展功能与人工智能集成 Shukla, Maulik; Wattam, Alice R.; Aleman, Antonio; Bhattacharya, Roshni; Bowers, Nicole; Brettin, Thomas; Capria, Anna; Chia, Nicholas; Cucinell, Clark; Davis, James j; Dempsey, Donald M.; Dickerman, Allan; Dietrich, Emily M.; Gokdemir, Ozan; Hendrickson, R. curtis; Kenyon, Ronald W.; Klahn, Brian; Kuscuoglu, Mehmet; Lefkowitz, Elliot J.; Ma, Heng; Machi, Dustin; Macken, Catherine; Mann, Carla m; Mao, Chunhong; Nguyen, Marcus; Olsen, Gary J.; Olson, Robert D.; Overbeek, Ross; Owens, Sarah M.; Parrello, Bruce; Poretsky, Rachel; Pusch, Gordon D.; Ramanathan, Arvind; Sheriff, Jamal tyrone; Singh, Indresh; Stewart, Lucy; Vanoeffelen, Margo; Vonstein, Veronika; Warren, Andrew S.; Wilke, Andreas; Zmasek, Christian m; Zuniga, Abril; Stevens, Rick L. 分享 收藏
PATRIC as a unique resource for studying antimicrobial resistance Antonopoulos, Dionysios A.; Assaf, Rida; Aziz, Ramy Karam; Brettin, Thomas; Bun, Christopher; Conrad, Neal; Davis, James J.; Dietrich, Emily M.; Disz, Terry; Gerdes, Svetlana; Kenyon, Ronald W.; Machi, Dustin; Mao, Chunhong; Murphy-Olson, Daniel E.; Nordberg, Eric K.; Olsen, Gary J.; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D.; Santerre, John; Shukla, Maulik; Stevens, Rick L.; VanOeffelen, Margo; Vonstein, Veronika; Warren, Andrew S.; Wattam, Alice R.; Xia, Fangfang; Yoo, Hyunseung 分享 收藏
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center Wattam, Alice R.; Davis, James J.; Assaf, Rida; Boisvert, Sebastien; Brettin, Thomas; Bun, Christopher; Conrad, Neal; Dietrich, Emily M.; Disz, Terry; Gabbard, Joseph L.; Gerdes, Svetlana; Henry, Christopher S.; Kenyon, Ronald W.; Machi, Dustin; Mao, Chunhong; Nordberg, Eric K.; Olsen, Gary J.; Murphy-Olson, Daniel E.; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D.; Shukla, Maulik; Vonstein, Veronika; Warren, Andrew; Xia, Fangfang; Yoo, Hyunseung; Stevens, Rick L. 分享 收藏
Computing and Applying Atomic Regulons to Understand Gene Expression and Regulation 计算和应用原子调节子来理解基因的表达和调控 Faria, Jose P.; Davis, James J.; Edirisinghe, Janaka N.; Taylor, Ronald C.; Weisenhorn, Pamela; Olson, Robert D.; Stevens, Rick L.; Rocha, Miguel; Rocha, Isabel; Best, Aaron A.; DeJongh, Matthew; Tintle, Nathan L.; Parrello, Bruce; Overbeek, Ross; Henry, Christopher S. 分享 收藏
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Antimicrobial Resistance Prediction in PATRIC and RAST PATRIC和RAST中的抗菌素耐药性预测 Davis, James J.; Boisvert, Sebastien; Brettin, Thomas; Kenyon, Ronald W.; Mao, Chunhong; Olson, Robert; Overbeek, Ross; Santerre, John; Shukla, Maulik; Wattam, Alice R.; Will, Rebecca; Xia, Fangfang; Stevens, Rick 分享 收藏
Reconstruction of the Regulatory Network for Bacillus subtilis and Reconciliation with Gene Expression Data Faria, Jose P.; Overbeek, Ross; Taylor, Ronald C.; Conrad, Neal; Vonstein, Veronika; Goelzer, Anne; Fromion, Vincent; Rocha, Miguel; Rocha, Isabel; Henry, Christopher S. 分享 收藏
RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes Brettin, Thomas; Davis, James J.; Disz, Terry; Edwards, Robert A.; Gerdes, Svetlana; Olsen, Gary J.; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D.; Shukla, Maulik; Thomason, James A., III; Stevens, Rick; Vonstein, Veronika; Wattam, Alice R.; Xia, Fangfang 分享 收藏
High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource 使用植物种子资源对植物基因组进行高通量比较，功能注释和代谢建模 Seaver, Samuel M. D.; Gerdes, Svetlana; Frelin, Oceane; Lerma-Ortiz, Claudia; Bradbury, Louis M. T.; Zallot, Remi; Hasnain, Ghulam; Niehaus, Thomas D.; El Yacoubi, Basma; Pasternak, Shiran; Olson, Robert; Pusch, Gordon; Overbeek, Ross; Stevens, Rick; de Crecy-Lagard, Valerie; Ware, Doreen; Hanson, Andrew D.; Henry, Christopher S. 分享 收藏
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST) 种子和使用子系统技术 (RAST) 的微生物基因组的快速注释 Overbeek, Ross; Olson, Robert; Pusch, Gordon D.; Olsen, Gary J.; Davis, James J.; Disz, Terry; Edwards, Robert A.; Gerdes, Svetlana; Parrello, Bruce; Shukla, Maulik; Vonstein, Veronika; Wattam, Alice R.; Xia, Fangfang; Stevens, Rick 分享 收藏
PATRIC, the bacterial bioinformatics database and analysis resource Wattam, Alice R.; Abraham, David; Dalay, Oral; Disz, Terry L.; Driscoll, Timothy; Gabbard, Joseph L.; Gillespie, Joseph J.; Gough, Roger; Hix, Deborah; Kenyon, Ronald; Machi, Dustin; Mao, Chunhong; Nordberg, Eric K.; Olson, Robert; Overbeek, Ross; Pusch, Gordon D.; Shukla, Maulik; Schulman, Julie; Stevens, Rick L.; Sullivan, Daniel E.; Vonstein, Veronika; Warren, Andrew; Will, Rebecca; Wilson, Meredith J. C.; Yoo, Hyun Seung; Zhang, Chengdong; Zhang, Yan; Sobral, Bruno W. 分享 收藏
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Synergistic use of plant-prokaryote comparative genomics for functional annotations Gerdes, Svetlana; El Yacoubi, Basma; Bailly, Marc; Blaby, Ian K.; Blaby-Haas, Crysten E.; Jeanguenin, Linda; Lara-Nunez, Aurora; Pribat, Anne; Waller, Jeffrey C.; Wilke, Andreas; Overbeek, Ross; Hanson, Andrew D.; de Crecy-Lagard, Valerie 分享 收藏
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus Rodionov, Dmitry A.; Novichkov, Pavel S.; Stavrovskaya, Elena D.; Rodionova, Irina A.; Li, Xiaoqing; Kazanov, Marat D.; Ravcheev, Dmitry A.; Gerasimova, Anna V.; Kazakov, Alexey E.; Kovaleva, Galina Yu; Permina, Elizabeth A.; Laikova, Olga N.; Overbeek, Ross; Romine, Margaret F.; Fredrickson, James K.; Arkin, Adam P.; Dubchak, Inna; Osterman, Andrei L.; Gelfand, Mikhail S. 分享 收藏
Genomic encyclopedia of sugar utilization pathways in the Shewanella genus Rodionov, Dmitry A.; Yang, Chen; Li, Xiaoqing; Rodionova, Irina A.; Wang, Yanbing; Obraztsova, Anna Y.; Zagnitko, Olga P.; Overbeek, Ross; Romine, Margaret F.; Reed, Samantha; Fredrickson, James K.; Nealson, Kenneth H.; Osterman, Andrei L. 分享 收藏
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The RAST server: Rapid annotations using subsystems technology RAST服务器: 使用子系统技术的快速注释 Aziz, Ramy K.; Bartels, Daniela; Best, Aaron A.; DeJongh, Matthew; Disz, Terrence; Edwards, Robert A.; Formsma, Kevin; Gerdes, Svetlana; Glass, Elizabeth M.; Kubal, Michael; Meyer, Folker; Olsen, Gary J.; Olson, Robert; Osterman, Andrei L.; Overbeek, Ross A.; McNeil, Leslie K.; Paarmann, Daniel; Paczian, Tobias; Parrello, Bruce; Pusch, Gordon D.; Reich, Claudia; Stevens, Rick; Vassieva, Olga; Vonstein, Veronika; Wilke, Andreas; Zagnitko, Olga 分享 收藏
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