Palitha Dharmawardhana - Publications, H-index & Citations

Palitha Dharmawardhana

Oregon State University

17H指数

46论文数

3.1K被引数

收录论文 16

发表时间

Abiotic Stresses Modulate Landscape of Poplar Transcriptome via Alternative Splicing, Differential Intron Retention, and Isoform Ratio Switching

FRONTIERS IN PLANT SCIENCE

IF4.8

2018-02-12

106

OAAI

Filichkin, Sergei A.; Hamilton, Michael; Dharmawardhana, Palitha D.; Singh, Sunil K.; Sullivan, Christopher; Ben-Hur, Asa; Reddy, Anireddy S. N.; Jaiswal, Pankaj

Plant Reactome: a resource for plant pathways and comparative analysis

NUCLEIC ACIDS RESEARCH

IF13.1

2016-10-30

OAAI

Naithani, Sushma; Preece, Justin; D'Eustachio, Peter; Gupta, Parul; Amarasinghe, Vindhya; Dharmawardhana, Palitha D.; Wu, Guanming; Fabregat, Antonio; Elser, Justin L.; Weiser, Joel; Keays, Maria; Fuentes, Alfonso Munoz-Pomer; Petryszak, Robert; Stein, Lincoln D.; Ware, Doreen; Jaiswal, Pankaj

Extensive Transcriptome Changes During Natural Onset and Release of Vegetative Bud Dormancy in Populus

FRONTIERS IN PLANT SCIENCE

IF4.8

2015-12-17

OAAI

Howe, Glenn T.; Horvath, David P.; Dharmawardhana, Palitha; Priest, Henry D.; Mockler, Todd C.; Strauss, Steven H.

Gramene 2016: comparative plant genomics and pathway resources

NUCLEIC ACIDS RESEARCH

IF13.1

2015-11-08

103

OAAI

Tello-Ruiz, Marcela K.; Stein, Joshua; Wei, Sharon; Preece, Justin; Olson, Andrew; Naithani, Sushma; Amarasinghe, Vindhya; Dharmawardhana, Palitha; Jiao, Yinping; Mulvaney, Joseph; Kumari, Sunita; Chougule, Kapeel; Elser, Justin; Wang, Bo; Thomason, James; Bolser, Daniel M.; Kerhornou, Arnaud; Walts, Brandon; Fonseca, Nuno A.; Huerta, Laura; Keays, Maria; Tanga, Y. Amy; Parkinson, Helen; Fabregat, Antonio; McKay, Sheldon; Weiser, Joel; D'Eustachio, Peter; Stein, Lincoln; Petryszak, Robert; Kersey, Paul J.; Jaiswal, Pankaj; Ware, Doreen

Environmental Stresses Modulate Abundance and Timing of Alternatively Spliced Circadian Transcripts in Arabidopsis

MOLECULAR PLANT

IF24.1

2015-02-01

117

OAAI

Filichkin, Sergei A.; Cumbie, Jason S.; Dharmawardhana, Palitha; Jaiswal, Pankaj; Chang, Jeff H.; Palusa, Saiprasad G.; Reddy, A. S. N.; Megraw, Molly; Mockler, Todd C.

Gramene 2013: comparative plant genomics resources

NUCLEIC ACIDS RESEARCH

IF13.1

2013-11-11

154

OAAI

Monaco, Marcela K.; Stein, Joshua; Naithani, Sushma; Wei, Sharon; Dharmawardhana, Palitha; Kumari, Sunita; Amarasinghe, Vindhya; Youens-Clark, Ken; Thomason, James; Preece, Justin; Pasternak, Shiran; Olson, Andrew; Jiao, Yinping; Lu, Zhenyuan; Bolser, Dan; Kerhornou, Arnaud; Staines, Dan; Walts, Brandon; Wu, Guanming; D'Eustachio, Peter; Haw, Robin; Croft, David; Kersey, Paul J.; Stein, Lincoln; Jaiswal, Pankaj; Ware, Doreen

Maize Metabolic Network Construction and Transcriptome Analysis

PLANT GENOME

IF3.8

2013-03-01

OAAI

Monaco, Marcela K.; Sen, Taner Z.; Dharmawardhana, Palitha D.; Ren, Liya; Schaeffer, Mary; Naithani, Sushma; Amarasinghe, Vindhya; Thomason, Jim; Harper, Lisa; Gardiner, Jack; Cannon, Ethalinda K. S.; Lawrence, Carolyn J.; Ware, Doreen; Jaiswal, Pankaj

Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus

GENOME RESEARCH

IF5.5

2011-10-05

117

OAAI

Rodgers-Melnick, Eli; Mane, Shrinivasrao P.; Dharmawardhana, Palitha; Slavov, Gancho T.; Crasta, Oswald R.; Strauss, Steven H.; Brunner, Amy M.; DiFazio, Stephen P.

Gibberellin-associated cisgenes modify growth, stature and wood properties in Populus

PLANT BIOTECHNOLOGY JOURNAL

IF10.5

2011-01-06

OAAI

Han, Katherine M.; Dharmawardhana, Palitha; Arias, Renee S.; Ma, Cathleen; Busov, Victor; Strauss, Steven H.

The genome of woodland strawberry (Fragaria vesca)

NATURE GENETICS

IF31.8

2010-12-26

1.0K

OAAI

Shulaev, Vladimir; Sargent, Daniel J.; Crowhurst, Ross N.; Mockler, Todd C.; Folkerts, Otto; Delcher, Arthur L.; Jaiswal, Pankaj; Mockaitis, Keithanne; Liston, Aaron; Mane, Shrinivasrao P.; Burns, Paul; Davis, Thomas M.; Slovin, Janet P.; Bassil, Nahla; Hellens, Roger P.; Evans, Clive; Harkins, Tim; Kodira, Chinnappa; Desany, Brian; Crasta, Oswald R.; Jensen, Roderick V.; Allan, Andrew C.; Michael, Todd P.; Setubal, Joao Carlos; Celton, Jean-Marc; Rees, D. Jasper G.; Williams, Kelly P.; Holt, Sarah H.; Rojas, Juan Jairo Ruiz; Chatterjee, Mithu; Liu, Bo; Silva, Herman; Meisel, Lee; Adato, Avital; Filichkin, Sergei A.; Troggio, Michela; Viola, Roberto; Ashman, Tia-Lynn; Wang, Hao; Dharmawardhana, Palitha; Elser, Justin; Raja, Rajani; Priest, Henry D.; Bryant, Douglas W., Jr.; Fox, Samuel E.; Givan, Scott A.; Wilhelm, Larry J.; Naithani, Sushma; Christoffels, Alan; Salama, David Y.; Carter, Jade; Girona, Elena Lopez; Zdepski, Anna; Wang, Wenqin; Kerstetter, Randall A.; Schwab, Wilfried; Korban, Schuyler S.; Davik, Jahn; Monfort, Amparo; Denoyes-Rothan, Beatrice; Arus, Pere; Mittler, Ron; Flinn, Barry; Aharoni, Asaph; Bennetzen, Jeffrey L.; Salzberg, Steven L.; Dickerman, Allan W.; Velasco, Riccardo; Borodovsky, Mark; Veilleux, Richard E.; Folta, Kevin M.

Gramene database in 2010: updates and extensions

NUCLEIC ACIDS RESEARCH

IF13.1

2010-11-13

116

OAAI

Youens-Clark, Ken; Buckler, Ed; Casstevens, Terry; Chen, Charles; DeClerck, Genevieve; Derwent, Paul; Dharmawardhana, Palitha; Jaiswal, Pankaj; Kersey, Paul; Karthikeyan, A. S.; Lu, Jerry; McCouch, Susan R.; Ren, Liya; Spooner, William; Stein, Joshua C.; Thomason, Jim; Wei, Sharon; Ware, Doreen

Exploring the developmental epigenome of Populus trichocarpa

JOURNAL OF BIOTECHNOLOGY

IF3.9

2010-11-01

PREAI

Strauss, S. H.; Vining, K.; Pomraning, K. R.; Wilhelm, L.; Dharmawardhana, P. D.; Priest, H. D.

Genome-wide transcriptome analysis of the transition from primary to secondary stem development in Populus trichocarpa

BMC GENOMICS

IF3.7

2010-03-04

119

OAAI

Dharmawardhana, Palitha; Brunner, Amy M.; Strauss, Steven H.

Genome scale transcriptome analysis of shoot organogenesis in Populus

BMC PLANT BIOLOGY

IF4.8

2009-11-17

OAAI

Bao, Yanghuan; Dharmawardhana, Palitha; Mockler, Todd C.; Strauss, Steven H.

WUS and STM-based reporter genes for studying meristem development in poplar 基于WUS和STM的报告基因，用于研究杨树分生组织的发育

PLANT CELL REPORTS

IF4.5

2009-03-12

PREAI

Bao, Y.; Dharmawardhana, P.; Arias, R.; Allen, M. B.; Ma, C.; Strauss, Steven H.

Enhancer trapping in woody plants:: Isolation of the ET304 gene encoding a putative AT-hook motif transcription factor and characterization of the expression patterns conferred by its promoter in transgenic Populus and Arabidopsis

PLANT SCIENCE

IF4.1

2006-08-01

PREAI

Filichkin, Sergei A.; Wu, Qian; Busov, Victor; Meilan, Richard; Lanz-Garcia, Carmen; Groover, Andrew; Goldfarb, Barry; Ma, Caiping; Dharmawardhana, Palitha; Brunner, Amy; Strauss, Steven H.

研究方向