John Gounley

united states department of energy (doe)

19H指数

110论文数

2.4K被引数

收录论文 15

发表时间

Deformable phrase level attention: A flexible approach for improving AI based medical coding 变形短语级注意力：一种提高基于AI的医疗编码的灵活方法

Artificial Intelligence in Medicine

IF6.2

2025-11-15

OAAI

Christoph S. Metzner; Shang Gao; Drahomira Herrmannova; John Gounley; Heidi A. Hanson

Large-scale deep learning for metastasis detection in pathology reports 大规模深度学习在病理报告转移检测中的应用

JAMIA OPEN

IF3.4

2025-08-01

OAAI

Krawczuk, Patrycja; Fox, Zachary R.; Petkov, Valentina; Negoita, Serban; Doherty, Jennifer; Stroup, Antoinette; Schwartz, Stephen; Penberthy, Lynne; Hsu, Elizabeth; Gounley, John; Hanson, Heidi A.

Evaluating algorithmic bias on biomarker classification of breast cancer pathology reports 评估乳腺癌病理报告中生物标志物分类的算法偏见

JAMIA OPEN

IF3.4

2025-05-09

OAAI

Tschida, Jordan; Chandrashekar, Mayanka; Peluso, Alina; Fox, Zachary; Krawczuk, Patrycja; Murdock, Dakota; Wu, Xiao-Cheng; Gounley, John; Hanson, Heidi A.

Enhancing molecular design efficiency: Uniting language models and generative networks with genetic algorithms

PATTERNS

IF7.4

2024-04-01

OAAI

Bhowmik, Debsindhu; Zhang, Pei; Fox, Zachary; Irle, Stephan; Gounley, John

Path-BigBird: An AI-Driven Transformer Approach to Classification of Cancer Pathology Reports Path-BigBird: 一种人工智能驱动的癌症病理报告分类方法

JCO CLINICAL CANCER INFORMATICS

IF2.8

2024-03-01

OAAI

Chandrashekar, Mayanka; Lyngaas, Isaac; Hanson, Heidi A.; Gao, Shang; Wu, Xiao-Cheng; Gounley, John

Transferring a Molecular Foundation Model for Polymer Property Predictions 转移用于聚合物性能预测的分子基础模型

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2023-12-06

OAAI

Zhang, Pei; Kearney, Logan; Bhowmik, Debsindhu; Fox, Zachary; Naskar, Amit K.; Gounley, John

TwoFold: Highly accurate structure and affinity prediction for protein-ligand complexes from sequences

INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS

IF2.5

2023-10-30

PREAI

Hsu, Darren J.; Lu, Hao; Kashi, Aditya; Matheson, Michael; Gounley, John; Wang, Feiyi; Joubert, Wayne; Glaser, Jens

Language models for the prediction of SARS-CoV-2 inhibitors

INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS

IF2.5

2022-10-07

OAAI

Blanchard, Andrew E.; Gounley, John; Bhowmik, Debsindhu; Shekar, Mayanka Chandra; Lyngaas, Isaac; Gao, Shang; Yin, Junqi; Tsaris, Aristeidis; Wang, Feiyi; Glaser, Jens

Automating Genetic Algorithm Mutations for Molecules Using a Masked Language Model

IEEE TRANSACTIONS ON EVOLUTIONARY COMPUTATION

IF12

2022-08-01

OAAI

Blanchard, Andrew E.; Shekar, Mayanka Chandra; Gao, Shang; Gounley, John; Lyngaas, Isaac; Glaser, Jens; Bhowmik, Debsindhu

Propagation Pattern for Moment Representation of the Lattice Boltzmann Method

IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS

IF6

2022-03-01

OAAI

Gounley, John; Vardhan, Madhurima; Draeger, Erik W.; Valero-Lara, Pedro; Moore, Shirley, V; Randles, Amanda

Limitations of Transformers on Clinical Text Classification 《变形金刚》对临床文本分类的局限性

IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS

IF6.8

2021-09-01

OAAI

Gao, Shang; Alawad, Mohammed; Young, M. Todd; Gounley, John; Schaefferkoetter, Noah; Yoon, Hong Jun; Wu, Xiao-Cheng; Durbin, Eric B.; Doherty, Jennifer; Stroup, Antoinette; Coyle, Linda; Tourassi, Georgia

Accelerated training of bootstrap aggregation-based deep information extraction systems from cancer pathology reports

JOURNAL OF BIOMEDICAL INFORMATICS

IF4.5

2020-10-01

OAAI

Yoon, Hong-Jun; Klasky, Hilda B.; Gounley, John P.; Alawad, Mohammed; Gao, Shang; Durbin, Eric B.; Wu, Xiao-Cheng; Stroup, Antoinette; Doherty, Jennifer; Coyle, Linda; Penberthy, Lynne; Christian, J. Blair; Tourassi, Georgia D.

Multi-GPU immersed boundary method hemodynamics simulations 多GPU浸入边界法血流动力学模拟

nature computational science

IF3.7

2020-07-01

OAAI

Ames, Jeff; Puleri, Daniel F.; Balogh, Peter; Gounley, John; Draeger, Erik W.; Randles, Amanda

Performance portability study for massively parallel computational fluid dynamics application on scalable heterogeneous architectures 可扩展异构体系结构上大规模并行计算流体动力学应用的性能可移植性研究

JOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING

IF4

2019-07-01

OAAI

Lee, Seyong; Gounley, John; Randles, Amanda; Vetter, Jeffrey S.