Kalai Mathee - Publications, H-index & Citations

Kalai Mathee

Florida International University

43H指数

173论文数

8.0K被引数

收录论文 42

发表时间

EMoMiS: A pipeline for epitope-based molecular mimicry search in protein structures with potential applications to SARS-CoV-2

Computational and Structural Biotechnology Journal

IF4.1

2026-02-02

OAAI

Vitalii Stebliankin; Rajeshwari Chellappan; Prabin Baral; Christian Balbin; Janelle Nunez-Castilla; Masrur Sobhan; Trevor Cickovski; Ashleigh N. Riegler; Ananda Mohan Mondal; Jessica Siltberg-Liberles; Prem Chapagain; Sathibalan Ponniah; Sixto M. Leal; Kalai Mathee; Giri Narasimhan

MetaEdit: Computational Identification of RNA Editing in Microbiomes MetaEdit：微生物组中RNA编辑的计算机识别

COMPUTATIONAL ADVANCES IN BIO AND MEDICAL SCIENCES, ICCABS 2025

IF0

2026-01-01

PREAI

Mehta, Arpit; Stebliankini, Vitalii; Mathee, Kalai; Narasimhani, Giri

Unfolding and de-confounding: biologically meaningful causal inference from longitudinal multi-omic networks using METALICA

MSYSTEMS

IF4.6

2024-10-22

OAAI

Ruiz-Perez, Daniel; Gimon, Isabella; Sazal, Musfiqur; Mathee, Kalai; Narasimhan, Giri

Differences in gut microbiota between Dutch and South-Asian Surinamese: potential implications for type 2 diabetes mellitus

SCIENTIFIC REPORTS

IF3.9

2024-02-26

OAAI

Nayman, Eric I.; Schwartz, Brooke A.; Polmann, Michaela; Gumabong, Alayna C.; Nieuwdorp, Max; Cickovski, Trevor; Mathee, Kalai

Evaluating protein binding interfaces with transformer networks

NATURE MACHINE INTELLIGENCE

IF23.9

2023-09-07

PREAI

Stebliankin, Vitalii; Shirali, Azam; Baral, Prabin; Shi, Jimeng; Chapagain, Prem; Mathee, Kalai; Narasimhan, Giri

Raising awareness of antimicrobial resistance: development of an 'antibiotic footprint calculator'

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

IF3.6

2023-04-18

OAAI

Prapharsavat, Ravikanya; Kittikongnapang, Rattanasiri; Smithkittipol, Chokdee; Udomrat, Warute; Numsawat, Sukanya; Hernandez-Koutoucheva, Anastasia; Naemiratch, Bhensri; Chomkatekaew, Chalita; Amaratunga, Chanaki; Bleho, John; Mathee, Kalai; Schneiders, Mira Leonie; Khirikoekkong, Napat; Kanthawang, Nipaphan; Sumpradit, Nithima; Suveeranont, Rapee; Asarath, Supa-at; Poomchaichote, Tassawan; Schilling, William; Chan, Xin Hui S.; Osterrieder, Anne; Cheah, Phaik Yeong; Limmathurotsakul, Direk

A novel approach for combining the metagenome, metaresistome, metareplicome and causal inference to determine the microbes and their antibiotic resistance gene repertoire that contribute to dysbiosis

MICROBIAL GENOMICS

IF4

2022-12-20

OAAI

Stebliankin, Vitalii; Sazal, Musfiqur; Valdes, Camilo; Mathee, Kalai; Narasimhan, Giri

Prior exposure to microcystin alters host gut resistome and is associated with dysregulated immune homeostasis in translatable mouse models

SCIENTIFIC REPORTS

IF3.9

2022-07-07

OAAI

Saha, Punnag; Bose, Dipro; Stebliankin, Vitalii; Cickovski, Trevor; Seth, Ratanesh K.; Porter, Dwayne E.; Brooks, Bryan W.; Mathee, Kalai; Narasimhan, Giri; Colwell, Rita; Scott, Geoff, I; Chatterjee, Saurabh

Potential Autoimmunity Resulting from Molecular Mimicry between SARS-CoV-2 Spike and Human Proteins SARS-CoV-2刺突与人类蛋白质之间的分子模拟导致的潜在自身免疫

VIRUSES-BASEL

IF3.5

2022-06-28

OAAI

Nunez-Castilla, Janelle; Stebliankin, Vitalii; Baral, Prabin; Balbin, Christian A.; Sobhan, Masrur; Cickovski, Trevor; Mondal, Ananda Mohan; Narasimhan, Giri; Chapagain, Prem; Mathee, Kalai; Siltberg-Liberles, Jessica

Rhizospheric and endophytic Pseudomonas aeruginosa in edible vegetable plants share molecular and metabolic traits with clinical isolates

JOURNAL OF APPLIED MICROBIOLOGY

IF3.2

2022-04-01

OAAI

Ambreetha, Sakthivel; Marimuthu, Ponnusamy; Mathee, Kalai; Balachandar, Dananjeyan

New dynamic microreactor system to mimic biofilm formation and test anti-biofilm activity of nanoparticles

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

IF4.3

2022-03-24

PREAI

Bourguignon, Natalia; Kamat, Vivek; Perez, Maximiliano; Mathee, Kalai; Lerner, Betiana; Bhansali, Shekhar

Dynamic Bayesian Networks for Integrating Multi-omics Time Series Microbiome Data 用于集成多组学时间序列微生物组数据的动态贝叶斯网络

MSYSTEMS

IF4.6

2021-04-27

OAAI

Ruiz-Perez, Daniel; Lugo-Martinez, Jose; Bourguignon, Natalia; Mathee, Kalai; Lerner, Betiana; Bar-Joseph, Ziv; Narasimhan, Giri

Causal effects in microbiomes using interventional calculus

SCIENTIFIC REPORTS

IF3.9

2021-03-11

OAAI

Sazal, Musfiqur; Stebliankin, Vitalii; Mathee, Kalai; Yoo, Changwon; Narasimhan, Giri

Inferring directional relationships in microbial communities using signed Bayesian networks 使用有符号贝叶斯网络推断微生物群落中的方向关系

BMC GENOMICS

IF3.7

2020-12-21

OAAI

Sazal, Musfiqur; Mathee, Kalai; Ruiz-Perez, Daniel; Cickovski, Trevor; Narasimhan, Giri

Composition of the Vaginal Microbiome Associated with High Risk HPV Infection and Increased Risk for Cervical Cancer

CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

IF3.4

2020-03-04

PREAI

Madhivanan, P.; Bokulich, N. A.; Coudray, M.; Colbert, B.; Ruiz-Perez, D.; Krupp, K.; Mathee, K.; Narasimhan, G.; Caporaso, J. G.

CO-OCCURRENCE OF BACTERIAL VAGINOSIS AND TRICHOMONAS VAGINALIS AMONG YOUNG AFRICAN AMERICAN WOMEN

SEXUALLY TRANSMITTED INFECTIONS

IF2.9

2019-07-14

OAAI

Madhivanan, Purnima; Coudray, Makella; Ruiz-Perez, Daniel; Colbert, Brett; Krupp, Karl; Kumar, Hansi; Narasimhan, Giri; Mathee, Kalai

BACTERIAL VAGINOSIS AND HIGH-RISK HUMAN PAPILLOMAVIRUS COINFECTION AMONG AFRICAN AMERICAN WOMEN IN THE UNITED STATES

SEXUALLY TRANSMITTED INFECTIONS

IF2.9

2019-07-14

OAAI

Madhivanan, Purnima; Coudray, Makella; Ruiz-Perez, Daniel; Colbert, Brett; Krupp, Karl; Kumari, Hansi; Mathee, Kalai; Narasimhan, Giri

EFFECT OF METRONIDAZOLE TREATMENT ON RECURRENT AND PERSISTENT BACTERIAL VAGINOSIS: A PILOT STUDY

SEXUALLY TRANSMITTED INFECTIONS

IF2.9

2019-07-14

OAAI

Coudray, Makella; Ruiz-Perez, Daniel; Colbert, Brett; Krupp, Karl; Kumari, Hansi; Narasimhan, Giri; Mathee, Kalai; Madhivanan, Purnima

DORA Editorial 多拉社论

JOURNAL OF GENERAL VIROLOGY

IF4.3

2019-01-01

OAAI

Parish, Tanya; Harris, Mark; Fry, Norman; Mathee, Kalai; Trujillo, Martha E.; Bentley, Stephen; Thomson, Nicholas

DORA Editorial

MICROBIAL GENOMICS

IF4

2018-12-01

OAAI

Parish, Tanya; Harris, Mark; Fry, Norman; Mathee, Kalai; Trujillo, Martha E.; Bentley, Stephen; Thomson, Nicholas

研究方向