Daniela Kalafatović - Publications, H-index & Citations

Daniela Kalafatović

Faculty of Engineering

15H指数

51论文数

1.8K被引数

收录论文 25

发表时间

Data-driven surrogates of rational design enable antimicrobial peptide optimization 数据驱动的理性设计替代模型能够实现抗菌肽优化

Nature Machine Intelligence

IF23.9

2026-06-25

PREAI

Goran Mauša; Daniela Kalafatovic

In Vitro and In Vivo Characterization of Novel Cathelicidin-Based Peptides with Antimicrobial Activity Against Pseudomonas aeruginosa 体内外表征针对铜绿假单胞菌具有抗菌活性的新型 Cathelicidin 基肽

Antibiotics

IF0

2026-06-23

PREAI

Javier Moreno-Morales; Núria Martín-Vilardell; Salvador Guardiola; Xavier Vila-Farrés; Tania Cebrero; Marko Babić; Clara Ballesté-Delpierre; Daniela Kalafatović; Ernest Giralt; María Eugenia Pachón-Ibañez; Jordi Vila

Secondary Structure Bead-Encoded Amphiphilicity Biases Peptide Self-Assembly Prediction in MARTINI Coarse-Grained Simulations

ACS Applied Materials & Interfaces

IF0

2026-02-19

OAAI

Marko Babić; Goran Mauša; Ivan R. Sasselli; Daniela Kalafatovic

A multi-library approach to parallelised sequence space exploration: Streamlining library design and search space coverage 一种多库方法用于并行化序列空间探索：简化库设计及搜索空间覆盖

Computers in Biology and Medicine

IF6.3

2025-10-16

PREAI

Marko Njirjak; Erik Otović; Daniela Kalafatovic; Goran Mauša

Understanding Biases in Liquid–Liquid Phase Separation: Investigating Amino Acid Enrichments in Phase-Separating Proteins toward Peptide Design 理解液-液相分离中的偏差：研究相分离蛋白中氨基酸富集对肽段设计的影响

Biomacromolecules

IF5.4

2025-09-22

PREAI

Joana Calvário; Diogo Antunes; Rita Cipriano; Daniela Kalafatovic; Goran Mauša; Ana S. Pina

In Vitro and In Vivo Characterization of Novel Cathelicidin-Based Peptides with Antimicrobial Activity Against Pseudomonas aeruginosa 体外和体内表征针对铜绿假单胞菌具有抗菌活性的新型 Cathelicidin 基肽

Antibiotics 2025, Vol. 14, Page 838

IF0

2025-09-22

OAAI

Reshaping the discovery of self-assembling peptides with generative AI guided by hybrid deep learning 混合深度学习指导下的生成性AI重塑自组装肽的发现

NATURE MACHINE INTELLIGENCE

IF23.9

2024-11-19

PREAI

Njirjak, Marko; Zuzic, Lucija; Babic, Marko; Jankovic, Patrizia; Otovic, Erik; Kalafatovic, Daniela; Mausa, Goran

Amyloids, amorphous aggregates and assemblies of peptides - Assessing aggregation

BIOPHYSICAL CHEMISTRY

IF2.2

2024-05-01

PREAI

Jukovic, Maja; Ratkaj, Ivana; Kalafatovic, Daniela; Bradshaw, Nicholas J.

Efficiently solving the curse of feature-space dimensionality for improved peptide classification

DIGITAL DISCOVERY

IF5.6

2024-01-01

OAAI

Negovetic, Mario; Otovic, Erik; Kalafatovic, Daniela; Mausa, Goran

Antiviral Peptide-Based Conjugates: State of the Art and Future Perspectives

PHARMACEUTICS

IF5.5

2023-01-20

OAAI

Todorovski, Toni; Kalafatovic, Daniela; Andreu, David

Factors influencing the catalytic activity of metal-dependent histidine-rich peptides: sequence, conformation, stereochemistry, self-assembly or their interplay?

MOLECULAR SYSTEMS DESIGN & ENGINEERING

IF3.2

2023-01-01

OAAI

Jankovic, Patrizia; Babic, Marko; Percic, Marko; Pina, Ana S.; Kalafatovic, Daniela

Esterase Sequence Composition Patterns for the Identification of Catalytic Triad Microenvironment Motifs

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2022-10-12

OAAI

Babic, Marko; Jankovic, Patrizia; Marchesan, Silvia; Mausa, Goran; Kalafatovic, Daniela

Sequential Properties Representation Scheme for Recurrent Neural Network-Based Prediction of Therapeutic Peptides

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2022-06-15

PREAI

Otovic, Erik; Njirjak, Marko; Kalafatovic, Daniela; Mausa, Goran

Discovery of phosphotyrosine-binding oligopeptides with supramolecular target selectivity

CHEMICAL SCIENCE

IF7.4

2022-01-01

OAAI

Pina, Ana S.; Morgado, Leonor; Duncan, Krystyna L.; Carvalho, Sara; Carvalho, Henrique F.; Barbosa, Armenio J. M.; Mariz, Beatriz de P.; Moreira, Ines P.; Kalafatovic, Daniela; Morais Faustino, Bruno M.; Narang, Vishal; Wang, Tong; Pappas, Charalampos G.; Ferreira, Isabel; Roque, A. Cecilia A.; Ulijn, Rein, V

Exploiting Peptide Self-Assembly for the Development of Minimalistic Viral Mimetics 利用肽自组装开发简约的病毒模拟物

FRONTIERS IN CHEMISTRY

IF4.2

2021-07-28

OAAI

Jankovic, Patrizia; Santek, Iva; Pina, Ana Sofia; Kalafatovic, Daniela

Bottom-Up Design Approach for OBOC Peptide Libraries

MOLECULES

IF4.6

2020-07-22

OAAI

Kalafatovic, Daniela; Mausa, Goran; Resetar Maslov, Dina; Giralt, Ernest

Algorithm-supported, mass and sequence diversity-oriented random peptide library design

JOURNAL OF CHEMINFORMATICS

IF5.7

2019-03-28

OAAI

Kalafatovic, Daniela; Mausa, Goran; Todorovski, Toni; Giralt, Ernest

Customizing Morphology, Size, and Response Kinetics of Matrix Metalloproteinase-Responsive Nanostructures by Systematic Peptide Design

ACS NANO

IF16

2019-01-30

OAAI

Son, Jiye; Kalafatovic, Daniela; Kumar, Mohit; Yoo, Barney; Cornejo, Mike A.; Contel, Maria; Ulijn, Rein V.

MSK1 regulates luminal cell differentiation and metastatic dormancy in ER+ breast cancer (vol 20, pg 211, 2018)

NATURE CELL BIOLOGY

IF19.1

2018-04-19

OAAI

Gawrzak, Sylwia; Rinaldi, Lorenzo; Gregorio, Sara; Arenas, Enrique J.; Salvador, Fernando; Urosevic, Jelena; Figueras-Puig, Cristina; Rojo, Federico; Barrantes, Ivan del Barco; Cejalvo, Juan Miguel; Palafox, Marta; Guiu, Marc; Berenguer-Llergo, Antonio; Symeonidi, Aikaterini; Bellmunt, Anna; Kalafatovic, Daniela; Arnal-Estape, Anna; Fernandez, Esther; Mullauer, Barbara; Groeneveld, Rianne; Slobodnyuk, Konstantin; Attolini, Camille Stephan-Otto; Saura, Cristina; Arribas, Joaquin; Cortes, Javier; Rovira, Ana; Munoz, Montse; Lluch, Ana; Serra, Violeta; Albanell, Joan; Prat, Aleix; Nebreda, Angel R.; Benitah, Salvador Aznar; Gomis, Roger R.

MSK1 regulates luminal cell differentiation and metastatic dormancy in ER+ breast cancer

NATURE CELL BIOLOGY

IF19.1

2018-01-22

109

PREAI

Gawrzak, Sylwia; Rinaldi, Lorenzo; Gregorio, Sara; Arenas, Enrique J.; Salvador, Fernando; Urosevic, Jelena; Figueras-Puig, Cristina; Rojo, Federico; del Barco Barrantes, Ivan; Miguel Cejalvo, Juan; Palafox, Marta; Guiu, Marc; Berenguer-Llergo, Antonio; Symeonidi, Aikaterini; Bellmunt, Anna; Kalafatovic, Daniela; Arnal-Estape, Anna; Fernandez, Esther; Mullauer, Barbara; Groeneveld, Rianne; Slobodnyuk, Konstantin; Stephan-Otto Attolini, Camille; Saura, Cristina; Arribas, Joaquin; Cortes, Javier; Rovira, Ana; Munoz, Montse; Lluch, Ana; Serra, Violeta; Albanell, Joan; Prat, Aleix; Nebreda, Angel R.; Aznar Benitah, Salvador; Gomis, Roger R.

研究方向