Verena Chung

Sage Bionetworks

H指数:19

被引数:1,506

个人简介

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OpenChallenges: A FAIR-aligned, centralized platform for crowdsourced challenges in biomedical research

OpenChallenges：一个与FAIR原则对齐的、用于生物医学研究众包挑战的集中化平台

Patterns

IF7.4

2026-06-240

OAAI

Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research

微生物组早产DREAM挑战赛：通过众包机器学习方法推动早产研究进展

Cell Reports Medicine

IF10.6

2025-11-070

OAAI

Jonathan L. Golob; Tomiko T. Oskotsky; Alice S. Tang; Alennie Roldan; Verena Chung; Connie W.Y. Ha; Ronald J. Wong; Kaitlin J. Flynn; Rong Chai; Claire Dubin; Antonio Parraga-Leo; Camilla Wibrand; Samuel S. Minot; Boris Oskotsky; Gaia Andreoletti; Idit Kosti; Julie Bletz; Amber Nelson; Jifan Gao; Zhoujingpeng Wei; Guanhua Chen; Zheng-Zheng Tang; Pierfrancesco Novielli; Donato Romano; Ester Pantaleo; Nicola Amoroso; Alfonso Monaco; Mirco Vacca; Maria De Angelis; Roberto Bellotti; Sabina Tangaro; Zehua Wang; Jiaming Yao; Akhil Goel; Jiangyue Mao; Huiqian Wang; Yuci Zhang; Ambuj Tewari; Abigail Kuntzleman; Isaac Bigcraft; Stephen Techtmann; Daehun Bae; Eunyoung Kim; Jongbum Jeon; Soobok Joe; Kevin R. Theis; Sherrianne Ng; Yun S. Lee; Patricia Diaz-Gimeno; Phillip R. Bennett; David A. MacIntyre; Gustavo Stolovitzky; Susan V. Lynch; Jake Albrecht; Nardhy Gomez-Lopez; Roberto Romero; David K. Stevenson; Nima Aghaeepour; Adi L. Tarca; James C. Costello; Marina Sirota

BraTS-Pathology 2024: Insights and Future Directions Informed by the AI-RANO & RANO-RGP Effort to Assess Glioblastoma Heterogeneity

BraTS-Pathology 2024：基于AI-RANO与RANO-RGP评估胶质母细胞瘤异质性的见解与未来方向

NEURO-ONCOLOGY

IF13.4

2025-11-010

OAAI

Thakur, Siddhesh; Malec, Sylwia; Pitarc, Carla; Linardos, Akis; Innani, Shubham; Adap, Sanyukta; Faghani, Shahriar; Moassefi, Mana; Nasrallah, Maclean; Ahrendsen, Jared; Barresi, Valeria; Gubbiotti, Maria; Lopez, Giselle; Lucas, Calixto-Hope G.; Chung, Verena; Karargyris, Alexandros; Kassem, Hasan; Miller, Michael; Pati, Sarthak; Baheti, Bhakti; Wodzinski, Marek; Muller, Henning; Zhang, Juexin; Weng, Ying; Chen, Ke; Kumar, Rithik; Vinit, Vinit; Arora, Madhav; Dhingra, Twinkle; Zahra, Syed Rameem; Gupta, Ankur; Sandino, Alvaro; Tiwari, Pallawi; Cooper, Lee; Huse, Jason; Bell, Robert; Bakas, Spyridon

Towards fair decentralized benchmarking of healthcare AI algorithms with the Federated Tumor Segmentation (FeTS) challenge

通过联合肿瘤分割 (FeTS) 挑战实现医疗AI算法的公平分散基准测试

Nature Communications

IF15.7

2025-07-080

OAAI

Maximilian Zenk; Ujjwal Baid; Sarthak Pati; Akis Linardos; Brandon Edwards; Micah Sheller; Patrick Foley; Alejandro Aristizabal; David Zimmerer; Alexey Gruzdev; Jason Martin; Russell T. Shinohara; Annika Reinke; Fabian Isensee; Santhosh Parampottupadam; Kaushal Parekh; Ralf Floca; Hasan Kassem; Bhakti Baheti; Siddhesh Thakur; Verena Chung; Kaisar Kushibar; Karim Lekadir; Meirui Jiang; Youtan Yin; Hongzheng Yang; Quande Liu; Cheng Chen; Qi Dou; Pheng-Ann Heng; Xiaofan Zhang; Shaoting Zhang; Muhammad Irfan Khan; Mohammad Ayyaz Azeem; Mojtaba Jafaritadi; Esa Alhoniemi; Elina Kontio; Suleiman A. Khan; Leon Mächler; Ivan Ezhov; Florian Kofler; Suprosanna Shit; Johannes C. Paetzold; Timo Loehr; Benedikt Wiestler; Himashi Peiris; Kamlesh Pawar; Shenjun Zhong; Zhaolin Chen; Munawar Hayat; Gary Egan; Mehrtash Harandi; Ece Isik Polat; Gorkem Polat; Altan Kocyigit; Alptekin Temizel; Anup Tuladhar; Lakshay Tyagi; Raissa Souza; Nils D. Forkert; Pauline Mouches; Matthias Wilms; Vishruth Shambhat; Akansh Maurya; Shubham Subhas Danannavar; Rohit Kalla; Vikas Kumar Anand; Ganapathy Krishnamurthi; Sahil Nalawade; Chandan Ganesh; Ben Wagner; Divya Reddy; Yudhajit Das; Fang F. Yu; Baowei Fei; Ananth J. Madhuranthakam; Joseph Maldjian; Gaurav Singh; Jianxun Ren; Wei Zhang; Ning An; Qingyu Hu; Youjia Zhang; Ying Zhou; Vasilis Siomos; Giacomo Tarroni; Jonathan Passerrat-Palmbach; Ambrish Rawat; Giulio Zizzo; Swanand Ravindra Kadhe; Jonathan P. Epperlein; Stefano Braghin; Yuan Wang; Renuga Kanagavelu; Qingsong Wei; Yechao Yang; Yong Liu; Krzysztof Kotowski; Szymon Adamski; Bartosz Machura; Wojciech Malara; Lukasz Zarudzki; Jakub Nalepa; Yaying Shi; Hongjian Gao; Salman Avestimehr; Yonghong Yan; Agus S. Akbar; Ekaterina Kondrateva; Hua Yang; Zhaopei Li; Hung-Yu Wu; Johannes Roth; Camillo Saueressig; Alexandre Milesi; Quoc D. Nguyen; Nathan J. Gruenhagen; Tsung-Ming Huang; Jun Ma; Har Shwinder H. Singh; Nai-Yu Pan; Dingwen Zhang; Ramy A. Zeineldin; Michal Futrega; Yading Yuan; Gian Marco Conte; Xue Feng; Quan D. Pham; Yong Xia; Zhifan Jiang; Huan Minh Luu; Mariia Dobko; Alexandre Carré; Bair Tuchinov; Hassan Mohy-ud-Din; Saruar Alam; Anup Singh; Nameeta Shah; Weichung Wang; Chiharu Sako; Michel Bilello; Satyam Ghodasara; Suyash Mohan; Christos Davatzikos; Evan Calabrese; Jeffrey Rudie; Javier Villanueva-Meyer; Soonmee Cha; Christopher Hess; John Mongan; Madhura Ingalhalikar; Manali Jadhav; Umang Pandey; Jitender Saini; Raymond Y. Huang; Ken Chang; Minh-Son To; Sargam Bhardwaj; Chee Chong; Marc Agzarian; Michal Kozubek; Filip Lux; Jan Michálek; Petr Matula; Miloš Ker^kovský; Tereza Kopr^ivová; Marek Dostál; Václav Vybíhal; Marco C. Pinho; James Holcomb; Marie Metz; Rajan Jain; Matthew D. Lee; Yvonne W. Lui; Pallavi Tiwari; Ruchika Verma; Rohan Bareja; Ipsa Yadav; Jonathan Chen; Neeraj Kumar; Yuriy Gusev; Krithika Bhuvaneshwar; Anousheh Sayah; Camelia Bencheqroun; Anas Belouali; Subha Madhavan; Rivka R. Colen; Aikaterini Kotrotsou; Philipp Vollmuth; Gianluca Brugnara; Chandrakanth J. Preetha; Felix Sahm; Martin Bendszus; Wolfgang Wick; Abhishek Mahajan; Carmen Balaña; Jaume Capellades; Josep Puig; Yoon Seong Choi; Seung-Koo Lee; Jong Hee Chang; Sung Soo Ahn; Hassan F. Shaykh; Alejandro Herrera-Trujillo; Maria Trujillo; William Escobar; Ana Abello; Jose Bernal; Jhon Gómez; Pamela LaMontagne; Daniel S. Marcus; Mikhail Milchenko; Arash Nazeri; Bennett Landman; Karthik Ramadass; Kaiwen Xu; Silky Chotai; Lola B. Chambless; Akshitkumar Mistry; Reid C. Thompson; Ashok Srinivasan; J. Rajiv Bapuraj; Arvind Rao; Nicholas Wang; Ota Yoshiaki; Toshio Moritani; Sevcan Turk; Joonsang Lee; Snehal Prabhudesai; John Garrett; Matthew Larson; Robert Jeraj; Hongwei Li; Tobias Weiss; Michael Weller; Andrea Bink; Bertrand Pouymayou; Sonam Sharma; Tzu-Chi Tseng; Saba Adabi; Alexandre Xavier Falcão; Samuel B. Martins; Bernardo C. A. Teixeira; Flávia Sprenger; David Menotti; Diego R. Lucio; Simone P. Niclou; Olivier Keunen; Ann-Christin Hau; Enrique Pelaez; Heydy Franco-Maldonado; Francis Loayza; Sebastian Quevedo; Richard McKinley; Johannes Slotboom; Piotr Radojewski; Raphael Meier; Roland Wiest; Johannes Trenkler; Josef Pichler; Georg Necker; Andreas Haunschmidt; Stephan Meckel; Pamela Guevara; Esteban Torche; Cristobal Mendoza; Franco Vera; Elvis Ríos; Eduardo López; Sergio A. Velastin; Joseph Choi; Stephen Baek; Yusung Kim; Heba Ismael; Bryan Allen; John M. Buatti; Peter Zampakis; Vasileios Panagiotopoulos; Panagiotis Tsiganos; Sotiris Alexiou; Ilias Haliassos; Evangelia I. Zacharaki; Konstantinos Moustakas; Christina Kalogeropoulou; Dimitrios M. Kardamakis; Bing Luo; Laila M. Poisson; Ning Wen; Martin Vallières; Mahdi Ait Lhaj Loutfi; David Fortin; Martin Lepage; Fanny Morón; Jacob Mandel; Gaurav Shukla; Spencer Liem; Gregory S. Alexandre; Joseph Lombardo; Joshua D. Palmer; Adam E. Flanders; Adam P. Dicker; Godwin Ogbole; Dotun Oyekunle; Olubunmi Odafe-Oyibotha; Babatunde Osobu; Mustapha Shu’aibu Hikima; Mayowa Soneye; Farouk Dako; Adeleye Dorcas; Derrick Murcia; Eric Fu; Rourke Haas; John A. Thompson; David Ryan Ormond; Stuart Currie; Kavi Fatania; Russell Frood; Amber L. Simpson; Jacob J. Peoples; Ricky Hu; Danielle Cutler; Fabio Y. Moraes; Anh Tran; Mohammad Hamghalam; Michael A. Boss; James Gimpel; Deepak Kattil Veettil; Kendall Schmidt; Lisa Cimino; Cynthia Price; Brian Bialecki; Sailaja Marella; Charles Apgar; Andras Jakab; Marc-André Weber; Errol Colak; Jens Kleesiek; John B. Freymann; Justin S. Kirby; Lena Maier-Hein; Jake Albrecht; Peter Mattson; Alexandros Karargyris; Prashant Shah; Bjoern Menze; Klaus Maier-Hein; Spyridon Bakas

BRATS-PATH: ASSESSING HETEROGENEOUS HISTOPATHOLOGIC REGIONS IN GLIOBLASTOMA

NEURO-ONCOLOGY

IF13.4

2024-11-110

PRE

Community assessment of methods to deconvolve cellular composition from bulk gene expression

NATURE COMMUNICATIONS

IF15.7

2024-08-270

OAAI

White, Brian S.; de Reynies, Aurelien; Newman, Aaron M.; Waterfall, Joshua J.; Lamb, Andrew; Petitprez, Florent; Lin, Yating; Yu, Rongshan; Guerrero-Gimenez, Martin E.; Domanskyi, Sergii; Monaco, Gianni; Chung, Verena; Banerjee, Jineta; Derrick, Daniel; Valdeolivas, Alberto; Li, Haojun; Xiao, Xu; Wang, Shun; Zheng, Frank; Yang, Wenxian; Catania, Carlos A.; Lang, Benjamin J.; Bertus, Thomas J.; Piermarocchi, Carlo; Caruso, Francesca P.; Ceccarelli, Michele; Yu, Thomas; Guo, Xindi; Bletz, Julie; Coller, John; Maecker, Holden; Duault, Caroline; Shokoohi, Vida; Patel, Shailja; Liliental, Joanna E.; Simon, Stockard; Saez-Rodriguez, Julio; Heiser, Laura M.; Guinney, Justin; Gentles, Andrew J.

A community challenge to predict clinical outcomes after immune checkpoint blockade in non-small cell lung cancer

预测非小细胞肺癌免疫检查点阻断后临床结果的社区挑战

JOURNAL OF TRANSLATIONAL MEDICINE

IF7.5

2024-02-214

OAAI

Mason, Mike; Lapuente-Santana, Oscar; Halkola, Anni S.; Wang, Wenyu; Mall, Raghvendra; Xiao, Xu; Kaufman, Jacob; Fu, Jingxin; Pfeil, Jacob; Banerjee, Jineta; Chung, Verena; Chang, Han; Chasalow, Scott D.; Lin, Hung Ying; Chai, Rongrong; Yu, Thomas; Finotello, Francesca; Mirtti, Tuomas; Mayranpaa, Mikko I.; Bao, Jie; Verschuren, Emmy W.; Ahmed, Eiman I.; Ceccarelli, Michele; Miller, Lance D.; Monaco, Gianni; Hendrickx, Wouter R. L.; Sherif, Shimaa; Yang, Lin; Tang, Ming; Gu, Shengqing Stan; Zhang, Wubing; Zhang, Yi; Zeng, Zexian; Das Sahu, Avinash; Liu, Yang; Yang, Wenxian; Bedognetti, Davide; Tang, Jing; Eduati, Federica; Laajala, Teemu D.; Geese, William J.; Guinney, Justin; Szustakowski, Joseph D.; Vincent, Benjamin G.; Carbone, David P.

Microbiome preterm birth DREAM challenge Crowdsourcing machine learning approaches to advance preterm birth research

微生物组早产梦挑战众包机器学习方法推进早产研究

CELL REPORTS MEDICINE

IF10.6

2024-01-016

OAAI

Golob, Jonathan L.; Oskotsky, Tomiko T.; Tang, Alice S.; Roldan, Alennie; Chung, Verena; Ha, Connie W. Y.; Wong, Ronald J.; Flynn, Kaitlin J.; Parraga-Leo, Antonio; Wibrand, Camilla; Minot, Samuel S.; Oskotsky, Boris; Andreoletti, Gaia; Kosti, Idit; Bletz, Julie; Nelson, Amber; Gao, Jifan; Wei, Zhoujingpeng; Chen, Guanhua; Tang, Zheng-Zheng; Novielli, Pierfrancesco; Romano, Donato; Pantaleo, Ester; Amoroso, Nicola; Monaco, Alfonso; Vacca, Mirco; De Angelis, Maria; Bellotti, Roberto; Tangaro, Sabina; Kuntzleman, Abigail; Bigcraft, Isaac; Techtmann, Stephen; Bae, Daehun; Kim, Eunyoung; Jeon, Jongbum; Joe, Soobok; Theis, Kevin R.; Ng, Sherriann; Lee, Yun S.; Diaz-Gimeno, Patricia; Bennett, Phillip R.; MacIntyre, David A.; Stolovitzky, Gustavo; Lynch, Susan V.; Albrecht, Jake; Gomez-Lopez, Nardhy; Romero, Roberto; Stevenson, David K.; Aghaeepour, Nima; Tarca, Adi L.; Costello, James C.; Sirota, Marina

Federated benchmarking of medical artificial intelligence with MedPerf

NATURE MACHINE INTELLIGENCE

IF23.9

2023-07-1722

OAAI

Karargyris, Alexandros; Umeton, Renato; Sheller, Micah J.; Aristizabal, Alejandro; George, Johnu; Wuest, Anna; Pati, Sarthak; Kassem, Hasan; Zenk, Maximilian; Baid, Ujjwal; Moorthy, Prakash Narayana; Chowdhury, Alexander; Guo, Junyi; Nalawade, Sahil; Rosenthal, Jacob; Kanter, David; Xenochristou, Maria; Beutel, Daniel J.; Chung, Verena; Bergquist, Timothy; Eddy, James; Abid, Abubakar; Tunstall, Lewis; Sanseviero, Omar; Dimitriadis, Dimitrios; Qian, Yiming; Xu, Xinxing; Liu, Yong; Goh, Rick Siow Mong; Bala, Srini; Bittorf, Victor; Puchala, Sreekar Reddy; Ricciuti, Biagio; Samineni, Soujanya; Sengupta, Eshna; Chaudhari, Akshay; Coleman, Cody; Desinghu, Bala; Diamos, Gregory; Dutta, Debo; Feddema, Diane; Fursin, Grigori; Huang, Xinyuan; Kashyap, Satyananda; Lane, Nicholas; Mallick, Indranil; Mascagni, Pietro; Mehta, Virendra; Moraes, Cassiano Ferro; Natarajan, Vivek; Nikolov, Nikola; Padoy, Nicolas; Pekhimenko, Gennady; Reddi, Vijay Janapa; Reina, G. Anthony; Ribalta, Pablo; Singh, Abhishek; Thiagarajan, Jayaraman J.; Albrecht, Jacob; Wolf, Thomas; Miller, Geralyn; Fu, Huazhu; Shah, Prashant; Xu, Daguang; Yadav, Poonam; Talby, David; Awad, Mark M.; Howard, Jeremy P.; Rosenthal, Michael; Marchionni, Luigi; Loda, Massimo; Johnson, Jason M.; Bakas, Spyridon; Mattson, Peter

A community challenge for a pancancer drug mechanism of action inference from perturbational profile data

CELL REPORTS MEDICINE

IF10.6

2022-01-0127

OAAI

Cell-to-cell and type-to-type heterogeneity of signaling networks: insights from the crowd

MOLECULAR SYSTEMS BIOLOGY

IF7.7

2021-10-1810

OAAI

Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees

CELL SYSTEMS

IF7.7

2021-08-0129

OAAI

Gong, Wuming; Granados, Alejandro A.; Hu, Jingyuan; Jones, Matthew G.; Raz, Ofir; Salvador-Martinez, Irepan; Zhang, Hanrui; Chow, Ke-Huan K.; Kwak, Il-Youp; Retkute, Renata; Prusokiene, Alisa; Prusokas, Augustinas; Khodaverdian, Alex; Zhang, Richard; Rao, Suhas; Wang, Robert; Rennert, Phil; Saipradeep, Vangala G.; Sivadasan, Naveen; Rao, Aditya; Joseph, Thomas; Srinivasan, Rajgopal; Peng, Jiajie; Han, Lu; Shang, Xuequn; Garry, Daniel J.; Yu, Thomas; Chung, Verena; Mason, Michael; Liu, Zhandong; Guan, Yuanfang; Yosef, Nir; Shendure, Jay; Telford, Maximilian J.; Shapiro, Ehud; Elowitz, Michael B.; Meyer, Pablo

FlyRNAi.org-the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update

NUCLEIC ACIDS RESEARCH

IF13.1

2020-10-2639

OAAI

Tumor-Derived Ligands Trigger Tumor Growth and Host Wasting via Differential MEK Activation

DEVELOPMENTAL CELL

IF8.7

2019-01-0153