Prem P. Chapagain - Publications, H-index & Citations

Prem P. Chapagain

Florida International University

31H指数

251论文数

2.8K被引数

收录论文 90

发表时间

Structural Remodeling of TCR–HLA-DQ8 Recognition by a β-Cell Stress-Associated C19S Insulin Neoepitope in Type 1 Diabetes 1型糖尿病中，由β细胞应激相关的C19S胰岛素新表位介导的TCR–HLA-DQ8识别的结构重塑

International Journal of Molecular Sciences

IF4.9

2026-07-24

OAAI

Rahul Mittal; Farhad Alipour; Prem Chapagain; Khemraj Hirani

Structural Modulation and Binding of HLA-DQ8 by Cysteine-to-Serine Mutated Insulin Peptide: Insights from Molecular Dynamics Simulations 半胱氨酸突变为丝氨酸的胰岛素肽对HLA-DQ8的结构调控与结合：分子动力学模拟的见解

International Journal of Molecular Sciences

IF4.9

2026-05-28

OAAI

Rahul Mittal; Ukesh Karki; Joana R. N. Lemos; Prem Chapagain; Khemraj Hirani

Phosphorylation-Dependent Structure and Dynamics of Caveolin-1 8S Complex 磷酸化依赖的 Caveolin-1 8S 复合物结构与动力学

Biophysical Journal

IF3.1

2026-05-06

PREAI

Ukesh Karki; Sadeq Shabani; Prabin Dahal; Cathy Padilla; Joshua Hutcheson; Prem Chapagain

SPNS2 exports sphingosine-1-phosphate and imports glucose SPNS2外排鞘氨醇-1-磷酸并摄取葡萄糖

Nature Communications

IF15.7

2026-04-20

OAAI

Cynthia Weigel; Md Lokman Hossen; Ryan D. R. Brown; Can E. Senkal; Christopher D. Green; Jason Newton; Sumit Saha; Elisa N. D. Palladino; Bin Ni; Francesco S. Celi; Xianjun Fang; Frank D. Corwin; Huanyu Z. Li; David B. Sauer; Prem P. Chapagain; Sarah Spiegel

Probing the Dynamic Pore Formation of Antimicrobial Peptide in Nanoscale Lipid Membranes 探针抗菌肽在纳米尺度脂质膜中的动态孔形成

Analytical Chemistry

IF6.7

2026-04-06

PREAI

Zhe Wang; Hugo Perez; Prem Chapagain; Jin He

Structural Landscape of Syanodin I Lasso Peptide Synechodin I 环形系结肽的结构景观

Biochemistry

IF3

2026-04-01

PREAI

Santos-Fernandez, Miguel; Jeanne Dit Fouque, Kevin; Karki, Ukesh; Blond, Alain; Idir, Ryane; Asgharihosseinpour, Negin; Zirah, Severine; Chapagain, Prem; Mebel, Alexander M.; Hegemann, Julian D.; Fernandez-Lima, Francisco

BPS2026 – Investigating HDAC3 interactions with HDAC4 BPS2026 – 研究HDAC3与HDAC4的相互作用

Biophysical Journal

IF3.1

2026-02-19

PREAI

Narayan Gautam; Sophia Wang; Prem P. Chapagain; Narayan P. Adhikari; Purushottam B. Tiwari

Mapping Native Peptide–Peptide Noncovalent Interactions: Insights from Trapped Ion Mobility Spectrometry; Electron- and UV-Fragmentation; Tandem Mass Spectrometry; and Molecular Dynamics 绘制天然肽-肽非共价相互作用: 捕获离子迁移谱的见解; 电子和UV片段化; 串联质谱; 和分子动力学

Journal of the American Society for Mass Spectrometry

IF2.7

2026-02-03

PREAI

Miguel Santos-Fernandez; Kevin Jeanne Dit Fouque; Samuel Silva da Rocha Pita; Prem P. Chapagain; Fenfei Leng; Francisco Fernandez-Lima

EMoMiS: A pipeline for epitope-based molecular mimicry search in protein structures with potential applications to SARS-CoV-2

Computational and Structural Biotechnology Journal

IF4.1

2026-02-02

OAAI

Vitalii Stebliankin; Rajeshwari Chellappan; Prabin Baral; Christian Balbin; Janelle Nunez-Castilla; Masrur Sobhan; Trevor Cickovski; Ashleigh N. Riegler; Ananda Mohan Mondal; Jessica Siltberg-Liberles; Prem Chapagain; Sathibalan Ponniah; Sixto M. Leal; Kalai Mathee; Giri Narasimhan

Lasso Peptide Syanodin I: Loop-Pulling Two-Step Thermal Unthreading Mechanism

ANALYTICAL CHEMISTRY

IF6.7

2025-10-01

PREAI

Santos-Fernandez, Miguel; Jeanne Dit Fouque, Kevin; Karki, Ukesh; Blond, Alain; Zirah, Severine; Chapagain, Prem P.; Hegemann, Julian D.; Fernandez-Lima, Francisco

Variants of the Ebola virus matrix protein VP40 have differential effects on oligomerization and plasma membrane interactions 埃博拉病毒基质蛋白VP40的不同变异体对寡聚化和质膜相互作用具有差异性影响

Journal of Biological Chemistry

IF3.9

2025-07-16

OAAI

Balindile B. Motsa; Barsha Bhowal; Yogesh B. Narkhede; Ukesh Karki; Valentina Toro Ramirez; Samuel W. Eger; Olaf Wiest; Prem P. Chapagain; Robert V. Stahelin

Inhibition of HMGA2 binding to AT-rich DNA by its negatively charged C-terminus HMGA2通过其带负电荷的C末端抑制其与AT富集DNA的结合

NUCLEIC ACIDS RESEARCH

IF13.1

2025-01-28

OAAI

Su, Linjia; Deng, Zifang; Santos-Fernandez, Miguel; Fouque, Kevin Jeanne Dit; Chapagain, Prem P.; Chambers, Jeremy W.; Leng, Fenfei

Design of a stapled peptide that binds to the Ebola virus matrix protein dimer interface 一种靶向埃博拉病毒基质蛋白二聚体界面的 stapled peptide 的设计

RSC CHEMICAL BIOLOGY

IF3.1

2025-01-01

OAAI

Saxena, Roopashi; Wright, Madison M.; Rathman, Benjamin M.; Karki, Ukesh; Chapagain, Prem P.; Stahelin, Robert V.

Characterization of molecular interactions between HDAC7 and MEF2A HDAC7与MEF2A分子间相互作用的表征

biomolecular structure dynamics

IF0

2024-12-11

PREAI

Narayan Gautam; Prem P. Chapagain; Narayan P. Adhikari; Purushottam B. Tiwari

Simulation-Guided Molecular Modeling of Nisin and Lipid II Assembly and Membrane Pore Formation

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2024-10-07

PREAI

Perez, Hugo A.; Wang, Zhe; Gerstman, Bernard S.; He, Jin; Chapagain, Prem P.

Structure-Activity Relationship of Pyrrolidine Pentamine Derivatives as Inhibitors of the Aminoglycoside 6′-N-Acetyltransferase Type Ib

ANTIBIOTICS-BASEL

IF4.6

2024-07-19

OAAI

Sklenicka, Jan; Tran, Tung; Ramirez, Maria S.; Donow, Haley M.; Magana, Angel J.; Lavoi, Travis; Mamun, Yasir; Jimenez, Veronica; Chapagain, Prem; Santos, Radleigh; Pinilla, Clemencia; Giulianotti, Marc A.; Tolmasky, Marcelo E.

Insights into the DNA and RNA Interactions of Human Topoisomerase III Beta Using Molecular Dynamics Simulations

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2024-07-18

PREAI

Mamun, Yasir; Tse-Dinh, Yuk-Ching; Chapagain, Prem

Minor electrostatic changes robustly increase VP40 membrane binding, assembly, and budding of Ebola virus matrix protein derived virus-like particles

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2024-05-01

OAAI

Motsa, Balindile B.; Sharma, Tej; Cioffi, Michael D.; Chapagain, Prem P.; Stahelin, Robert, V

The natural history and genotype-phenotype correlations of TMPRSS3 hearing loss: an international, multi-center, cohort analysis

HUMAN GENETICS

IF3.6

2024-04-30

OAAI

Colbert, Brett M.; Lanting, Cris; Smeal, Molly; Blanton, Susan; Dykxhoorn, Derek M.; Tang, Pei-Ciao; Getchell, Richard L.; Velde, Hedwig; Fehrmann, Mirthe; Thorpe, Ryan; Chapagain, Prem; Elkhaligy, Heidy; Kremer, Hannie; Yntema, Helger; Haer-Wigman, Lonneke; Redfield, Shelby; Sun, Tieqi; Bruijn, Saskia; Plomp, Astrid; Goderie, Thade; van de Kamp, Jiddeke; Free, Rolien H.; Wassink-Ruiter, Jolien Klein; Widdershoven, Josine; Vanhoutte, Els; Rotteveel, Liselotte; Kriek, Marjolein; van Dooren, Marieke; Hoefsloot, Lies; de Gier, Heriette H. W.; Aten, E.; Widdershoven, J. C. C.; Hof, J. R.; Hellingman, K.; Vernimmen, V.; Kremer, H.; Pennings, R. J. E.; Feenstra, I.; Lanting, C. P.; Yntema, H. G.; Cals, F. L. J.; Haer-Wigman, L.; Free, R. H.; Wassink-Ruiter, J. S. Klein; Smit, A. L.; van den Boogaard, M. J.; Lachmeier, A. M. A.; Smits, J. J.; Ebbens, F. A.; Maas, S. M.; Plomp, A.; Goderie, T. P. M.; Merkus, P.; van de Kamp, J.; Schaefer, Amanda; Kolbe, Diana; Azaiez, Hela; Rabie, Grace; Aburayyan, Armal; Kawas, Mariana; Kanaan, Moien; Holder, Jourdan; Usami, Shin-ichi; Chen, Zhengyi; Dai, Pu; Holt, Jeffrey; Nelson, Rick; Choi, Byung Yoon; Shearer, Eliot; Smith, Richard J. H.; Pennings, Ronald; Liu, Xue Zhong

Role of phosphatidic acid lipids on plasma membrane association of the Ebola virus matrix protein VP40

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

IF3.3

2024-04-01

OAAI

Cioffi, Michael D.; Husby, Monica L.; Gerstman, Bernard S.; Stahelin, Robert, V; Chapagain, Prem P.

研究方向