Joon‐Yong Lee - Publications, H-index & Citations

Joon‐Yong Lee

prognomiq inc

23H指数

1.6K论文数

2.0K被引数

收录论文 29

发表时间

Metaproteomics uncovers the functional capacity of a soil microbiome 元蛋白质组学揭示土壤微生物群的功能能力

Scientific Reports

IF3.9

2026-04-17

OAAI

Yuqian Gao; Joonhoon Kim; Ruonan Wu; Niaz Bahar Chowdhury; Joon-Yong Lee; Carrie D. Nicora; Ronald J. Moore; Matthew E. Monroe; Janet K. Jansson; Kristin E. Burnum-Johnson

Coupling flux balance analysis with reactive transport modeling through machine learning for rapid and stable simulation of microbial metabolic switching 通过机器学习将通量平衡分析与反应性运输建模耦合，以快速稳定地模拟微生物代谢切换

SCIENTIFIC REPORTS

IF3.9

2025-02-19

OAAI

Song, Hyun-Seob; Ahamed, Firnaaz; Lee, Joon-Yong; Henry, Christopher S.; Edirisinghe, Janaka N.; Nelson, William C.; Chen, Xingyuan; Moulton, J. David; Scheibe, Timothy D.

timsTOF HT Improves Protein Identification and Quantitative Reproducibility for Deep Unbiased Plasma Protein Biomarker Discovery

JOURNAL OF PROTEOME RESEARCH

IF3.6

2024-01-15

OAAI

Vitko, Dijana; Chou, Wan-Fang; Golmaei, Sara Nouri; Lee, Joon-Yong; Belthangady, Chinmay; Blume, John; Chan, Jessica K.; Flores-Campuzano, Guillermo; Hu, Yuntao; Liu, Manway; Marispini, Mark A.; Mora, Megan G.; Ramaswamy, Saividya; Ranjan, Purva; Williams, Preston B.; Zawada, Robert J. X.; Ma, Philip; Wilcox, Bruce E.

mzapy: An Open-Source Python Library Enabling Efficient Extraction and Processing of Ion Mobility Spectrometry-Mass Spectrometry Data in the MZA File Format

ANALYTICAL CHEMISTRY

IF6.7

2023-06-12

PREAI

Ross, Dylan; Bilbao, Aivett; Lee, Joon-Yong; Zheng, Xueyun

Dilated causal convolutional neural networks for forecasting zone airflow to estimate short-term energy consumption

ENERGY AND BUILDINGS

IF7.1

2023-05-01

OAAI

Tully, Joseph; Haight, Ryan; Hutchinson, Brian; Huang, Sen; Lee, Joon-Yong; Katipamula, Srinivas

LipidOz enables automated elucidation of lipid carbon-carbon double bond positions from ozone-induced dissociation mass spectrometry data

COMMUNICATIONS CHEMISTRY

IF6.2

2023-04-19

OAAI

Ross, Dylan H.; Lee, Joon-Yong; Bilbao, Aivett; Orton, Daniel J.; Eder, Josie G.; Burnet, Meagan C.; Deatherage Kaiser, Brooke L.; Kyle, Jennifer E.; Zheng, Xueyun

Biomarker discovery in non-small-cell lung cancer enabled by deep multi-omics profiling of proteins, metabolites, transcripts, and genes in blood

CANCER RESEARCH

IF16.6

2023-04-04

PREAI

Choi, Jinlyung; Kokate, Ajinkya; Khaledian, Ehdieh; Liu, Manway; Prasad, Preethi; Blume, John; Chan, Jessica; Cuaresma, Rea; Dai, Kevin; Khadka, Manoj; Khin, Thidar; Kodama, Yuya; Lee, Joon-Yong; Malekpour, Hoda; Mora, Megan; Mudaliar, Nithya; Golmaei, Sara Nouri; Ramaiah, Madhuvanthi; Ramaswamy, Saividya; Spiro, Peter; Vitko, Dijana; Swaminathan, Kavya; Yee, James; Young, Brian; Belthangady, Chinmay; Wilcox, Bruce; Koh, Brian; Ma, Philip

A multi-omics classifier achieves high sensitivity and specificity for pancreatic ductal adenocarcinoma in a case-control study of 146 subjects

CANCER RESEARCH

IF16.6

2023-04-04

PREAI

Blume, John; Bundalian, Ghristine; Chan, Jessica; Chao-Shern, Connie; Choi, Jinlyung; Cuaresma, Rea; Dai, Kevin; Golmaei, Sara N.; Jang, Jun Heok; Khadka, Manoj; Khaledian, Ehdieh; Khin, Thidar; Kodama, Yuya; Kokate, Ajinkya; Lee, Joon-Yong; Liu, Manway; Malekpour, Hoda; Mora, Megan; Mudaliar, Nithya; Prasad, Preethi; Ramaiah, Madhuvanthi; Ramaswamy, Saividya; Spiro, Peter; Swaminathan, Kavya; Vitko, Dijana; Yee, James; Young, Brian; Zhang, Susan; Belthangady, Chinmay; Wilcox, Bruce; Koh, Brian; Ma, Philip

MZA: A Data Conversion Tool to Facilitate Software Development and Artificial Intelligence Research in Multidimensional Mass Spectrometry

JOURNAL OF PROTEOME RESEARCH

IF3.6

2022-11-22

OAAI

Bilbao, Aivett; Ross, Dylan H.; Lee, Joon-Yong; Donor, Micah T.; Williams, Sarah M.; Zhu, Ying; Ibrahim, Yehia M.; Smith, Richard D.; Zheng, Xueyun

Interaction Networks Are Driven by Community-Responsive Phenotypes in a Chitin-Degrading Consortium of Soil Microbes

MSYSTEMS

IF4.6

2022-10-26

OAAI

McClure, Ryan; Farris, Yuliya; Danczak, Robert; Nelson, William; Song, Hyun-Seob; Kessell, Aimee; Lee, Joon-Yong; Couvillion, Sneha; Henry, Christopher; Jansson, Janet K.; Hofmockel, Kirsten S.

SimELIT: A Novel GUI-Based Comprehensive Ion Trajectory Simulation Software for Mass Spectrometry

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

IF2.7

2022-07-19

OAAI

Giberson, Cameron; Singh, Rajesh K.; Chun, Jaehun; Huntley, Adam P.; Zhong, Jason; Ibrahim, Yehia M.; Schenter, Gregory K.; Lee, Joon-Yong; Garimella, Sandilya V. B.

Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics 使用从头元蛋白质组学揭示土壤微生物组的隐藏成员和功能

JOURNAL OF PROTEOME RESEARCH

IF3.6

2022-07-06

OAAI

Lee, Joon-Yong; Mitchell, Hugh D.; Burnet, Meagan C.; Wu, Ruonan; Jenson, Sarah C.; Merkley, Eric D.; Nakayasu, Ernesto S.; Nicora, Carrie D.; Jansson, Janet K.; Burnum-Johnson, Kristin E.; Payne, Samuel H.

A global lipid map reveals host dependency factors conserved across SARS-CoV-2 variants

NATURE COMMUNICATIONS

IF15.7

2022-06-17

OAAI

Farley, Scotland E.; Kyle, Jennifer E.; Leier, Hans C.; Bramer, Lisa M.; Weinstein, Jules B.; Bates, Timothy A.; Lee, Joon-Yong; Metz, Thomas O.; Schultz, Carsten; Tafesse, Fikadu G.

Vaccination before or after SARS-CoV-2 infection leads to robust humoral response and antibodies that effectively neutralize variants

SCIENCE IMMUNOLOGY

IF16.3

2022-02-18

216

OAAI

Bates, Timothy A.; McBride, Savannah K.; Leier, Hans C.; Guzman, Gaelen; Lyski, Zoe L.; Schoen, Devin; Winders, Bradie; Lee, Joon-Yong; Lee, David Xthona; Messer, William B.; Curlin, Marcel E.; Tafesse, Fikadu G.

Improving Signal to Noise Ratios in Ion Mobility Spectrometry and Structures for Lossless Ion Manipulations (SLIM) using a High Dynamic Range Analog-to-Digital Converter

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

IF2.7

2021-09-30

OAAI

Hollerbach, Adam L.; Giberson, Cameron M.; Lee, Joon-Yong; Huntley, Adam P.; Smith, Richard D.; Ibrahim, Yehia M.

A Fungal Secretome Adapted for Stress Enabled a Radical Wood Decay Mechanism

MBIO

IF4.7

2021-08-31

OAAI

Castano, Jesus; Zhang, Jiwei; Zhou, Mowei; Tsai, Chia-Feng; Lee, Joon Yong; Nicora, Carrie; Schilling, Jonathan

Sequence-to-sequence neural networks for short-term electrical load forecasting in commercial office buildings 用于商业办公楼短期电力负荷预测的序列到序列神经网络

ENERGY AND BUILDINGS

IF7.1

2020-11-01

OAAI

Skomski, Elliott; Lee, Joon-Yong; Kim, Woohyun; Chandan, Vikas; Katipamula, Srinivas; Hutchinson, Brian

Ion Mobility Spectrometry with High Ion Utilization Efficiency Using Traveling Wave-Based Structures for Lossless Ion Manipulations

ANALYTICAL CHEMISTRY

IF6.7

2020-10-26

OAAI

Li, Ailin; Nagy, Gabe; Conant, Christopher R.; Norheim, Randolph, V; Lee, Joon Yong; Giberson, Cameron; Hollerbach, Adam L.; Prabhakaran, Venkateshkumar; Attah, Isaac K.; Chouinard, Christopher D.; Prabhakaran, Aneesh; Smith, Richard D.; Ibrahim, Yehia M.; Garimella, Sandilya V. B.

Representing Organic Matter Thermodynamics in Biogeochemical Reactions via Substrate-Explicit Modeling

FRONTIERS IN MICROBIOLOGY

IF4.5

2020-10-23

OAAI

Song, Hyun-Seob; Stegen, James C.; Graham, Emily B.; Lee, Joon-Yong; Garayburu-Caruso, Vanessa A.; Nelson, William C.; Chen, Xingyuan; Moulton, J. David; Scheibe, Timothy D.

A global lipid map defines a network essential for Zika virus replication

NATURE COMMUNICATIONS

IF15.7

2020-07-21

OAAI

Leier, Hans C.; Weinstein, Jules B.; Kyle, Jennifer E.; Lee, Joon-Yong; Bramer, Lisa M.; Stratton, Kelly G.; Kempthorne, Douglas; Navratil, Aaron R.; Tafesse, Endale G.; Hornemann, Thorsten; Messer, William B.; Dennis, Edward A.; Metz, Thomas O.; Barklis, Eric; Tafesse, Fikadu G.

研究方向