Thomas Shimizu - Publications, H-index & Citations

Thomas Shimizu

amolf institute

27H指数

2.8K论文数

6.9K被引数

收录论文 24

发表时间

Global density and biomass of arbuscular mycorrhizal fungal networks 全球丛枝菌根真菌网络的密度和生物量

Science

IF45.8

2026-06-11

PREAI

Justin D. Stewart; Corentin Bisot; Rachael I. M. Cargill; Michael E. Van Nuland; Heidi-Jayne Hawkins; Loreto Oyarte Galvez; Malin Klein; Marije van Son; Victoria Terry; Louis Paré; Claudia Banchini; Franck Stefani; Felix Kahane; Kai-Kai Lin; Renato K. Braghiere; Katie J. Field; Nadejda A. Soudzilovskaia; Jinsu Elhance; Vasilis Kokkoris; Merlin Sheldrake; James T. Weedon; Thomas S. Shimizu; Stuart West; E. Toby Kiers

Spontaneous switching in a protein signalling array reveals near-critical cooperativity 蛋白质信号阵列中的自发转换揭示了近临界的协同性

Nature Physics

IF18.4

2026-01-29

OAAI

Johannes M. Keegstra; Fotios Avgidis; Evan Usher; Yuval Mulla; John S. Parkinson; Thomas S. Shimizu

Nongenetic adaptation by collective migration 非遗传适应通过集体迁移

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2025-02-19

OAAI

Vo, Lam; Avgidis, Fotios; Mattingly, Henry H.; Edmonds, Karah; Burger, Isabel; Balasubramanian, Ravi; Shimizu, Thomas S.; Kazmierczak, Barbara I.; Emonet, Thierry

The potential of strigolactones to shift competitive dynamics among two Rhizophagus irregularis strains 条纹肌内酯在两种根瘤菌菌株之间转移竞争动力学的潜力

FRONTIERS IN MICROBIOLOGY

IF4.5

2024-10-18

OAAI

Klein, Malin; Bisot, Corentin; Galvez, Loreto Oyarte; Kokkoris, Vasilis; Shimizu, Thomas S.; Dong, Lemeng; Weedon, James T.; Bouwmeester, Harro; Kiers, E. Toby

Signal integration and adaptive sensory diversity tuning in Escherichia coli chemotaxis 大肠杆菌趋化性中的信号整合和适应性感官多样性调节

CELL SYSTEMS

IF7.7

2024-07-01

PREAI

Moore, Jeremy Philippe; Kamino, Keita; Kottou, Rafaela; Shimizu, Thomas S.; Emonet, Thierry

VASCULATURE Exploring the dynamics of vascular adaptation

ELIFE

IF0

2023-05-25

OAAI

Shimizu, Thomas S.; Kiers, E. Toby; Stone, Howard A.

Optimal inference of molecular interaction dynamics in FRET microscopy FRET显微镜中分子相互作用动力学的最佳推断

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2023-04-04

OAAI

Kamino, Keita; Kadakia, Nirag; Avgidis, Fotios; Liu, Zhe-Xuan; Aoki, Kazuhiro; Shimizu, Thomas S.; Emonet, Thierry

Ecology Letters

IF7.9

2021-12-31

OAAI

van't Padje, Anouk; Klein, Malin; Caldas, Victor; Galvez, Loreto Oyarte; Broersma, Cathleen; Hoebe, Nicky; Sanders, Ian R.; Shimizu, Thomas; Kiers, E. Toby

HI-NESS: a family of genetically encoded DNA labels based on a bacterial nucleoid-associated protein

NUCLEIC ACIDS RESEARCH

IF13.1

2021-11-04

OAAI

Rashid, Fatema-Zahra M.; Mahlandt, Eike; van der Vaart, Michiel; Boer, Daphne E. C.; Alvarez, Monica Varela; Henneman, Bram; Brocken, Daan J. W.; Voskamp, Patrick; Blok, Anneloes J.; Shimizu, Thomas S.; Meijer, Annemarie H.; Luijsterburg, Martijn S.; Goedhart, Joachim; Cremazy, Frederic G. E.; Dame, Remus T.

Adaptive tuning of cell sensory diversity without changes in gene expression 细胞感觉多样性的适应性调整，而不改变基因表达

SCIENCE ADVANCES

IF12.5

2020-11-13

OAAI

Kamino, K.; Keegstra, J. M.; Long, J.; Emonet, T.; Shimizu, T. S.

Temporal tracking of quantum-dot apatite across in vitro mycorrhizal networks shows how host demand can influence fungal nutrient transfer strategies

ISME JOURNAL

IF10

2020-09-28

OAAI

Van't Padje, Anouk; Oyarte Galvez, Loreto; Klein, Malin; Hink, Mark A.; Postma, Marten; Shimizu, Thomas; Kiers, E. Toby

Modelling the ballistic-to-diffusive transition in nematode motility reveals variation in exploratory behaviour across species

JOURNAL OF THE ROYAL SOCIETY INTERFACE

IF3.5

2019-08-28

OAAI

Helms, Stephen J.; Rozemuller, W. Mathijs; Costa, Antonio Carlos; Avery, Leon; Stephens, Greg J.; Shimizu, Thomas S.

Cell Boundary Confinement Sets the Size and Position of the E. coli Chromosome

CURRENT BIOLOGY

IF7.5

2019-07-01

OAAI

Wu, Fabai; Swain, Pinaki; Kuijpers, Louis; Zheng, Xuan; Felter, Kevin; Guurink, Margot; Solari, Jacopo; Jun, Suckjoon; Shimizu, Thomas S.; Chaudhuri, Debasish; Mulder, Bela; Dekker, Cees

Mycorrhizal Fungi Respond to Resource Inequality by Moving Phosphorus from Rich to Poor Patches across Networks

CURRENT BIOLOGY

IF7.5

2019-06-01

116

OAAI

Whiteside, Matthew D.; Werner, Gijsbert D. A.; Caldas, Victor E. A.; Van't Padje, Anouk; Dupin, Simon E.; Elbers, Bram; Bakker, Milenka; Wyatt, Gregory A. K.; Klein, Malin; Hink, Mark A.; Postma, Marten; Vaitla, Bapu; Noe, Ronald; Shimizu, Thomas S.; West, Stuart A.; Kierst, E. Toby

Long-term positioning and polar preference of chemoreceptor clusters in E. coli

NATURE COMMUNICATIONS

IF15.7

2018-10-25

OAAI

Koler, Moriah; Peretz, Eliran; Aditya, Chetan; Shimizu, Thomas S.; Vaknin, Ady

Phenotypic diversity and temporal variability in a bacterial signaling network revealed by single-cell FRET 单细胞FRET揭示的细菌信号网络中的表型多样性和时间变异性

ELIFE

IF0

2017-12-12

OAAI

Keegstra, Johannes M.; Kamino, Keita; Anquez, Francois; Lazova, Milena D.; Emonet, Thierry; Shimizu, Thomass