Ugo Bastolla - Publications, H-index & Citations

Ugo Bastolla

autonomous university of madrid

39H指数

142论文数

5.6K被引数

收录论文 38

发表时间

Site-Specific Structure and Stability Constrained Substitution Models Improve Phylogenetic Inference 位点特异性结构及稳定性约束的替换模型可提高系统发育推断的准确性。

SYSTEMATIC BIOLOGY

IF5.7

2025-11-01

OAAI

Lorca-Alonso, Ivan; Otero-de-Navascues, Fernando; Arenas, Miguel; Bastolla, Ugo

Fitness Effect of the Isoniazid Resistance Mutation S315T of the Catalase-Peroxidase Enzyme KatG of Mycobacterium tuberculosis Bastolla, U.; Rotkevich, M.; Arenas, M.; Arrayás, M.; Dogonadze, M.; Lavrova, A.; Molina-Sejas, J.; Tadesse, M.; Xulvi-Brunet, R.; Cox, J.A.G.; 等. 催化过氧化物酶KatG中异烟肼耐药突变S315T的适应性效应。Genome Biol. Evol. 2025, 17, evaf120. [Google Scholar] [CrossRef] [PubMed]

GENOME BIOLOGY AND EVOLUTION

IF2.8

2025-07-01

OAAI

Bastolla, Ugo; Rotkevich, Mikhail; Arenas, Miguel; Arrayas, Manuel; Dogonadze, Marine; Lavrova, Anastasia; Molina-Sejas, Jorge; Tadesse, Michael; Xulvi-Brunet, Ramon; Cox, Jonathan A. G.; Nerukh, Dmitry; Gonzalez-Benitez, Natalia; Stich, Michael

Cross-biome microbial networks reveal functional redundancy and suggest genome reduction through functional complementarity 跨生物组微生物网络揭示功能冗余，并建议通过功能互补性减少基因组

COMMUNICATIONS BIOLOGY

IF5.1

2024-08-24

OAAI

Puente-Sanchez, Fernando; Pascual-Garcia, Alberto; Bastolla, Ugo; Pedros-Alio, Carlos; Tamames, Javier

Diversity of immune responses in children highly exposed to SARS-CoV-2

FRONTIERS IN IMMUNOLOGY

IF5.9

2023-03-03

OAAI

Ubeda, Maria; Maza, Maria del Carmen; Delgado, Pilar; Horndler, Lydia; Abia, David; Garcia-Bermejo, Laura; Serrano-Villar, Sergio; Calvo, Cristina; Bastolla, Ugo; Sainz, Talia; Fresno, Manuel

Local Normal Mode Analysis for Fast Loop Conformational Sampling

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2022-09-13

OAAI

Ramon Lopez-Blanco, Jose; Dehouck, Yves; Bastolla, Ugo; Chacon, Pablo

ACE2 Serum Levels as Predictor of Infectability and Outcome in COVID-19

FRONTIERS IN IMMUNOLOGY

IF5.9

2022-03-23

OAAI

Maza, Maria del Carmen; Ubeda, Maria; Delgado, Pilar; Horndler, Lydia; Llamas, Miguel A.; van Santen, Hisse M.; Alarcon, Balbino; Abia, David; Garcia-Bermejo, Laura; Serrano-Villar, Sergio; Bastolla, Ugo; Fresno, Manuel

Why are large conformational changes well described by harmonic normal modes?

BIOPHYSICAL JOURNAL

IF3.1

2021-12-01

OAAI

Dehouck, Yves; Bastolla, Ugo

Mathematical Model of SARS-Cov-2 Propagation Versus ACE2 Fits COVID-19 Lethality Across Age and Sex and Predicts That of SARS

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2021-07-12

OAAI

Bastolla, Ugo

Structural basis for allosteric transitions of a multidomain pentameric ligand-gated ion channel

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2020-06-01

OAAI

Hu, Haidai; Howard, Rebecca J.; Bastolla, Ugo; Lindahl, Erik; Delarue, Marc

ProtASR2: Ancestral reconstruction of protein sequences accounting for folding stability ProtASR2: 负责折叠稳定性的蛋白质序列的祖先重建

METHODS IN ECOLOGY AND EVOLUTION

IF6.2

2020-01-23

OAAI

Arenas, Miguel; Bastolla, Ugo

Can Conformational Changes of Proteins Be Represented in Torsion Angle Space? A Study with Rescaled Ridge Regression

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2019-10-10

OAAI

Bastolla, Ugo; Dehouck, Yves

The Molecular Clock in the Evolution of Protein Structures

SYSTEMATIC BIOLOGY

IF5.7

2019-04-23

OAAI

Pascual-Garcia, Alberto; Arenas, Miguel; Bastolla, Ugo

Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication origins

GENOME RESEARCH

IF5.5

2019-03-07

OAAI

Sequeira-Mendes, Joana; Vergara, Zaida; Peiro, Ramon; Morata, Jordi; Araguez, Irene; Costas, Celina; Mendez-Giraldez, Raul; Casacuberta, Josep M.; Bastolla, Ugo; Gutierrez, Crisanto

Substitution Rates Predicted by Stability-Constrained Models of Protein Evolution Are Not Consistent with Empirical Data

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2017-12-26

OAAI

Jose Jimenez, Maria; Arenas, Miguel; Bastolla, Ugo

Molecular and Functional Bases of Selection against a Mutation Bias in an RNA Virus

GENOME BIOLOGY AND EVOLUTION

IF2.8

2017-05-01

OAAI

de la Higuera, Ignacio; Ferrer-Orta, Cristina; de Avila, Ana I.; Perales, Celia; Sierra, Macarena; Singh, Kamalendra; Sarafianos, Stefan G.; Dehouck, Yves; Bastolla, Ugo; Verdaguer, Nuria; Domingo, Esteban

Mutualism supports biodiversity when the direct competition is weak

NATURE COMMUNICATIONS

IF15.7

2017-02-24

OAAI

Pascual-Garcia, Alberto; Bastolla, Ugo

Editorial overview: Proteins: bridging theory and experiment

CURRENT OPINION IN STRUCTURAL BIOLOGY

IF7

2017-02-01

PREAI

Berezovsky, Igor N.; Bastolla, Ugo