Haoyu Chao - Publications, H-index & Citations

Haoyu Chao

zhejiang university

9H指数

50论文数

408被引数

收录论文 17

发表时间

Deep Learning for Deciphering the Plant Cis-Regulatory Code 深度学习解析植物顺式调控密码

Plants-Basel

IF4.1

2026-08-28

OAAI

Zhimeng Zhao; Sixuan Huang; Shilong Zhang; Chunfang Li; Haoyu Chao; Zixuan Wang; Xiaoying Zheng; Cong Feng; Ming Chen

Machine Learning-Guided Stress Atlases Reveal Co-Expression Rewiring and Divergent Cellular Deployment of Abiotic Stress Programs in Rice and Wheat 机器学习引导的压力图谱揭示水稻和小麦中非生物胁迫程序的共表达重排和细胞部署分歧

International Journal of Molecular Sciences

IF4.9

2026-08-05

OAAI

Zixuan Wang; Zhouxuan Ge; Haoyu Chao; Alibek Zatybekov; Qirong He; Xiaoying Zheng; Yue Wang; Shilong Zhang; Zhimeng Zhao; Renbo Yao; Vladimir A. Ivanisenko; Cong Feng; Ming Chen

T2T-Hub: a central platform for analyzing plant and animal telomere-to-telomere genomes T2T-Hub：一个用于分析植物和动物端粒到端粒基因组的核心平台

Nucleic Acids Research

IF13.1

2026-05-06

OAAI

Haoyu Chao; Zhonghao Ruan; Zhuojin Li; Xinkai Zhou; Shilong Zhang; Xingxing Shen; Cong Feng; Dijun Chen; Ming Chen; null

A Single-Cell Atlas of Pan-Cancer Liver Metastasis Reveals Dynamic Cellular Programs Driving Metastatic Progression and Immune Modulation 单细胞图谱揭示泛癌种肝脏转移中驱动转移进展和免疫调节的动态细胞程序

Research

IF10.7

2026-03-24

OAAI

Xinyu Tong; Haoyu Chao; Chenlu Zhang; Zhuojin Li; Quan Han; Lishan Wang; Nuo Wu; Ruidong Chen; Jian Gao; Shu Zhang; Lei Xu; Ming Chen; Hui Zhao; Lei Wang; Dijun Chen

Cross-species prediction of histone modifications in plants via deep learning 基于深度学习的植物组蛋白修饰跨物种预测

Genome Biology

IF9.4

2026-01-09

OAAI

Tongxuan Lv; Quan Han; Yilin Li; Chen Liang; Zhonghao Ruan; Haoyu Chao; Ming Chen; Dijun Chen

Genomic insights into drought adaptation of the forage shrub Caragana korshinskii (Fabaceae) widely planted in drylands

PLANT JOURNAL

IF5.7

2025-02-06

PREAI

Mei, Fengyuan; Yang, Tianrui; Chao, Haoyu; Ma, Xiaohui; Wu, Jingjing; Yang, Qi; Ren, Guangpeng; Song, Li; Wang, Qian; Qi, Liwang; Fu, Xinxing; Gao, Cuiping; Wang, Ruigang; Chen, Ming; Fang, Xiangwen; Liu, Jianquan; Li, Guojing; Wu, Shengdan

InTxDB: interaction data between gram-negative bacteria secreted effectors and host proteins InTxDB：革兰氏阴性菌分泌效应物与宿主蛋白之间的相互作用数据

Database

IF0

2025-01-18

OAAI

Yanyan Zhu; Liya Liu; Yueming Hu; Sida Li; Enyan Liu; Yanshi Hu; Shilong Zhang; Haoyu Chao; Qiuyu Fang; Huan Yu; Ming Chen

Genome-wide characterization of the sunflower kinome: classification, evolutionary analysis and expression patterns under different stresses

FRONTIERS IN PLANT SCIENCE

IF4.8

2024-12-02

OAAI

Yan, Ningning; Yang, Shuqing; Chao, Haoyu; Zhang, Wenbing; Zhang, Jian; Chen, Ming; Zhao, Jun

Non-coding RNA notations, regulations and interactive resources

FUNCTIONAL & INTEGRATIVE GENOMICS

IF3.1

2024-11-18

PREAI

Cheng, Mengwei; Zhu, Yinhuan; Yu, Han; Shao, Linlin; Zhang, Yiming; Li, Lanxing; Tu, Haohong; Xie, Luyao; Chao, Haoyu; Zhang, Peijing; Xin, Saige; Feng, Cong; Ivanisenko, Vladimir; Orlov, Yuriy; Chen, Dijun; Wong, Aloysius; Yang, Yixin Eric; Chen, Ming

ncPlantDB: a plant ncRNA database with potential ncPEP information and cell type-specific interaction

NUCLEIC ACIDS RESEARCH

IF13.1

2024-10-29

OAAI

Liu, Liya; Liu, Enyan; Hu, Yueming; Li, Sida; Zhang, Shilong; Chao, Haoyu; Hu, Yanshi; Zhu, Yanyan; Chen, Yifan; Xie, Luyao; Shen, Yi; Wu, Liangwei; Chen, Ming

Single-cell transcriptome analysis dissects lncRNA-associated gene networks in Arabidopsis 单细胞转录组分析剖析拟南芥中lncRNA相关基因网络

PLANT COMMUNICATIONS

IF11.6

2024-02-01

OAAI

He, Zhaohui; Lan, Yangming; Zhou, Xinkai; Yu, Bianjiong; Zhu, Tao; Yang, Fa; Fu, Liang-Yu; Chao, Haoyu; Wang, Jiahao; Feng, Rong-Xu; Zuo, Shimin; Lan, Wenzhi; Chen, Chunli; Chen, Ming; Zhao, Xue; Hu, Keming; Chen, Dijun

A chromosome-level genome assembly provides insights into Cornus wilsoniana evolution, oil biosynthesis, and floral bud development

HORTICULTURE RESEARCH

IF8.5

2023-09-29

OAAI

He, Zhenxiang; Chao, Haoyu; Zhou, Xinkai; Ni, Qingyang; Hu, Yueming; Yu, Ranran; Wang, Minghuai; Li, Changzhu; Chen, Jingzhen; Chen, Yunzhu; Chen, Yong; Cui, Chunyi; Zhang, Liangbo; Chen, Ming; Chen, Dijun

CropGF: a comprehensive visual platform for crop gene family mining and analysis

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

IF3.6

2023-07-01

OAAI

Xu, Jingtian; Zhu, Can; Su, Minzeng; Li, Sida; Chao, Haoyu; Chen, Ming

Early Identification of Crop Type for Smallholder Farming Systems Using Deep Learning on Time-Series Sentinel-2 Imagery

SENSORS

IF3.5

2023-02-05

OAAI

Khan, Haseeb Rehman; Gillani, Zeeshan; Jamal, Muhammad Hasan; Athar, Atifa; Chaudhry, Muhammad Tayyab; Chao, Haoyu; He, Yong; Chen, Ming