Alan E Murphy - Publications, H-index & Citations

Alan E Murphy

Cold Spring Harbor Laboratory

8H指数

47论文数

376被引数

收录论文 11

发表时间

Toward generalizable and interpretable AI in regulatory genomics 迈向可泛化和可解释的监管基因组学人工智能

Nature Genetics

IF29

2026-07-27

PREAI

Masayuki Nagai; Alan E. Murphy; Kaeli Rizzo; Peter K. Koo

Genome-wide meta-analysis of quantitatively measured generalized anxiety symptoms in individuals of European ancestry 欧洲血统个体中定量测量的广泛性焦虑症状的全基因组荟萃分析

Nature Human Behaviour

IF15.9

2026-06-09

OAAI

Megan Skelton; Brittany L. Mitchell; Elham Assary; Danyang Li; Genevieve Morneau-Vaillancourt; Alan E. Murphy; Abigail R. ter Kuile; Rujia Wang; Mark J. Adams; Enda M. Byrne; Elizabeth C. Corfield; Poppy Z. Grimes; Laurie J. Hannigan; Jihua Hu; Kadri Kõiv; Alex S. F. Kwong; Sergi Papiol; Johanne H. Pettersen; Giorgio Pistis; Enrique Castelao; Nora I. Strom; Peter J. van der Most; Ole A. Andreassen; Angelika Erhardt-Lehmann; Alexandra Havdahl; Nathan Skene; Brad Verhulst; Heike Weber; Chérie Armour; Helga Ask; William E. Copeland; Udo Dannlowski; Jürgen Deckert; Katharina Domschke; Ian B. Hickie; Kelli Lehto; Tina B. Lonsdorf; Ulrike Lueken; Michelle K. Lupton; Sarah E. Medland; Andrew M. McIntosh; Albertine J. Oldehinkel; Martin Preisig; Andreas Reif; Harold Snieder; James T. R. Walters; Naomi R. Wray; Catharina A. Hartman; Nicholas G. Martin; John M. Hettema; Gerome Breen; Jonathan R. I. Coleman; Thalia C. Eley

Predicting non-coding variant effects with AlphaGenome 使用AlphaGenome预测非编码变异的影响

Cell Research

IF25.9

2026-04-08

PREAI

Alan E. Murphy; Masayuki Nagai; Peter K. Koo

Enzyme Activity-Based Genome-wide Screening for Modifiers of Lysosomal Glucocerebrosidase Uncovers Candidate Risk Factors for Parkinson’s Disease 基于酶活性的全基因组筛选法用于鉴定溶酶体葡糖脑苷酶修饰因子，发现了帕金森病的候选风险因素

ACS Central Science

IF10.4

2025-09-03

OAAI

Vinod Udayar; Pierre-André Gilormini; Julien Bryois; Alexandra Gehrlein; Xi Chen; Stephanie Sonea; Sha Zhu; Matthew C. Deen; Nadia Anastasi; Alan E. Murphy; Nathan Skene; Manuela M. X. Tan; Jon-Anders Tunold; Filip Roudnicky; Wilma D. J. van de Berg; Lasse Pihlstrøm; David J. Vocadlo; Ravi Jagasia

Predicting gene expression from histone marks using chromatin deep learning models depends on histone mark function, regulatory distance and cellular states

NUCLEIC ACIDS RESEARCH

IF13.1

2024-12-11

OAAI

Murphy, Alan E.; Askarova, Aydan; Lenhard, Boris; Skene, Nathan G.; Marzi, Sarah J.

Predicting cell type-specific epigenomic profiles accounting for distal genetic effects 预测解释远端遗传效应的细胞类型特异性表观基因组图谱

NATURE COMMUNICATIONS

IF15.7

2024-11-16

PREAI

Murphy, Alan E.; Beardall, William; Rei, Marek; Phuycharoen, Mike; Skene, Nathan G.

rworkflows: automating reproducible practices for the R community

NATURE COMMUNICATIONS

IF15.7

2024-01-02

OAAI

Schilder, Brian M.; Murphy, Alan E.; Skene, Nathan G.

Avoiding false discoveries in single-cell RNA-seq by revisiting the first Alzheimer's disease dataset

ELIFE

IF0

2023-12-04

OAAI

Murphy, Alan E.; Fancy, Nurun; Skene, Nathan

A balanced measure shows superior performance of pseudobulk methods in single-cell RNA-sequencing analysis

NATURE COMMUNICATIONS

IF15.7

2022-12-22

OAAI

Murphy, Alan E.; Skene, Nathan G.

Multidimensional Dynamics of the Proteome in the Neurodegenerative and Aging Mammalian Brain

MOLECULAR & CELLULAR PROTEOMICS

IF5.5

2022-02-01

OAAI

Andrews, Byron; Murphy, Alan E.; Stofella, Michele; Maslen, Sarah; Almeida-Souza, Leonardo; Skehel, J. Mark; Skene, Nathan G.; Sobott, Frank; Frank, Rene A. W.

Genetics: A hope for prevention

EUROPEAN JOURNAL OF CANCER

IF7.1

1999-09-01

PREAI

Murphy, AE

研究方向