Dávid Jakubec - Publications, H-index & Citations

Dávid Jakubec

czech academy of sciences

11H指数

24论文数

529被引数

收录论文 12

发表时间

PrankWeb 3: accelerated ligand-binding site predictions for experimental and modelled protein structures

NUCLEIC ACIDS RESEARCH

IF13.1

2022-05-24

OAAI

Jakubec, David; Skoda, Petr; Krivak, Radoslav; Novotny, Marian; Hoksza, David

TLR8/TLR7 dysregulation due to a novel TLR8 mutation causes severe autoimmune hemolytic anemia and autoinflammation in identical twins

AMERICAN JOURNAL OF HEMATOLOGY

IF9.9

2022-01-28

PREAI

Fejtkova, Martina; Sukova, Martina; Hlozkova, Katerina; Kramarzova, Karolina Skvarova; Rackova, Marketa; Jakubec, David; Bakardjieva, Marina; Bloomfield, Marketa; Klocperk, Adam; Parackova, Zuzana; Sediva, Anna; Aluri, Jahnavi; Novakova, Michaela; Kalina, Tomas; Fronkova, Eva; Hrusak, Ondrej; Malcova, Hana; Sedlacek, Petr; Liba, Zuzana; Kudr, Martin; Stary, Jan; Cooper, Megan A.; Svaton, Michael; Kanderova, Veronika

EMC is required for biogenesis of Xport-A, an essential chaperone of Rhodopsin-1 and the TRP channel

EMBO REPORTS

IF6.2

2021-12-17

OAAI

Gaspar, Catarina J.; Vieira, Ligia C.; Santos, Cristiana C.; Christianson, John C.; Jakubec, David; Strisovsky, Kvido; Adrain, Colin; Domingos, Pedro M.

PDBe-KB: collaboratively defining the biological context of structural data Pdbe-kb: 协同定义结构数据的生物学背景

NUCLEIC ACIDS RESEARCH

IF13.1

2021-11-10

OAAI

Varadi, Mihaly; Anyango, Stephen; Armstrong, David; Berrisford, John; Choudhary, Preeti; Deshpande, Mandar; Nadzirin, Nurul; Nair, Sreenath S.; Pravda, Lukas; Tanweer, Ahsan; Al-Lazikani, Bissan; Andreini, Claudia; Barton, Geoffrey J.; Bednar, David; Berka, Karel; Blundell, Tom; Brock, Kelly P.; Maria Carazo, Jose; Damborsky, Jiri; David, Alessia; Dey, Sucharita; Dunbrack, Roland; Fernandez Recio, Juan; Fraternali, Franca; Gibson, Toby; Helmer-Citterich, Manuela; Hoksza, David; Hopf, Thomas; Jakubec, David; Kannan, Natarajan; Krivak, Radoslav; Kumar, Manjeet; Levy, Emmanuel D.; London, Nir; Macias, Jose Ramon; Srivatsan, Madhusudhan M.; Marks, Debora S.; Martens, Lennart; McGowan, Stuart A.; McGreig, Jake E.; Modi, Vivek; Gonzalo Parra, R.; Pepe, Gerardo; Piovesan, Damiano; Prilusky, Jaime; Putignano, Valeria; Radusky, Leandro G.; Ramasamy, Pathmanaban; Rausch, Atilio O.; Reuter, Nathalie; Rodriguez, Luis A.; Rollins, Nathan J.; Rosato, Antonio; Serrano, Luis; Singh, Gulzar; Skoda, Petr; Sorzano, Carlos Oscar S.; Stourac, Jan; Sulkowska, Joanna, I; Svobodova, Radka; Tichshenko, Natalia; Tosatto, Silvio C. E.; Vranken, Wim; Wass, Mark N.; Xue, Dandan; Zaidman, Daniel; Thornton, Janet; Sternberg, Michael; Orengo, Christine; Velankar, Sameer

Amino Acid Interactions (INTAA) web server v2.0: a single service for computation of energetics and conservation in biomolecular 3D structures

NUCLEIC ACIDS RESEARCH

IF13.1

2021-05-21

OAAI

Vymetal, Jiri; Jakubec, David; Galgonek, Jakub; Vondrasek, Jiri

Membrane Protein Dimerization in Cell-Derived Lipid Membranes Measured by FRET with MC Simulations

BIOPHYSICAL JOURNAL

IF3.1

2020-04-01

OAAI

Skerle, Jan; Humpolickova, Jana; Johnson, Nicholas; Rampirova, Petra; Polachova, Edita; Fliegl, Monika; Dohnalek, Jan; Suchankova, Anna; Jakubec, David; Strisovsky, Kvido

Efficient Estimation of Absolute Binding Free Energy for a Homeodomain-DNA Complex from Nonequilibrium Pulling Simulations

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2020-03-25

PREAI

Jakubec, David; Vondrasek, Jiri

Can All-Atom Molecular Dynamics Simulations Quantitatively Describe Homeodomain-DNA Binding Equilibria?

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2019-02-26

PREAI

Jakubec, David; Vondrasek, Jiri