Miguel Rocha - Publications, H-index & Citations

Miguel Rocha

university of minho

38H指数

461论文数

6.4K被引数

收录论文 55

发表时间

Decoding co-encapsulation of β-carotene and tocopherol in zein nanoparticles through orthogonal spectroscopy and machine learning 通过正交光谱和机器学习解码β-胡萝卜素和生育酚在玉米醇溶蛋白纳米颗粒中的共包封

Food Chemistry

IF9.8

2026-09-09

OAAI

Roman M. Fortunatus; Diogo Cachetas; Sandor Balog; Laura Rodriguez-Lorenzo; Miguel Rocha; Dimitri Vanhecke; Barbara Rothen-Rutishauser; Patricia Taladriz-Blanco; Alke Petri-Fink

Addressing SERS data scarcity for sulfonamide detection in water using a supervised VAE-WGAN framework 利用监督式VAE-WGAN框架解决水中磺胺类药物检测的SERS数据稀缺问题

Chemical Engineering Journal Advances

IF7.1

2026-04-18

OAAI

Diogo Cachetas; Ensieh Iranmehr; Ana Vieira; João Rodrigues; Miguel Rocha; Laura Rodriguez-Lorenzo

Leveraging Large Language Models on Assay Descriptions to Improve the Prediction of Inhibitors for Mycobacterium Tuberculosis 利用大型语言模型对检测描述进行分析以改进结核分枝杆菌抑制剂的预测

ADVANCES IN COMPUTATIONAL INTELLIGENCE, IWANN 2025, PT I

IF0

2026-01-01

PREAI

Alves, Nuno; Osorio, Nuno S.; Pereira, Vitor; Rocha, Miguel

Deepmol: an automated machine and deep learning framework for computational chemistry Deepmol: 计算化学的自动化机器和深度学习框架

JOURNAL OF CHEMINFORMATICS

IF5.7

2024-12-05

OAAI

Correia, Joao; Capela, Joao; Rocha, Miguel

A diel multi-tissue genome-scale metabolic model of Vitis vinifera

plos biology

IF3.6

2024-10-10

OAAI

Sampaio, Marta; Rocha, Miguel; Dias, Oscar

MOSCA 2.0: A bioinformatics framework for metagenomics, metatranscriptomics and metaproteomics data analysis and visualization

MOLECULAR ECOLOGY RESOURCES

IF5.5

2024-08-04

PREAI

Sequeira, Joao C.; Pereira, Vitor; Alves, M. Madalena; Pereira, M. Alcina; Rocha, Miguel; Salvador, Andreia F.

BioISO: An Objective-Oriented Application for Assisting the Curation of Genome-Scale Metabolic Models

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS

IF3.4

2024-03-01

OAAI

Cruz, Fernando; Capela, Joao; Ferreira, Eugenio Campos; Rocha, Miguel; Dias, Oscar

Reconstruction of cell-specific models capturing the influence of metabolism on DNA methylation in cancer

COMPUTERS IN BIOLOGY AND MEDICINE

IF6.3

2024-03-01

OAAI

Barata, Thnia; Pereira, Vitor; das Neves, Ricardo Pires; Rocha, Miguel

Conservation of Defensive Military Structures Built with Rammed Earth

BUILDINGS

IF3.1

2024-01-15

OAAI

Rocha, Miguel; Faria, Paulina; Gago, Antonio Sousa

The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber

plos biology

IF3.6

2023-09-20

OAAI

Cunha, Emanuel; Silva, Miguel; Chaves, Ines; Demirci, Huseyin; Lagoa, Davide Rafael; Lima, Diogo; Rocha, Miguel; Rocha, Isabel; Dias, Oscar

Recent advances in data- and knowledge-driven approaches to explore primary microbial metabolism

CURRENT OPINION IN CHEMICAL BIOLOGY

IF6.1

2023-08-01

OAAI

Bartmanski, Bartosz Jan; Rocha, Miguel; Zimmermann-Kogadeeva, Maria

A pipeline for the reconstruction and evaluation of context-specific human metabolic models at a large-scale

plos biology

IF3.6

2022-06-24

OAAI

Vieira, Vitor; Ferreira, Jorge; Rocha, Miguel

merlin, an improved framework for the reconstruction of high-quality genome-scale metabolic models

NUCLEIC ACIDS RESEARCH

IF13.1

2022-06-13

OAAI

Capela, Joao; Lagoa, Davide; Rodrigues, Ruben; Cunha, Emanuel; Cruz, Fernando; Barbosa, Ana; Bastos, Jose; Lima, Diogo; Ferreira, Eugenio C.; Rocha, Miguel; Dias, Oscar

ProPythia: A Python package for protein classification based on machine and deep learning ProPythia: 基于机器和深度学习的蛋白质分类Python包

NEUROCOMPUTING

IF6.5

2022-05-01

PREAI

Sequeira, Ana Marta; Lousa, Diana; Rocha, Miguel

Reconstruction of tissue-specific genome-scale metabolic models for human cancer stem cells

COMPUTERS IN BIOLOGY AND MEDICINE

IF6.3

2022-03-01

PREAI

Barata, Tania; Vieira, Vitor; Rodrigues, Ruben; das Neves, Ricardo Pires; Rocha, Miguel

Generative Deep Learning for Targeted Compound Design 面向目标化合物设计的生成式深度学习

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2021-10-26

PREAI

Sousa, Tiago; Correia, Joao; Pereira, Vitor; Rocha, Miguel

Model-guided development of an evolutionarily stable yeast chassis 模型指导的进化稳定酵母底盘的开发

MOLECULAR SYSTEMS BIOLOGY

IF7.7

2021-07-22

OAAI

Pereira, Filipa; Lopes, Helder; Maia, Paulo; Meyer, Britta; Nocon, Justyna; Jouhten, Paula; Konstantinidis, Dimitrios; Kafkia, Eleni; Rocha, Miguel; Koetter, Peter; Rocha, Isabel; Patil, Kiran R.

NMRFinder: a novel method for 1D 1H-NMR metabolite annotation

METABOLOMICS

IF3.3

2021-02-01

OAAI

Cardoso, Sara; Cabral, Debora; Maraschin, Marcelo; Rocha, Miguel

Causal integration of multi-omics data with prior knowledge to generate mechanistic hypotheses

MOLECULAR SYSTEMS BIOLOGY

IF7.7

2021-01-27

OAAI

Dugourd, Aurelien; Kuppe, Christoph; Sciacovelli, Marco; Gjerga, Enio; Gabor, Attila; Emdal, Kristina B.; Vieira, Vitor; Bekker-Jensen, Dorte B.; Kranz, Jennifer; Bindels, Eric. M. J.; Costa, Ana S. H.; Sousa, Abel; Beltrao, Pedro; Rocha, Miguel; Olsen, Jesper V.; Frezza, Christian; Kramann, Rafael; Saez-Rodriguez, Julio

A review of methods for the reconstruction and analysis of integrated genome-scale models of metabolism and regulation

BIOCHEMICAL SOCIETY TRANSACTIONS

IF4.3

2020-09-17

OAAI

Cruz, Fernando; Faria, Jose P.; Rocha, Miguel; Rocha, Isabel; Dias, Oscar

研究方向