Adrian H. Elcock - Publications, H-index & Citations

Adrian H. Elcock

University of Iowa

43H指数

136论文数

6.7K被引数

收录论文 57

发表时间

spotter: a single-nucleotide resolution stochastic simulation model of supercoiling-mediated transcription and translation in prokaryotes

NUCLEIC ACIDS RESEARCH

IF13.1

2023-08-21

OAAI

Hacker, William C.; Elcock, Adrian H.

Orientationally Averaged Version of the Rotne-Prager-Yamakawa Tensor Provides a Fast but Still Accurate Treatment of Hydrodynamic Interactions in Brownian Dynamics Simulations of Biological Macromolecules

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2023-07-06

OAAI

Tworek, John W. W.; Elcock, Adrian H. H.

p38α Mitogen-Activated Protein Kinase Is a Druggable Target in Pancreatic Adenocarcinoma

FRONTIERS IN ONCOLOGY

IF3.3

2019-11-26

OAAI

Yang, Ling; Sun, Xiaoting; Ye, Ying; Lu, Yongtian; Zuo, Ji; Liu, Wen; Elcock, Adrian; Zhu, Shun

Large-Scale Analysis of 48 DNA and 48 RNA Tetranucleotides Studied by 1 μs Explicit-Solvent Molecular Dynamics Simulations (vol 11, pg 5906, 2015)

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2018-11-14

OAAI

Schrodt, Michael V.; Andrews, Casey T.; Elcock, Adrian H.

Direct Comparison of Amino Acid and Salt Interactions with Double-Stranded and Single-Stranded DNA from Explicit Solvent Molecular Dynamics Simulations (vol 13, pg 1794, 2017)

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2018-11-14

OAAI

Andrews, Casey T.; Campbell, Brady A.; Elcock, Adrian H.

Stacking Free Energies of All DNA and RNA Nucleoside Pairs and Dinucleoside-Monophosphates Computed Using Recently Revised AMBER Parameters and Compared with Experiment (vol 11, pg 2315, 2015)

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2018-11-14

OAAI

Brown, Reid F.; Andrews, Casey T.; Elcock, Adrian H.

Cotranslational protein assembly imposes evolutionary constraints on homomeric proteins

NATURE STRUCTURAL & MOLECULAR BIOLOGY

IF10.1

2018-02-12

OAAI

Natan, Eviatar; Endoh, Tamaki; Haim-Vilmovsky, Liora; Flock, Tilman; Chalancon, Guilhem; Hopper, Jonathan T. S.; Kintses, Bilint; Horvath, Peter; Daruka, Lejla; Fekete, Gergely; Pal, Csaba; Papp, Balazs; Oszi, Erika; Magyar, Zoltan; Marsh, Joseph A.; Elcock, Adrian H.; Babu, M. Madan; Robinson, Carol V.; Sugimoto, Naoki; Teichmann, Sarah A.

The C-terminal region of translesion synthesis DNA polymerase η is partially unstructured and has high conformational flexibility

NUCLEIC ACIDS RESEARCH

IF13.1

2018-01-29

OAAI

Powers, Kyle T.; Elcock, Adrian H.; Washington, M. Todd

Features of genomic organization in a nucleotide-resolution molecular model of the Escherichia coli chromosome

NUCLEIC ACIDS RESEARCH

IF13.1

2017-06-22

OAAI

Hacker, William C.; Li, Shuxiang; Elcock, Adrian H.

Reparameterization of Solute-Solute Interactions for Amino Acid-Sugar Systems Using Isopiestic Osmotic Pressure Molecular Dynamics Simulations (vol 13, pg 1874, 2017)

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2017-05-10

OAAI

Lay, Wesley K.; Miller, Mark S.; Elcock, Adrian H.

Reparameterization of Solute-Solute Interactions for Amino Acid-Sugar Systems Using Isopiestic Osmotic Pressure Molecular Dynamics Simulations

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2017-04-28

OAAI

Lay, Wesley K.; Miller, Mark S.; Elcock, Adrian H.

Reparametrization of Protein Force Field Nonbonded Interactions Guided by Osmotic Coefficient Measurements from Molecular Dynamics Simulations

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2017-03-27

OAAI

Miller, Mark S.; Lay, Wesley K.; Li, Shuxiang; Hacker, William C.; An, Jiadi; Ren, Jianlan; Elcock, Adrian H.

Direct Comparison of Amino Acid and Salt Interactions with Double-Stranded and Single-Stranded DNA from Explicit-Solvent Molecular Dynamics Simulations

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2017-03-24

OAAI

Andrews, Casey T.; Campbell, Brady A.; Elcock, Adrian H.

Integrated In Vivo and In Silico Studies of Cotranslational Protein Folding as a Function of Translation Rate

BIOPHYSICAL JOURNAL

IF3.1

2017-02-01

OAAI

Walsh, Ian M.; Li, Shuxiang; Elcock, Adrian H.; Clark, Patricia L.

Molecular chaperones: providing a safe place to weather a midlife protein-folding crisis

NATURE STRUCTURAL & MOLECULAR BIOLOGY

IF10.1

2016-07-06

PREAI

Clark, Patricia L.; Elcock, Adrian H.

Dynamic binding of replication protein a is required for DNA repair

NUCLEIC ACIDS RESEARCH

IF13.1

2016-04-29

OAAI

Chen, Ran; Subramanyam, Shyamal; Elcock, Adrian H.; Spies, Maria; Wold, Marc S.

Optimizing Solute-Solute Interactions in the GLYCAM06 and CHARMM36 Carbohydrate Force Fields Using Osmotic Pressure Measurements

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2016-03-22

OAAI

Lay, Wesley K.; Miller, Mark S.; Elcock, Adrian H.

Large-Scale Analysis of 48 DNA and 48 RNA Tetranucleotides Studied by 1 μs Explicit-Solvent Molecular Dynamics Simulations

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2015-11-18

OAAI

Schrodt, Michael V.; Andrews, Casey T.; Elcock, Adrian H.

Dynamics and Energy Contributions for Transport of Unfolded Pertactin through a Protein Nanopore 通过蛋白质纳米孔运输未折叠的百达菌素的动力学和能量贡献

ACS NANO

IF16

2015-08-28

OAAI

Cressiot, Benjamin; Braselmann, Esther; Oukhaled, Abdelghani; Elcock, Adrian H.; Pelta, Juan; Clark, Patricia L.

Parametrization of Backbone Flexibility in a Coarse-Grained Force Field for Proteins (COFFDROP) Derived from All-Atom Explicit-Solvent Molecular Dynamics Simulations of All Possible Two-Residue Peptides

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2015-04-30

OAAI

Frembgen-Kesner, Tamara; Andrews, Casey T.; Li, Shuxiang; Nguyet Anh Ngo; Shubert, Scott A.; Jain, Aakash; Olayiwola, Oluwatoni J.; Weishaar, Mitch R.; Elcock, Adrian H.

研究方向