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D

David Bednář

Masaryk University

36H指数
214论文数
5.2K被引数
收录论文 67
发表时间
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FireProtASR 2.0: evolution-guided Design of Protein Ancestors and Successors with phylogenetics and machine learningFireProtASR 2.0：基于系统发育和机器学习的进化引导蛋白质祖先与后代设计
errBriefings in Bioinformatics
IF7.7
err2026-08-27
err0
errOAAI
errPavel Kohout; David Lacko; Milos Musil; Simeon Borko; Martin Stepanek; Jan Velecky; Petr Kabourek; Rayyan Tariq Khan; Monika Rosinska; Jiri Damborsky; Stanislav Mazurenko; David Bednar
err分享
err收藏
EnzymeMiner 2.0: advancing automated enzyme discovery with expansive sequence mining and smart property analysis酶挖掘2.0：通过扩展序列挖掘和智能属性分析推进自动化酶发现
errNucleic Acids Research
IF13.1
err2026-05-11
err0
errOAAI
errMonika Rosinska; Lucie Svobodova; Simeon Borko; David Lacko; Joan Planas-Iglesias; Sérgio M Marques; Petr Kabourek; Baoyan Liu; Karen Pailozian; Jiri Damborsky; Stanislav Mazurenko; David Bednar
err分享
err收藏
Mobilizing the Biocatalysis Community for Reproducible and Reusable Data Collection动员生物催化界进行可复制且可重用的数据收集
errACS Catalysis
IF13.1
err2026-05-05
err0
errOAAI
errSérgio M. Marques; Joan Planas-Iglesias; Jan Velecký; Milos Musil; Yasuhisa Asano; Tomasz Borowski; Vânia Brissos; Marco Cespugli; Koar Chorozian; Mohammad Dadashipour; Elif Erdem; Erica Elisa Ferrandi; Konstantinos Grigorakis; Anna Kluza; Janina Lawniczek; Konstantinos Makryniotis; Daniela Monti; Bettina Nestl; Anna C. Ngo; Efstratios Nikolaivits; Stefania Patti; Christina Pentari; Carolina F. Rodrigues; Tobias Schopper; Karolina Seweryn-Ożóg; Maciej Szaleniec; André Taborda; Mateusz Tataruch; Dirk Tischler; Evangelos Topakas; Jingyu Wang; Patrycja Wójcik; Agnieszka M. Wojtkiewicz; John M. Woodley; Olga Zastawny; Lígia O. Martins; Marco Fraaije; Jürgen Pleiss; Santiago Schnell; Jiri Damborsky; Stanislav Mazurenko; David Bednar
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Experimentally validated deep learning control of protein aggregation实验验证的蛋白质聚集深度学习控制
errCommunications Chemistry
IF6.2
err2026-04-28
err0
errOAAI
errVojtech Cima; Antonin Kunka; Joan Planas-Iglesias; Ekaterina Grakova; Martin Havlasek; Madhumalar Subramanian; Michal Beloch; Martin Marek; Katerina Slaninova; Jiri Damborsky; Zbynek Prokop; David Bednar; Jan Martinovic
err分享
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Structural insights into the evolution of alpha/beta-hydrolase fold luciferasesα/β-水解酶折叠荧光酶演化的结构见解
errInternational Journal of Biological Macromolecules
IF8.5
err2026-04-06
err0
PREAI
errMarika Majerova; Jana Horackova; Karolina Sedlackova; Marie Sulova; David Kovar; Jiri Damborsky; Zbynek Prokop; David Bednar; Martin Marek
err分享
err收藏
Molecular trick to reverse SN2 step in a haloalkane dehalogenase卤代烷脱卤酶中逆转SN2步骤的分子策略
errChem Catalysis
IF11.6
err2026-03-30
err0
PREAI
errMartin Toul; Sérgio M. Marques; Tadeja Gao; Hana Bernhardova; Ondrej Vavra; Veronika Novakova; Jiri Damborsky; David Bednar; Zbynek Prokop; Martin Marek
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err收藏
FireProtDB 2.0: large-scale manually curated database of the protein stability dataFireProtDB 2.0：大规模人工注释的蛋白质稳定性数据库
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-11-01
err0
errOAAI
errMusil, Milos; Borko, Simeon; Planas-Iglesias, Joan; Lacko, David; Rosinska, Monika; Kabourek, Petr; Martins, Ligia O.; Tataruch, Mateusz; Damborsky, Jiri; Mazurenko, Stanislav; Bednar, David
err分享
err收藏
Refining the AOP for Retinoid-Induced Teratogenicity: Insights into RAR/RXR Overactivation and RXR Cross-Talk with Retinoic Acid and Thyroid Hormone signaling精炼视黄酸诱导致畸性的AOP：关于RAR/RXR过度激活以及RXR与视黄酸和甲状腺激素信号通路交叉对话的见解
errAquatic Toxicology
IF4.3
err2025-10-15
err0
errOAAI
errAudrey Phan; Elise Pesce; Lisa Baumann; Petra Polakovičová; David Bedná; Marie Smutná; Jiří Novák; Klara Hilscherova
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Objective risk assessment of bark and ambrosia beetles non-indigenous to North America北美地区非本土树皮甲虫和蚍蜉甲虫的客观风险评估
errEcological Applications
IF4.3
err2025-07-09
err0
errOAAI
errAndrew J. Johnson; David Bednar; Jiri Hulcr
err分享
err收藏
Automated Engineering Protein Dynamics via Loop Grafting: Improving Renilla Luciferase Catalysis通过环移植自动化工程化蛋白质动力学：提高Renilla Luciferase催化作用
errACS CATALYSIS
IF13.1
err2025-02-11
err0
PREAI
errPlanas-Iglesias, J; Majerova, M; Pluskal, D; Vasina, M; Damborsky, J; Prokop, Z; Marek, M; Bednar, D
err分享
err收藏
Large-scale annotation of biochemically relevant pockets and tunnels in cognate enzyme-ligand complexes同源酶-配体复合物中生化相关口袋和隧道的大规模注释
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2024-10-15
err0
errOAAI
errVavra, O.; Tyzack, J.; Haddadi, F.; Stourac, J.; Damborsky, J.; Mazurenko, S.; Thornton, J. M.; Bednar, D.
err分享
err收藏
A computational workflow for analysis of missense mutations in precision oncology
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2024-07-29
err0
errOAAI
errKhan, Rayyan Tariq; Pokorna, Petra; Stourac, Jan; Borko, Simeon; Arefiev, Ihor; Planas-Iglesias, Joan; Dobias, Adam; Pinto, Gaspar; Szotkowska, Veronika; Sterba, Jaroslav; Slaby, Ondrej; Damborsky, Jiri; Mazurenko, Stanislav; Bednar, David
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Azobenzene-Based Photoswitchable Substrates for Advanced Mechanistic Studies of Model Haloalkane Dehalogenase Enzyme Family
errACS CATALYSIS
IF13.1
err2024-07-22
err0
errOAAI
errSlanska, Michaela; Stackova, Lenka; Marques, Sergio M.; Stacko, Peter; Martinek, Marek; Jilek, Lubos; Toul, Martin; Damborsky, Jiri; Bednar, David; Klan, Petr; Prokop, Zbynek
err分享
err收藏
CoVAMPnet: Comparative Markov State Analysis for Studying Effects of Drug Candidates on Disordered Biomolecules
errJACS AU
IF8.7
err2024-05-28
err3
errOAAI
errMarques, SergioM.; Kouba, Petr; Legrand, Anthony; Sedlar, Jiri; Disson, Lucas; Planas-Iglesias, Joan; Sanusi, Zainab; Kunka, Antonin; Damborsky, Jiri; Pajdla, Tomas; Prokop, Zbynek; Mazurenko, Stanislav; Sivic, Josef; Bednar, David
err分享
err收藏
AggreProt: a web server for predicting and engineering aggregation prone regions in proteins
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-05-27
err2
errOAAI
errPlanas-Iglesias, Joan; Borko, Simeon; Swiatkowski, Jan; Elias, Matej; Havlasek, Martin; Salamon, Ondrej; Grakova, Ekaterina; Kunka, Antonin; Martinovic, Tomas; Damborsky, Jiri; Martinovic, Jan; Bednar, David
err分享
err收藏
Exploring new galaxies: Perspectives on the discovery of novel PET-degrading enzymes
errAPPLIED CATALYSIS B-ENVIRONMENT AND ENERGY
IF21.1
err2024-03-01
err15
PREAI
errMican, Jan; Jaradat, Da 'san M. M.; Liu, Weidong; Weber, Gert; Mazurenko, Stanislav; Bornscheuer, Uwe T.; Damborsky, Jiri; Wei, Ren; Bednar, David
err分享
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FireProt 2.0: web-based platform for the fully automated design of thermostable proteins
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2023-11-28
err17
errOAAI
errMusil, Milos; Jezik, Andrej; Horackova, Jana; Borko, Simeon; Kabourek, Petr; Damborsky, Jiri; Bednar, David
err分享
err收藏
ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era
errNUCLEIC ACIDS RESEARCH
IF13.1
err2023-11-13
err3
errOAAI
errSpackova, Anna; Vavra, Ondrej; Racek, Tomas; Bazgier, Vaclav; Sehnal, David; Damborsky, Jiri; Svobodova, Radka; Bednar, David; Berka, Karel
err分享
err收藏
Advancing Enzyme's Stability and Catalytic Efficiency through Synergy of Force-Field Calculations, Evolutionary Analysis, and Machine Learning
errACS CATALYSIS
IF13.1
err2023-09-11
err18
errOAAI
errKunka, Antonin; Marques, Sergio M.; Havlasek, Martin; Vasina, Michal; Velatova, Nikola; Cengelova, Lucia; Kovar, David; Damborsky, Jiri; Marek, Martin; Bednar, David; Prokop, Zbynek
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Identification, characterization, and engineering of glycosylation in thrombolytics
errBIOTECHNOLOGY ADVANCES
IF12.5
err2023-09-01
err4
PREAI
errToul, Martin; Slonkova, Veronika; Mican, Jan; Urminsky, Adam; Tomkova, Maria; Sedlak, Erik; Bednar, David; Damborsky, Jiri; Hernychova, Lenka; Prokop, Zbynek
err分享
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研究方向

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合作学者
合作期刊
J
Janet M. Thornton
H 指数: 135 · 论文数: 784
T
Tom L. Blundell
H 指数: 112 · 论文数: 736
M
Michael J.E. Sternberg
H 指数: 100 · 论文数: 502
U
Uwe T. Bornscheuer
H 指数: 95 · 论文数: 891
T
Toby J. Gibson
H 指数: 85 · 论文数: 232
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