Pei-Chen Peng - Publications, H-index & Citations

Pei-Chen Peng

cedars sinai medical center

10H指数

44论文数

734被引数

收录论文 22

发表时间

Measuring the accuracy of electronic health record-based phenotyping in the All of Us Research Program to optimize statistical power for genetic association testing 基于电子健康记录的表型分析在“我们所有人”研究计划中的准确性测量，以优化遗传关联测试的统计功效

Journal of the American Medical Informatics Association

IF4.6

2026-01-01

PREAI

Baierl, John; Hsiao, Yi-Wen; Jones, Michelle R.; Peng, Pei-Chen; Pharoah, Paul D. P.

Benchmarking large language models for identifying transcription factor regulatory interactions 评估大型语言模型在识别转录因子调控相互作用方面的性能

Bioinformatics

IF5.4

2026-01-01

OAAI

Noel, Lake; Hsiao, Yi-Wen; He, Yimeng; Hung, Andrew; Cui, Xiaojiang; Ray, Edward; Moore, Jason H.; Peng, Pei-Chen; Huang, Xiuzhen

S4-Multi: enhancing polygenic score prediction in ancestrally diverse populations S4-Multi：增强祖先多样人群的多基因分数预测

Human Genetics and Genomics Advances

IF3.6

2025-11-27

OAAI

John Baierl; Jonathan P. Tyrer; Ping-Hung Lai; Simon A. Gayther; Yi-Wen Hsiao; Michelle Jones; Paul D.P. Pharoah; Pei-Chen Peng

Genome-wide association study of 398,238 women unveils seven loci associated with high-grade serous ovarian cancer 398,238名女性的全基因组关联研究揭示了七个与高级别浆液性卵巢癌相关的位点

npj Genomic Medicine

IF4.8

2025-11-20

OAAI

Daniel R. Barnes; Jonathan P. Tyrer; Joe Dennis; Goska Leslie; Manjeet K. Bolla; Michael Lush; Amber M. Aeilts; Kristiina Aittomäki; Nadine Andrieu; Irene L. Andrulis; Hoda Anton-Culver; Adalgeir Arason; Banu K. Arun; Judith Balmaña; Elisa V. Bandera; Rosa B. Barkardottir; Lieke P. V. Berger; Amy Berrington de Gonzalez; Pascaline Berthet; Katarzyna Białkowska; Line Bjørge; Amie M. Blanco; Marinus J. Blok; Kristie A. Bobolis; Natalia V. Bogdanova; James D. Brenton; Henriett Butz; Saundra S. Buys; Maria A. Caligo; Ian Campbell; Carmen Castillo; Kathleen B. M. Claes; Sarah V. Colonna; Linda S. Cook; Mary B. Daly; Agnieszka Dansonka-Mieszkowska; Miguel de la Hoya; Anna deFazio; Allison DePersia; Yuan Chun Ding; Jennifer A. Doherty; Susan M. Domchek; Thilo Dörk; Zakaria Einbeigi; Christoph Engel; D. Gareth Evans; Lenka Foretova; Renée T. Fortner; Florentia Fostira; Maria Cristina Foti; Eitan Friedman; Megan N. Frone; Patricia A. Ganz; Aleksandra Gentry-Maharaj; Gord Glendon; Andrew K. Godwin; Anna González-Neira; Mark H. Greene; Jacek Gronwald; Aliana Guerrieri-Gonzaga; Ute Hamann; Thomas V. O. Hansen; Holly R. Harris; Jan Hauke; Florian Heitz; Frans B. L. Hogervorst; Maartje J. Hooning; John L. Hopper; Chad D. Huff; David G. Huntsman; Evgeny N. Imyanitov; Louise Izatt; Anna Jakubowska; Paul A. James; Ramunas Janavicius; Esther M. John; Siddhartha Kar; Beth Y. Karlan; Catherine J. Kennedy; Lambertus A.L.M. Kiemeney; Irene Konstantopoulou; Jolanta Kupryjanczyk; Yael Laitman; Ofer Lavie; Kate Lawrenson; Jenny Lester; Fabienne Lesueur; Carlos Lopez-Pleguezuelos; Phuong L. Mai; Siranoush Manoukian; Taymaa May; Iain A. McNeish; Usha Menon; Roger L. Milne; Francesmary Modugno; Jennifer M. Mongiovi; Marco Montagna; Kirsten B. Moysich; Susan L. Neuhausen; Finn C. Nielsen; Catherine Noguès; Edit Oláh; Olufunmilayo I. Olopade; Ana Osorio; Laura Papi; Harsh Pathak; Celeste L. Pearce; Inge S. Pedersen; Ana Peixoto; Tanja Pejovic; Pei-Chen Peng; Beth N. Peshkin; Paolo Peterlongo; C. Bethan Powell; Darya Prokofyeva; Miquel Angel Pujana; Paolo Radice; Muhammad U. Rashid; Gad Rennert; George Richenberg; Dale P. Sandler; Naoko Sasamoto; Veronica W. Setiawan; Priyanka Sharma; Weiva Sieh; Christian F. Singer; Katie Snape; Anna P. Sokolenko; Penny Soucy; Melissa C. Southey; Dominique Stoppa-Lyonnet; Rebecca Sutphen; Christian Sutter; Yen Y. Tan; Manuel R. Teixeira; Kathryn L. Terry; Liv Cecilie V. Thomsen; Marc Tischkowitz; Amanda E. Toland; Toon Van Gorp; Ana Vega; Digna R. Velez Edwards; Penelope M. Webb; Jeffrey N. Weitzel; Nicolas Wentzensen; Alice S. Whittemore; Stacey J. Winham; Anna H. Wu; Siddhartha Yadav; Yao Yu; Argyrios Ziogas; Andrew Berchuck; Fergus J. Couch; Ellen L. Goode; Marc T. Goodman; Alvaro N. Monteiro; Kenneth Offit; Susan J. Ramus; Harvey A. Risch; Joellen M. Schildkraut; Mads Thomassen; Jacques Simard; Douglas F. Easton; Michelle R. Jones; Georgia Chenevix-Trench; Simon A. Gayther; Antonis C. Antoniou; Paul D. P. Pharoah

PREDICT breast v4.0: an update to the PREDICT breast prognostic model PREDICT breast v4.0：PREDICT breast预后模型的更新

BMC RESEARCH NOTES

IF1.7

2025-11-14

OAAI

Pharoah, Paul D. P.; Hsiao, Yi-Wen; Wishart, Gordon C.; Peng, Pei-Chen

Characterizing somatic mutations in ovarian cancer germline risk regions 表征卵巢癌生殖系风险区域的体细胞突变

COMMUNICATIONS BIOLOGY

IF5.1

2025-04-29

OAAI

Lai, Ping-Hung; Tyrer, Jonathan P.; Pharoah, Paul; Gayther, Simon A.; Jones, Michelle R.; Peng, Pei-Chen

Exome sequencing identifies HELB as a novel susceptibility gene for non-mucinous, non-high-grade-serous epithelial ovarian cancer

EUROPEAN JOURNAL OF HUMAN GENETICS

IF4.6

2025-02-12

OAAI

Dicks, Ed M.; Tyrer, Jonthan P.; Ezquina, Suzana; Jones, Michelle; Baierl, John; Peng, Pei-Chen; Diaz, Michael; Goode, Ellen; Winham, Stacey J.; Doerk, Thilo; Gorp, Toon Van; Fazio, Anna; Bowtell, David D. L.; Garsed, Dale W.; Odunsi, Kunle; Moysich, Kirsten; Pavanello, Marina; Fostira, Florentia; Webb, Penelope M.; Soukupova, Jana; Cohen, Paul A.; Sieh, Weiva; Fortner, Renee Turzanski; Ricker, Charite; Karlan, Beth; Campbell, Ian; Brenton, James D.; Ramus, Susan J.; Gayther, Simon A.; Pharoah, Paul D. P.

Validation of the PREDICT breast version 3.0 prognostic tool in the US breast cancer patients

CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

IF3.4

2024-09-21

PREAI

Hsiao, Yi-Wen; Pharaoh, Paul; Peng, Pei-Chen

Improving on polygenic scores across complex traits using select and shrink with summary statistics (S4) and LDpred2 使用select and shrink与摘要统计 (S4) 和LDpred2提高复杂性状的多基因得分

BMC GENOMICS

IF3.7

2024-09-18

OAAI

Tyrer, Jonathan P.; Peng, Pei-Chen; Devries, Amber A.; Gayther, Simon A.; Jones, Michelle R.; Pharoah, Paul D.

Rare germline genetic variation in PAX8 transcription factor binding sites and susceptibility to epithelial ovarian cancer PAX8转录因子结合位点罕见种系遗传变异与上皮性卵巢癌易感性

AMERICAN JOURNAL OF EPIDEMIOLOGY

IF4.8

2024-08-27

OAAI

Ezquina, Suzana A. M.; Jones, Michelle; Dicks, Ed; de Vries, Amber; Peng, Pei-Chen; Lawrenson, Kate; Corona, Rosario, I; Tyrer, Jonathan; Hazelett, Dennis; Brenton, James; Antoniou, Antonis; Gayther, Simon A.; Pharoah, Paul D. P.

Advancing LGBTQ+ inclusion in STEM education and AI research 推进STEM教育和AI研究中的LGBTQ包容

PATTERNS

IF7.4

2024-06-01

OAAI

Wong, Emily; Urbanowicz, Ryan J.; Bright, Tiffani J.; Tatonetti, Nicholas P.; Hsiao, Yi-Wen; Huang, Xiuzhen; Moore, Jason H.; Peng, Pei -Chen

Integrative multi-omics analyses to identify the genetic and functional mechanisms underlying ovarian cancer risk regions 整合多组学分析以确定卵巢癌风险区域的遗传和功能机制

AMERICAN JOURNAL OF HUMAN GENETICS

IF8.1

2024-06-01

PREAI

Dareng, Eileen O.; Coetzee, Simon G.; Tyrer, Jonathan P.; Peng, Pei-Chen; Rosenow, Will; Chen, Stephanie; Davis, Brian D.; Dezem, Felipe Segato; Seo, Ji-Heui; Nameki, Robbin; Reyes, Alberto L.; Aben, Katja K. H.; Anton-Culver, Hoda; Antonenkova, Natalia N.; Aravantinos, Gerasimos; Bandera, Elisa V.; Freeman, Laura E. Beane; Beckmann, Matthias W.; Beeghly-Fadiel, Alicia; Benitez, Javier; Bernardini, Marcus Q.; Bjorge, Line; Black, Amanda; Bogdanova, Natalia V.; Bolton, Kelly L.; Brenton, James D.; Budzilowska, Agnieszka; Butzow, Ralf; Cai, Hui; Campbell, Ian; Cannioto, Rikki; Chang-Claude, Jenny; Chanock, Stephen J.; Chen, Kexin; Chenevix-Trench, Georgia; Chiew, Yoke-Eng; Cook, Linda S.; DeFazio, Anna; Dennis, Joe; Doherty, Jennifer A.; Doerk, Thilo; du Bois, Andreas; Duerst, Matthias; Eccles, Diana M.; Ene, Gabrielle; Fasching, Peter A.; Flanagan, James M.; Fortner, Renee T.; Fostira, Florentia; Gentry-Maharaj, Aleksandra; Giles, Graham G.; Goodman, Marc T.; Gronwald, Jacek; Haiman, Christopher A.; Hakansson, Niclas; Heitz, Florian; Hildebrandt, Michelle A. T.; Hogdall, Estrid; Hogdall, Claus K.; Huang, Ruea-Yea; Jensen, Allan; Jones, Michael E.; Kang, Daehee; Karlan, Beth Y.; Karnezis, Anthony N.; Kelemen, Linda E.; Kennedy, Catherine J.; Khusnutdinova, Elza K.; Kiemeney, Lambertus A.; Kjaer, Susanne K.; Kupryjanczyk, Jolanta; Labrie, Marilyne; Lambrechts, Diether; Larson, Melissa C.; Le, Nhu D.; Lester, Jenny; Li, Lian; Lubinski, Jan; Lush, Michael; Marks, Jeffrey R.; Matsuo, Keitaro; May, Taymaa; McLaughlin, John R.; McNeish, Iain A.; Menon, Usha; Missmer, Stacey; Modugno, Francesmary; Moffitt, Melissa; Monteiro, Alvaro N.; Moysich, Kirsten B.; Narod, Steven A.; Nguyen-Dumont, Tu; Odunsi, Kunle; Olsson, Hakan; Onland-Moret, N. Charlotte; Park, Sue K.; Pejovic, Tanja; Permuth, Jennifer B.; Piskorz, Anna; Prokofyeva, Darya; Riggan, Marjorie J.; Risch, Harvey A.; Rodriguez-Antona, Cristina; Rossing, Mary Anne; Sandler, Dale P.; Setiawan, V. Wendy; Shan, Kang; Song, Honglin; Southey, Melissa C.; Steed, Helen; Sutphen, Rebecca; Swerdlow, Anthony J.; Teo, Soo Hwang; Terry, Kathryn L.; Thompson, Pamela J.; Thomsen, Liv Cecilie Vestrheim; Titus, Linda; Trabert, Britton; Travis, Ruth; Tworoger, Shelley S.; Valen, Ellen; Van Nieuwenhuysen, Els; Edwards, Digna Velez; Vierkant, Robert A.; Webb, Penelope M.; Weinberg, Clarice R.; Weise, Rayna Matsuno; Wentzensen, Nicolas; White, Emily; Winham, Stacey J.; Wolk, Alicja; Woo, Yin-Ling; Wu, Anna H.; Yan, Li; Yannoukakos, Drakoulis; Zeinomar, Nur; Zheng, Wei; Ziogas, Argyrios; Berchuck, Andrew; Goode, Ellen L.; Huntsman, David G.; Pearce, Celeste L.; Ramus, Susan J.; Sellers, Thomas A.; Freedman, Matthew L.; Lawrenson, Kate; Schildkraut, Joellen M.; Hazelett, Dennis; Plummer, Jasmine T.; Kar, Siddhartha; Jones, Michelle R.; Pharoah, Paul D. P.; Gayther, Simon A.

Homologous recombination repair deficiency, and not recurrence, determines mutational burden and clonal dynamics in high grade serous ovarian cancer

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Diaz, Michael A.; Gull, Nicole; Peng, Pei-Chen; Lawrenson, Kate; Rimel, Bobbie J.; Lester, Jenny; Karlan, Beth; Gayther, Simon A.; Jones, Michelle R.

ChatGPT and large language models in academia: opportunities and challenges ChatGPT和学术界的大型语言模型: 机遇与挑战

BIODATA MINING

IF6.1

2023-07-13

175

OAAI

Meyer, Jesse G.; Urbanowicz, Ryan J.; Martin, Patrick C. N.; O'Connor, Karen; Li, Ruowang; Peng, Pei-Chen; Bright, Tiffani J.; Tatonetti, Nicholas; Won, Kyoung Jae; Gonzalez-Hernandez, Graciela; Moore, Jason H.

Copy Number Variants Are Ovarian Cancer Risk Alleles at Known and Novel Risk Loci 拷贝数变异是已知和新的风险位点的卵巢癌风险等位基因

JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE

IF7.2

2022-10-10

OAAI

DeVries, Amber A.; Dennis, Joe; Tyrer, Jonathan P.; Peng, Pei-Chen; Coetzee, Simon G.; Reyes, Alberto L.; Plummer, Jasmine T.; Davis, Brian D.; Chen, Stephanie S.; Dezem, Felipe Segato; Aben, Katja K. H.; Anton-Culver, Hoda; Antonenkova, Natalia N.; Beckmann, Matthias W.; Beeghly-Fadiel, Alicia; Berchuck, Andrew; Bogdanova, Natalia, V; Bogdanova-Markov, Nadja; Brenton, James D.; Butzow, Ralf; Campbell, Ian; Chang-Claude, Jenny; Chenevix-Trench, Georgia; Cook, Linda S.; DeFazio, Anna; Doherty, Jennifer A.; Dork, Thilo; Eccles, Diana M.; Eliassen, A. Heather; Fasching, Peter A.; Fortner, Renee T.; Giles, Graham G.; Goode, Ellen L.; Goodman, Marc T.; Gronwald, Jacek; Hakansson, Niclas; Hildebrandt, Michelle A. T.; Huff, Chad; Huntsman, David G.; Jensen, Allan; Kar, Siddhartha; Karlan, Beth Y.; Khusnutdinova, Elza K.; Kiemeney, Lambertus A.; Kjaer, Susanne K.; Kupryjanczyk, Jolanta; Labrie, Marilyne; Lambrechts, Diether; Le, Nhu D.; Lubinski, Jan; May, Taymaa; Menon, Usha; Milne, Roger L.; Modugno, Francesmary; Monteiro, Alvaro N.; Moysich, Kirsten B.; Odunsi, Kunle; Olsson, Hakan; Pearce, Celeste L.; Pejovic, Tanja; Ramus, Susan J.; Riboli, Elio; Riggan, Marjorie J.; Romieu, Isabelle; Sandler, Dale P.; Schildkraut, Joellen M.; Setiawan, V. Wendy; Sieh, Weiva; Song, Honglin; Sutphen, Rebecca; Terry, Kathryn L.; Thompson, Pamela J.; Titus, Linda; Tworoger, Shelley S.; Van Nieuwenhuysen, Els; Edwards, Digna Velez; Webb, Penelope M.; Wentzensen, Nicolas; Whittemore, Alice S.; Wolk, Alicja; Wu, Anna H.; Ziogas, Argyrios; Freedman, Matthew L.; Lawrenson, Kate; Pharoah, Paul D. P.; Easton, Douglas F.; Gayther, Simon A.; Jones, Michelle R.

DNA methylation and transcriptomic features are preserved throughout disease recurrence and chemoresistance in high grade serous ovarian cancers 在高级别浆液性卵巢癌中，DNA甲基化和转录组学特征在疾病复发和化疗耐药过程中得以保留

JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH

IF12.8

2022-07-27

OAAI

Gull, Nicole; Jones, Michelle R.; Peng, Pei-Chen; Coetzee, Simon G.; Silva, Tiago C.; Plummer, Jasmine T.; Reyes, Alberto Luiz P.; Davis, Brian D.; Chen, Stephanie S.; Lawrenson, Kate; Lester, Jenny; Walsh, Christine; Rimel, Bobbie J.; Li, Andrew J.; Cass, Ilana; Berg, Yonatan; Govindavari, John-Paul B.; Rutgers, Joanna K. L.; Berman, Benjamin P.; Karlan, Beth Y.; Gayther, Simon A.

Ovarian Cancer Risk Variants Are Enriched in Histotype-Specific Enhancers and Disrupt Transcription Factor Binding Sites

AMERICAN JOURNAL OF HUMAN GENETICS

IF8.1

2020-10-01

OAAI

Jones, Michelle R.; Peng, Pei-Chen; Coetzee, Simon G.; Tyrer, Jonathan; Reyes, Alberto Luiz P.; Corona, Rosario, I; Davis, Brian; Chen, Stephanie; Dezem, Felipe; Seo, Ji-Heui; Kar, Siddartha; Dareng, Eileen; Berman, Benjamin P.; Freedman, Matthew L.; Plummer, Jasmine T.; Lawrenson, Kate; Pharoah, Paul; Hazelett, Dennis J.; Gayther, Simon A.

The Role of Chromatin Accessibility in cis-Regulatory Evolution 染色质可及性在顺式调控进化中的作用

GENOME BIOLOGY AND EVOLUTION

IF2.8

2019-05-22

OAAI

Peng, Pei-Chen; Khoueiry, Pierre; Girardot, Charles; Reddington, James P.; Garfield, David A.; Furlong, Eileen E. M.; Sinha, Saurabh

Uncoupling evolutionary changes in DNA sequence, transcription factor occupancy and enhancer activity

ELIFE

IF0

2017-08-09

OAAI

Khoueiry, Pierre; Girardot, Charles; Ciglar, Lucia; Peng, Pei-Chen; Gustafson, E. Hilary; Sinha, Saurabh; Furlong, Eileen E. M.