José C. M. Mombach - Publications, H-index & Citations

José C. M. Mombach

Universidade Federal de Santa Maria

24H指数

97论文数

1.6K被引数

收录论文 25

发表时间

MYC–SNHG7–miR-34a-5p Feedback Loop Orchestrates GSDMD-Dependent Pyroptosis in Hepatocellular Carcinoma MYC–SNHG7–miR-34a-5p反馈环路调控肝细胞癌中GSDMD依赖的焦亡

International Journal of Molecular Sciences

IF4.9

2026-09-23

OAAI

Houemakou Rimaud Djidonou; Laís de Carvalho Gonçalves; Djorkaeff O. Fontinele; Daner A. Silveira; Marialva Sinigaglia; Joao Paulo M. S. Lima; José Carlos M. Mombach; Shantanu Gupta

Systems biology approach reveals the dynamics of cancer stem cell acquisition in ewing sarcoma: the role of let-7 and miR-145 regulatory circuits 系统生物学方法揭示了ewing肉瘤中癌干细胞获取的动态过程：let-7和miR-145调控回路的作用

Network Modeling Analysis in Health Informatics and Bioinformatics

IF0

2026-02-17

PREAI

Silveira, Daner A.; Gupta, Shantanu; Brunetto, Andre T.; Mombach, Jose Carlos Merino; Sinigaglia, Marialva

DNA Damage-Induced Ferroptosis: A Boolean Model Regulating p53 and Non-Coding RNAs in Drug Resistance DNA损伤诱导的铁死亡：调控p53和非编码RNA耐药性的布尔模型

Proteomes 2025, Vol. 13, Page 6

IF3.6

2025-08-22

PREAI

Shantanu Gupta; Daner A. Silveira; José Carlos M. Mombach; Ronaldo F. Hashimoto

Targeting NSCLC drug resistance: Systems biology insights into the MALAT1/miR-145-5p axis and Wip1 in regulating ferroptosis and apoptosis 靶向NSCLC药物耐药性：系统生物学对MALAT1/miR-145-5p轴及Wip1在调控铁死亡和凋亡中的见解

JOURNAL OF THE ROYAL SOCIETY INTERFACE

IF3.5

2025-05-28

PREAI

Gupta, Shantanu; Silveira, Daner Acunha; Mombach, Jose Carlos; Hashimoto, Ronaldo F.

DNA Damage-Induced Ferroptosis: A Boolean Model Regulating p53 and Non-Coding RNAs in Drug Resistance

PROTEOMES

IF3.6

2025-01-20

OAAI

Gupta, Shantanu; Silveira, Daner A.; Mombach, Jose Carlos M.; Hashimoto, Ronaldo F.

Hypoxia-driven hybrid phenotypes in Ewing sarcoma: Insights from computational epithelial-mesenchymal transition modeling

nature computational science

IF3.7

2024-12-01

PREAI

Silveira, Daner A.; Gupta, Shantanu; Brunetto, Andre T.; Mombach, Jose Carlos Merino; Sinigaglia, Marialva

A differentiable programming framework for spin models

COMPUTER PHYSICS COMMUNICATIONS

IF3.4

2024-09-01

PREAI

Farias, Tiago S.; Schultz, Vitor V.; Mombach, Jose C. M.; Maziero, Jonas

A dynamic Boolean network reveals that the BMI1 and MALAT1 axis is associated with drug resistance by limiting miR-145-5p in non-small cell lung cancer 动态布尔网络揭示非小细胞肺癌中BMI1和MALAT1轴通过限制miR-145-5p与耐药性相关

NON-CODING RNA RESEARCH

IF4.7

2024-03-01

OAAI

Gupta, Shantanu; Silveira, Daner A.; Piedade, Gabriel P. S.; Ostrowski, Miguel P.; Mombach, Jose Carlos M.; Hashimoto, Ronaldo F.

The lncRNA DLX6-AS1/miR-16-5p axis regulates autophagy and apoptosis in non-small cell lung cancer: A Boolean model of cell death

NON-CODING RNA RESEARCH

IF4.7

2023-12-01

OAAI

Gupta, Shantanu; Silveira, Daner A.; Mombach, Jose Carlos M.; Hashimoto, Ronaldo F.

A logical model of Ewing sarcoma cell epithelial-to-mesenchymal transition supports the existence of hybrid cellular phenotypes

FEBS LETTERS

IF3

2023-08-28

OAAI

Silveira, Daner A.; Gupta, Shantanu; Jaeger, Mariane da Cunha; de Farias, Caroline Brunetto; Mombach, Jose Carlos Merino; Sinigaglia, Marialva

A Boolean Model of the Proliferative Role of the lncRNA XIST in Non-Small Cell Lung Cancer Cells

BIOLOGY-BASEL

IF3.5

2022-03-22

OAAI

Gupta, Shantanu; Silveira, Daner A.; Hashimoto, Ronaldo E.; Mombach, Jose Carlos M.

Towards DNA-damage induced autophagy: A Boolean model of p53-induced cell fate mechanisms

DNA REPAIR

IF2.7

2020-12-01

PREAI

Gupta, Shantanu; Silveira, Daner A.; Mombach, Jose Carlos M.

Systems biology approach suggests new miRNAs as phenotypic stability factors in the epithelial-mesenchymal transition

JOURNAL OF THE ROYAL SOCIETY INTERFACE

IF3.5

2020-10-14

OAAI

Silveira, Daner A.; Gupta, Shantanu; Mombach, Jose Carlos M.

Integrative data modeling from lung and lymphatic cancer predicts functional roles for miR-34a and miR-16 in cell fate regulation

SCIENTIFIC REPORTS

IF3.9

2020-02-13

OAAI

Gupta, Shantanu; Silveira, Daner A.; Barbe-Tuana, Florencia M.; Mombach, Jose Carlos M.

ATM/miR-34a-5p axis regulates a p21-dependent senescence-apoptosis switch in non-small cell lung cancer: a Boolean model of G1/S checkpoint regulation

FEBS LETTERS

IF3

2019-10-10

OAAI

Gupta, Shantanu; Silveira, Daner A.; Mombach, Jose Carlos M.

Dynamics of the feedback loops required for the phenotypic stabilization in the epithelial-mesenchymal transition

FEBS JOURNAL

IF4.2

2019-10-01

OAAI

Silveira, Daner A.; Mombach, Jose Carlos M.

Towards the contribution of the p38MAPK pathway to the dual role of TGFβ in cancer: A boolean model approach

COMPUTERS IN BIOLOGY AND MEDICINE

IF6.3

2019-01-01

OAAI

Rossato, Veronica V.; Silveira, Daner A.; Gupta, Shantanu; Mombach, Jose Carlos M.

Network integration of multi-tumour omics data suggests novel targeting strategies

NATURE COMMUNICATIONS

IF15.7

2018-10-30

OAAI

do Valle, Italo Faria; Menichetti, Giulia; Simonetti, Giorgia; Bruno, Samantha; Zironi, Isabella; Durso, Danielle Fernandes; Mombach, Jose C. M.; Martinelli, Giovanni; Castellani, Gastone; Remondini, Daniel

The R implementation of the CRAN package PATHChange, a tool to study genetic pathway alterations in transcriptomic data

COMPUTERS IN BIOLOGY AND MEDICINE

IF6.3

2016-11-01

OAAI

Fontoura, Carla A. R. S.; Castellani, Gastone; Mombach, Jose C. M.

A Simplified Model for Intermittent Turbulence in the Nocturnal Boundary Layer

advances in atmospheric sciences

IF2.8

2011-08-01

OAAI

Costa, Felipe D.; Acevedo, Otavio C.; Mombach, Jose C. M.; Degrazia, Gervasio A.

研究方向