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Ali Masoudi‐Nejad

department of bioinformatics

39H指数
234论文数
5.2K被引数
收录论文 74
发表时间
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SynergyGraph: predicting cell line specific drug combination synergy scores using knowledge graph representation and hypergraph modelingSynergyGraph：利用知识图谱表示和超图建模预测细胞系特异性的药物组合协同评分
errScientific Reports
IF3.9
err2025-12-24
err0
errOAAI
errMaryam Mehrabani; Amir Lakizadeh; Alireza Fotuhi Siahpirani; Mahdieh Salimi; Fatemeh Zare-Mirakabad; Ali Masoudi-Nejad
err分享
err收藏
SynergyImage: image-based model for drug combinations synergy score predictionSynergyImage：基于图像的模型，用于预测药物组合的协同评分
errBMC Bioinformatics
IF3.3
err2025-11-23
err0
errOAAI
errMaryam Mehrabani; Amir Lakizadeh; Alireza Fotuhi Siahpirani; Ali Masoudi-Nejad
err分享
err收藏
Bridging traditional and deep learning methods in H&E histological image normalization: a comprehensive review and introducing a novel framework for comparative analyses连接传统与深度学习方法在H&E组织学图像归一化中的应用：一项全面综述及引入一种用于比较分析的全新框架
errJournal of Advanced Research
IF13
err2025-10-13
err0
errOAAI
errBehnaz Haji Molla Hoseyni; Sevda Imany; Ahmadreza Iranpour; Maryam Mehrabani; Sina Seifouri; Maryam Rafieipour-Jobaneh; Sina Firuzbakht; Ali Masoudi-Nejad
err分享
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Heterogeneity and molecular landscape of melanoma: implications for targeted therapy
errMOLECULAR BIOMEDICINE
IF10.1
err2024-05-10
err6
errOAAI
errBeigi, Yasaman Zohrab; Lanjanian, Hossein; Fayazi, Reyhane; Salimi, Mahdieh; Hoseyni, Behnaz Haji Molla; Noroozizadeh, Mohammad Hafez; Masoudi-Nejad, Ali
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CFSSynergy: Combining Feature-Based and Similarity-Based Methods for Drug Synergy PredictionCFSSynergy: 结合基于特征和基于相似性的药物协同预测方法
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2024-03-22
err24
PREAI
errRafiei, Fatemeh; Zeraati, Hojjat; Abbasi, Karim; Razzaghi, Parvin; Ghasemi, Jahan B.; Parsaeian, Mahboubeh; Masoudi-Nejad, Ali
err分享
err收藏
Deciphering the impact of microbial interactions on COPD exacerbation: An in-depth analysis of the lung microbiome
errHELIYON
IF3.6
err2024-02-01
err0
errOAAI
errTaherkhani, Hamidreza; KavianFar, Azadeh; Aminnezhad, Sargol; Lanjanian, Hossein; Ahmadi, Ali; Azimzadeh, Sadegh; Masoudi-Nejad, Ali
err分享
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Exploring ceRNA networks for key biomarkers in breast cancer subtypes and immune regulation
errSCIENTIFIC REPORTS
IF3.9
err2023-11-27
err3
errOAAI
errTaleghani, Alireza Shariatmadar; Beigi, Yasaman Zohrab; Zare-Mirakabad, Fatemeh; Masoudi-Nejad, Ali
err分享
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Food co-consumption network as a new approach to dietary pattern in non-alcoholic fatty liver disease
errSCIENTIFIC REPORTS
IF3.9
err2023-11-24
err2
errOAAI
errNaghizadeh, Mohammad Mehdi; Osati, Saeed; Homayounfar, Reza; Masoudi-Nejad, Ali
err分享
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A deep learning-based framework for predicting survival-associated groups in colon cancer by integrating multi-omics and clinical data一种基于深度学习的框架，用于通过整合多组学和临床数据来预测结肠癌的生存相关组
errHELIYON
IF3.6
err2023-07-01
err8
errOAAI
errSalimy, Siamak; Lanjanian, Hossein; Abbasi, Karim; Salimi, Mahdieh; Najafi, Ali; Tapak, Leili; Masoudi-Nejad, Ali
err分享
err收藏
DrugRep-KG: Toward Learning a Unified Latent Space for Drug Repurposing Using Knowledge Graphs
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2023-04-06
err10
errOAAI
errGhorbanali, Zahra; Zare-Mirakabad, Fatemeh; Akbari, Mohammad; Salehi, Najmeh; Masoudi-Nejad, Ali
err分享
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Drug repositioning in non-small cell lung cancer (NSCLC) using gene co-expression and drug-gene interaction networks analysis
errSCIENTIFIC REPORTS
IF3.9
err2022-06-08
err15
errOAAI
errMotieGhader, Habib; Tabrizi-Nezhadi, Parinaz; Paskeh, Mahshid Deldar Abad; Baradaran, Behzad; Mokhtarzadeh, Ahad; Hashemi, Mehrdad; Lanjanian, Hossein; Mehdi Jazayeri, Seyed; Maleki, Masoud; Khodadadi, Ehsan; Nematzadeh, Sajjad; Kiani, Farzad; Maghsoudloo, Mazaher; Masoudi-Nejad, Ali
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mRNA-miRNA bipartite networks reconstruction in different tissues of bladder cancer based on gene co-expression network analysis
errSCIENTIFIC REPORTS
IF3.9
err2022-04-07
err6
errOAAI
errAbedi, Zahra; MotieGhader, Habib; Hosseini, Sahar Sadat; Goharrizi, Mohammad Ali Sheikh Beig; Masoudi-Nejad, Ali
err分享
err收藏
Pan-cancer analysis of biological events on cell cycle instability in gastrointestinal cancers with integrative scoring method
errGENOMICS
IF3
err2022-01-01
err5
errOAAI
errMoravveji, Sayyed Sajjad; Khoshbakht, Samane; Mokhtari, Majid; Salimi, Mahdieh; Masoudi-Nejad, Ali
err分享
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High-throughput analysis of the interactions between viral proteins and host cell RNAs
errCOMPUTERS IN BIOLOGY AND MEDICINE
IF6.3
err2021-08-01
err10
errOAAI
errLanjanian, Hossein; Nematzadeh, Sajjad; Hosseini, Shadi; Torkamanian-Afshar, Mahsa; Kiani, Farzad; Moazzam-Jazi, Maryam; Aydin, Nizamettin; Masoudi-Nejad, Ali
err分享
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Revealing transcriptional and post-transcriptional regulatory mechanisms of γ-glutamyl transferase and keratin isoforms as novel cooperative biomarkers in low-grade glioma and glioblastoma multiforme揭示 γ-谷氨酰转移酶和角蛋白同工型的转录和转录后调控机制作为低度胶质瘤和多形性胶质母细胞瘤的新型协同生物标志物
errGENOMICS
IF3
err2021-07-01
err7
errOAAI
errMottaghitalab, Faezeh; Lanjanian, Hossein; Masoudi-Nejad, Ali
err分享
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DNA methylation association with stage progression of head and neck squamous cell carcinoma
errCOMPUTERS IN BIOLOGY AND MEDICINE
IF6.3
err2021-07-01
err7
PREAI
errGhafarpour, Vahid; Khansari, Mohammad; Banaei-Moghaddam, Ali M.; Najafi, Ali; Masoudi-Nejad, Ali
err分享
err收藏
Nodes with the highest control power play an important role at the final level of cooperation in directed networks
errSCIENTIFIC REPORTS
IF3.9
err2021-07-01
err2
errOAAI
errEbrahimi, Ali; Yousefi, Marzieh; Shahbazi, Farhad; Goharrizi, Mohammad Ali Sheikh Beig; Masoudi-Nejad, Ali
err分享
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Structure-based drug repurposing against COVID-19 and emerging infectious diseases: methods, resources and discoveries基于结构的药物再利用对抗新型冠状病毒肺炎和新发传染病: 方法，资源和发现
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2021-05-17
err11
errOAAI
errMasoudi-Sobhanzadeh, Yosef; Salemi, Aysan; Pourseif, Mohammad M.; Jafari, Behzad; Omidi, Yadollah; Masoudi-Nejad, Ali
err分享
err收藏
Deep Learning in Drug Target Interaction Prediction: Current and Future Perspectives药物靶标相互作用预测中的深度学习: 当前和未来展望
errCURRENT MEDICINAL CHEMISTRY
IF3.5
err2021-04-01
err67
PREAI
errAbbasi, Karim; Razzaghi, Parvin; Poso, Antti; Ghanbari-Ara, Saber; Masoudi-Nejad, Ali
err分享
err收藏
A machine learning method based on the genetic and world competitive contests algorithms for selecting genes or features in biological applications
errSCIENTIFIC REPORTS
IF3.9
err2021-02-08
err11
errOAAI
errMasoudi-Sobhanzadeh, Yosef; Motieghader, Habib; Omidi, Yadollah; Masoudi-Nejad, Ali
err分享
err收藏

研究方向

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合作学者
合作期刊
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S
Stephen J. Haggarty
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A
Ahad Mokhtarzadeh
H 指数: 70 · 论文数: 287
Y
Yadollah Omidi
H 指数: 67 · 论文数: 428
M
Marie‐Pierre Dubé
H 指数: 62 · 论文数: 590
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