Todd H. Oakley - Publications, H-index & Citations

Todd H. Oakley

university of california

48H指数

181论文数

9.2K被引数

收录论文 48

发表时间

Visual information in the dark: Bioluminescence and perceptual design through evolution 黑暗中的视觉信息：生物发光与通过进化的感知设计

Functional Ecology

IF5.1

2025-07-18

OAAI

Todd H. Oakley

Discovering genotype-phenotype relationships with machine learning and the Visual Physiology Opsin Database (VPOD)

GIGASCIENCE

IF3.9

2024-10-26

OAAI

Frazer, Seth A.; Baghbanzadeh, Mahdi; Rahnavard, Ali; Crandall, Keith A.; Oakley, Todd H.

Ancient Secretory Pathways Contributed to the Evolutionary Origin of an Ecologically Impactful Bioluminescence System

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2024-10-17

OAAI

Mesrop, Lisa Y.; Minsky, Geetanjali; Drummond, Michael S.; Goodheart, Jessica A.; Proulx, Stephen R.; Oakley, Todd H.

Collective synchrony of mating signals modulated by ecological cues and social signals in bioluminescent sea fireflies

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

IF3.5

2023-11-29

OAAI

Hensley, Nicholai M.; Rivers, Trevor J.; Gerrish, Gretchen A.; Saha, Raj; Oakley, Todd H.

Deep Diversity: Extensive Variation in the Components of Complex Visual Systems across Animals

CELLS

IF5.2

2022-12-08

OAAI

Vocking, Oliver; Macias-Munoz, Aide; Jaeger, Stuart J.; Oakley, Todd H.

Sexual Signals Persist over Deep Time: Ancient Co-option of Bioluminescence for Courtship Displays in Cypridinid Ostracods

SYSTEMATIC BIOLOGY

IF5.7

2022-09-10

OAAI

Ellis, Emily A.; Goodheart, Jessica A.; Hensley, Nicholai M.; Gonzalez, Vanessa L.; Reda, Nicholas J.; Rivers, Trevor J.; Morin, James G.; Torres, Elizabeth; Gerrish, Gretchen A.; Oakley, Todd H.

Different phylogenomic methods support monophyly of enigmatic 'Mesozoa' (Dicyemida plus Orthonectida, Lophotrochozoa)

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

IF3.5

2022-07-06

OAAI

Drabkova, Marie; Kocot, Kevin M.; Halanych, Kenneth M.; Oakley, Todd H.; Moroz, Leonid L.; Cannon, Johanna T.; Kuris, Armand; Garcia-Vedrenne, Ana Elisa; Pankey, M. Sabrina; Ellis, Emily A.; Varney, Rebecca; Stefka, Jan; Zrzavy, Jan

Multi-level convergence of complex traits and the evolution of bioluminescence 复杂性状的多级收敛与生物发光的演化

BIOLOGICAL REVIEWS

IF11.7

2020-12-11

OAAI

Lau, Emily S.; Oakley, Todd H.

Laboratory culture of the California Sea Firefly Vargula tsujii (Ostracoda: Cypridinidae): Developing a model system for the evolution of marine bioluminescence

SCIENTIFIC REPORTS

IF3.9

2020-06-26

OAAI

Goodheart, Jessica A.; Minsky, Geetanjali; Brynjegard-Bialik, Mira N.; Drummond, Michael S.; Munoz, J. David; Fallon, Timothy R.; Schultz, Darrin T.; Weng, Jing-Ke; Torres, Elizabeth; Oakley, Todd H.

Luciferase gene of a Caribbean fireworm (Syllidae) from Puerto Rico

SCIENTIFIC REPORTS

IF3.9

2019-09-10

OAAI

Mitani, Yasuo; Yasuno, Rie; Futahashi, Ryo; Oakley, Todd H.; Ohmiya, Yoshihiro

Context-dependent evolution of ostracod morphology along the ecogeographical gradient of ocean depth

EVOLUTION

IF2.6

2019-05-08

PREAI

Juarez, Bryan H.; Speiser, Daniel, I; Oakley, Todd H.

Phenotypic evolution shaped by current enzyme function in the bioluminescent courtship signals of sea fireflies

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

IF3.5

2019-01-16

OAAI

Hensley, Nicholai M.; Ellis, Emily A.; Gerrish, Gretchen A.; Torres, Elizabeth; Frawley, John P.; Oakley, Todd H.; Rivers, Trevor J.

Symbiotic organs shaped by distinct modes of genome evolution in cephalopods

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2019-01-11

123

OAAI

Belcaid, Mahdi; Casaburi, Giorgio; McAnulty, Sarah J.; Schmidbaur, Hannah; Suria, Andrea M.; Moriano-Gutierrez, Silvia; Pankey, M. Sabrina; Oakley, Todd H.; Kremer, Natacha; Koch, Eric J.; Collins, Andrew J.; Nguyen, Hoan; Lek, Sai; Goncharenko-Foster, Irina; Minx, Patrick; Sodergren, Erica; Weinstock, George; Rokhsar, Daniel S.; McFall-Ngai, Margaret; Simakov, Oleg; Foster, Jamie S.; Nyholm, Spencer V.

Eyes to See: The Astonishing Variety of Vision in Nature

NATURE

IF48.5

2018-11-07

PREAI

Oakley, Todd

Ecological Engineering Helps Maximize Function in Algal Oil Production

APPLIED AND ENVIRONMENTAL MICROBIOLOGY

IF3.7

2018-08-01

OAAI

Jackrel, Sara L.; Narwani, Anita; Bentlage, Bastian; Levine, Robert B.; Hietala, David C.; Savage, Phillip E.; Oakley, Todd H.; Denef, Vincent J.; Cardinale, Bradley J.

Prolific Origination of Eyes in Cnidaria with Co-option of Non-visual Opsins

CURRENT BIOLOGY

IF7.5

2018-08-01

OAAI

Picciani, Natasha; Kerlin, Jamie R.; Sierra, Noemie; Swafford, Andrew J. M.; Ramirez, M. Desmond; Roberts, Nickellaus G.; Cannon, Johanna T.; Daly, Marymegan; Oakley, Todd H.

The Genome Sizes of Ostracod Crustaceans Correlate with Body Size and Evolutionary History, but not Environment

JOURNAL OF HEREDITY

IF2.5

2017-06-08

OAAI

Jeffery, Nicholas W.; Ellis, Emily A.; Oakley, Todd H.; Gregory, T. Ryan

Ecological interactions and coexistence are predicted by gene expression similarity in freshwater green algae

JOURNAL OF ECOLOGY

IF5.6

2017-04-16

OAAI

Narwani, Anita; Bentlage, Bastian; Alexandrou, Markos A.; Fritschie, Keith J.; Delwiche, Charles; Oakley, Todd H.; Cardinale, Bradley J.

Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

IF3.5

2017-03-15

100

OAAI

Tanner, Alastair R.; Fuchs, Dirk; Winkelmann, Inger E.; Gilbert, M. Thomas P.; Pankey, M. Sabrina; Ribeiro, Angela M.; Kocot, Kevin M.; Halanych, Kenneth M.; Oakley, Todd H.; da Fonseca, Rute R.; Pisani, Davide; Vinther, Jakob

The Last Common Ancestor of Most Bilaterian Animals Possessed at Least Nine Opsins

GENOME BIOLOGY AND EVOLUTION

IF2.8

2016-10-26

114

OAAI

Ramirez, M. Desmond; Pairett, Autum N.; Pankey, M. Sabrina; Serb, Jeanne M.; Speiser, Daniel I.; Swafford, Andrew J.; Oakley, Todd H.

研究方向