Hiroki Yamanaka - Publications, H-index & Citations

Hiroki Yamanaka

Ryukoku University

41H指数

126论文数

8.3K被引数

收录论文 17

发表时间

Best Practice Guidelines for Targeted Environmental DNA-Based Proficiency Testing in Non-Regulatory Contexts 非监管背景下基于目标环境DNA的技能测试最佳实践指南

Environmental DNA

IF6.2

2026-01-22

OAAI

Hunter, Margaret E.; Sepulveda, Adam J.; Gleeson, Dianne M.; Trujillo-gonzalez, Alejandro; Helbing, Caren C.; Rees, Helen C.; Jones-slobodian, Devin N.; Miliano, Rachel C.; Minamoto, Toshifumi; Theroux, Susanna; Villacorta Rath, Cecilia; Wilcox, Taylor; Yamanaka, Hiroki; Klymus, Katy E.

Development of a lineage-specific environmental DNA assay to differentiate intraspecific lineages of the endangered freshwater fish, Acheilognathus cyanostigma (Cyprinidae: Acheilognathinae)针对濒危淡水鱼Acheilognathus cyanostigma（鲤科：Acheilognathinae）种内谱系的特异性环境DNA检测方法开发

Conservation Genetics Resources

IF0.9

2026-01-19

PREAI

Ito, Gen; Kitamura, Jyun-ichi; Kawase, Seigo; Asami, Maki; Goto, Yuko; Yamanaka, Hiroki

gmmDenoise: A New Method and R Package for High-Confidence Sequence Variant Filtering in Environmental DNA Amplicon Analysis gmmDenoise：一种用于环境DNA扩增子分析中高置信度序列变异过滤的新方法和R语言程序包

Molecular Ecology Resources

IF5.5

2025-08-04

OAAI

Yusuke Koseki; Hirohiko Takeshima; Ryuji Yoneda; Kaito Katayanagi; Gen Ito; Hiroki Yamanaka

Potential of gelatin hydrogel nonwoven fabrics (Genocel) as a skin substitute in a diabetic mouse skin defect model

REGENERATIVE THERAPY

IF3.5

2024-12-01

OAAI

Li, Yuanjiaozi; Sakamoto, Michiharu; Matsuno, Kumiko; Sawaragi, Eiichi; Zhao, Qiannan; Dong, Hang; Nakano, Takashi; Yamanaka, Hiroki; Tsuge, Itaru; Tabata, Yasuhiko; Morimoto, Naoki

Fecal DNA analysis coupled with the sighting records re-expanded a known distribution of dugongs in Ryukyu Islands after half a century

SCIENTIFIC REPORTS

IF3.9

2024-04-04

OAAI

Ozawa, Hiroyuki; Yoshihama, Takahiro; Gishitomi, Shogo; Watanabe, Natsuki; Ichikawa, Kotaro; Sato, Keiichi; Watanabe, Kenta; Takano, Katsuhiko; Ochiai, Yosuke; Yamanaka, Hiroki; Maruyama, Atsushi

Using eDNA metabarcoding to establish targets for freshwater fish composition following river restoration

GLOBAL ECOLOGY AND CONSERVATION

IF3.4

2023-06-01

OAAI

Ito, Gen; Yamauchi, Hiroshi; Shigeyoshi, Miwa; Ashino, Kousuke; Yonashiro, Chie; Asami, Maki; Goto, Yuko; Duda, Jeffrey J.; Yamanaka, Hiroki

Application of Machine Learning to Environmental DNA Metabarcoding 机器学习在环境DNA元编码中的应用

IEEE ACCESS

IF3.6

2022-01-01

OAAI

Kimura, Mutsumi; Yamanaka, Hiroki; Nakashima, Yasuhiko

Mycorrhizal communities of two closely related species, Pyrola subaphylla and P. japonica, with contrasting degrees of mycoheterotrophy in a sympatric habitat

MYCORRHIZA

IF3.8

2020-11-20

PREAI

Suetsugu, Kenji; Matsuoka, Shunsuke; Shutoh, Kohtaroh; Okada, Hidehito; Taketomi, Shintaro; Onimaru, Kaede; Tanabe, Akifumi S.; Yamanaka, Hiroki

Environmental DNA analysis shows high potential as a tool for estimating intraspecific genetic diversity in a wild fish population

MOLECULAR ECOLOGY RESOURCES

IF5.5

2020-05-21

OAAI

Tsuji, Satsuki; Maruyama, Atsushi; Miya, Masaki; Ushio, Masayuki; Sato, Hirotoshi; Minamoto, Toshifumi; Yamanaka, Hiroki

Real-time multiplex PCR for simultaneous detection of multiple species from environmental DNA: an application on two Japanese medaka species

SCIENTIFIC REPORTS

IF3.9

2018-06-14

OAAI

Tsuji, Satsuki; Iguchi, Yuka; Shibata, Naoki; Teramura, Iori; Kitagawa, Tadao; Yamanaka, Hiroki

Usefulness and limitations of sample pooling for environmental DNA metabarcoding of freshwater fish communities

SCIENTIFIC REPORTS

IF3.9

2017-11-01

OAAI

Sato, Hirotoshi; Sogo, Yuki; Doi, Hideyuki; Yamanaka, Hiroki

Environmental DNA enables detection of terrestrial mammals from forest pond water

MOLECULAR ECOLOGY RESOURCES

IF5.5

2017-06-11

137

OAAI

Ushio, Masayuki; Fukuda, Hisato; Inoue, Toshiki; Makoto, Kobayashi; Kishida, Osamu; Sato, Keiichi; Murata, Koichi; Nikaido, Masato; Sado, Tetsuya; Sato, Yukuto; Takeshita, Masamichi; Iwasaki, Wataru; Yamanaka, Hiroki; Kondoh, Michio; Miya, Masaki

Nuclear internal transcribed spacer-1 as a sensitive genetic marker for environmental DNA studies in common carp Cyprinus carpio

MOLECULAR ECOLOGY RESOURCES

IF5.5

2016-08-31

OAAI

Minamoto, Toshifumi; Uchii, Kimiko; Takahara, Teruhiko; Kitayoshi, Takumi; Tsuji, Satsuki; Yamanaka, Hiroki; Doi, Hideyuki

The use of environmental DNA of fishes as an efficient method of determining habitat connectivity

ECOLOGICAL INDICATORS

IF7.4

2016-03-01

126

OAAI

Yamanaka, Hiroki; Minamoto, Toshifumi

Droplet Digital Polymerase Chain Reaction (PCR) Outperforms Real-Time PCR in the Detection of Environmental DNA from an Invasive Fish Species

ENVIRONMENTAL SCIENCE & TECHNOLOGY

IF11.3

2015-04-20

194

PREAI

Doi, Hideyuki; Takahara, Teruhiko; Minamoto, Toshifumi; Matsuhashi, Saeko; Uchii, Kimiko; Yamanaka, Hiroki

Transmission dynamics of an emerging infectious disease in wildlife through host reproductive cycles

ISME JOURNAL

IF10

2010-08-26

OAAI

Uchii, Kimiko; Telschow, Arndt; Minamoto, Toshifumi; Yamanaka, Hiroki; Honjo, Mie N.; Matsui, Kazuaki; Kawabata, Zen'ichiro

Quantification of Cyprinid Herpesvirus 3 in Environmental Water by Using an External Standard Virus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY

IF3.7

2010-01-01

OAAI

Honjo, Mie N.; Minamoto, Toshifumi; Matsui, Kazuaki; Uchii, Kimiko; Yamanaka, Hiroki; Suzuki, Alata A.; Kohmatsu, Yukihiro; Iida, Takaji; Kawabata, Zen'ichiro

研究方向