James G. Shepherd

mrc university of glasgow centre for virus research

H指数:29

被引数:1.4万

个人简介

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教育背景

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工作经历

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荣誉奖项

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Uncovering the viral aetiology of undiagnosed acute febrile illness in Uganda using metagenomic sequencing

利用宏基因组测序揭示乌干达未诊断急性发热性疾病的病毒病因

NATURE COMMUNICATIONS

IF15.7

2025-03-230

Ashraf, Shirin; Jerome, Hanna; Bugembe, Daniel Lule; Ssemwanga, Deogratius; Byaruhanga, Timothy; Kayiwa, John Timothy; Downing, Robert; Salazar-Gonzalez, Jesus F.; Salazar, Maria G.; Shepherd, James G.; Wilkie, Craig; Davis, Chris; Logan, Nicola; Vattipally, Sreenu B.; Wilkie, Gavin S.; da Silva Filipe, Ana; Ssekagiri, Alfred; Namuwulya, Prossy; Bukenya, Henry; Kigozi, Brian K.; Mcconnell, Weronika Witkowska; Willett, Brian J.; Balinandi, Stephen; Lutwama, Julius; Kaleebu, Pontiano; Bwogi, Josephine; Thomson, Emma C.

Widespread human exposure to ledanteviruses in Uganda: A population study

PLOS NEGLECTED TROPICAL DISEASES

IF3.4

2024-07-081

OAAI

Shepherd, James G.; Ashraf, Shirin; Salazar-Gonzalez, Jesus F.; Salazar, Maria G.; Downing, Robert G.; Bukenya, Henry; Jerome, Hanna; Mpanga, Joseph T.; Davis, Chris; Tong, Lily; Sreenu, Vattipally B.; Atiku, Linda A.; Logan, Nicola; Kajik, Ezekiel; Mukobi, Yafesi; Mungujakisa, Cyrus; Olowo, Michael V.; Tibo, Emmanuel; Wunna, Fred; Jackson Ireland, Hollie; Blunsum, Andrew E.; Owolabi, Iyanuoluwani; da Silva Filipe, Ana; Bwogi, Josephine; Willett, Brian J.; Lutwama, Julius J.; Streicker, Daniel G.; Kaleebu, Pontiano; Thomson, Emma C.

Directions of change in intrinsic case severity across successive SARSCoV-2 variant waves have been inconsistent

在连续的SARSCoV-2变波中，固有情况严重性的变化方向不一致

JOURNAL OF INFECTION

IF11.9

2023-08-0111

OAAI

Pascall, David J.; Vink, Elen; Blacow, Rachel; Bulteel, Naomi; Campbell, Alasdair; Campbell, Robyn; Clifford, Sarah; Davis, Chris; Filipe, Ana da Silva; El Sakka, Noha; Fjodorova, Ludmila; Forrest, Ruth; Goldstein, Emily; Gunson, Rory; Haughney, John; Holden, Matthew T. G.; Honour, Patrick; Hughes, Joseph; James, Edward; Lewis, Tim; MacLean, Oscar; McHugh, Martin; Mollett, Guy; Nyberg, Tommy; Onishi, Yusuke; Parcell, Ben; Ray, Surajit; Robertson, David L.; Seaman, Shaun R.; Shabaan, Sharif; Shepherd, James G.; Smollett, Katherine; Templeton, Kate; Wastnedge, Elizabeth; Wilkie, Craig; Williams, Thomas; Thomson, Emma C.

Emerging Rhabdoviruses and Human Infection

BIOLOGY-BASEL

IF3.5

2023-06-1710

OAAI

Risk factors for Crimean-Congo Haemorrhagic Fever (CCHF) virus exposure in farming communities in Uganda

JOURNAL OF INFECTION

IF11.9

2022-12-0116

OAAI

Non-epidemic HCV genotypes in low- and middle-income countries and the risk of resistance to current direct-acting antiviral regimens

JOURNAL OF HEPATOLOGY

IF33

2021-08-0130

OAAI

Genetic epidemiology of SARS-CoV-2 transmission in renal dialysis units - A high risk community-hospital interface

JOURNAL OF INFECTION

IF11.9

2021-07-016

OAAI

Li, Kathy K.; Woo, Y. Mun; Stirrup, Oliver; Hughes, Joseph; Ho, Antonia; Filipe, Ana Da Silva; Johnson, Natasha; Smollett, Katherine; Mair, Daniel; Carmichael, Stephen; Tong, Lily; Nichols, Jenna; Aranday-Cortes, Elihu; Brunker, Kirstyn; Parr, Yasmin A.; Nomikou, Kyriaki; McDonald, Sarah E.; Niebel, Marc; Asamaphan, Patawee; Sreenu, Vattipally B.; Robertson, David L.; Taggart, Aislynn; Jesudason, Natasha; Shah, Rajiv; Shepherd, James; Singer, Josh; Taylor, Alison H. M.; Cousland, Zoe; Price, Jonathan; Lees, Jennifer S.; Jones, Timothy P. W.; Lopez, Carlos Varon; MacLean, Alasdair; Starinskij, Igor; Gunson, Rory; Morris, Scott T. W.; Thomson, Peter C.; Geddes, Colin C.; Traynor, Jamie P.; Breuer, Judith; Thomson, Emma C.; Mark, Patrick B.

Rapid feedback on hospital onset SARS-CoV-2 infections combining epidemiological and sequencing data

ELIFE

IF0

2021-06-2925

Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data

GENOME RESEARCH

IF5.5

2021-03-1537

OAAI

Parker, Matthew D.; Lindsey, Benjamin B.; Leary, Shay; Gaudieri, Silvana; Chopra, Abha; Wyles, Matthew; Angyal, Adrienn; Green, Luke R.; Parsons, Paul; Tucker, Rachel M.; Brown, Rebecca; Groves, Danielle; Johnson, Katie; Carrilero, Laura; Heffer, Joe; Patridge, David G.; Evans, Cariad; Raza, Mohammad; Keeley, Alexander J.; Smith, Nikki; Filipe, Ana Da Silva; Shepherd, James G.; Davis, Chris; Bennett, Sahan; Sreenu, Vattipally B.; Kohl, Alain; Aranday-Cortes, Elihu; Tong, Lily; Nichols, Jenna; Thomson, Emma C.; Wang, Dennis; Mallal, Simon; de Silva, Thushan I.

SARS-CoV-2 within-host diversity and transmission

Science

IF45.8

2021-01-010

OAAI

Katrina Lythgoe; Matthew D. Hall; Luca Ferretti A; Mariateresa de Cesare; George MacIntyre-Cockett; Amy Trebes; Monique Ingrid Andersson; Newton Otieno Otecko; Emma L. Wise; Nathan A. Moore; Jessica Lynch; Stephen P. Kidd; Nicholas Cortes; Matilde Mori; Rebecca J. Williams; Gabrielle Vernet; Anita Justice; Angie Green; Samuel M. Nicholls; M. Azim Ansari; Lucie Abeler‐Dörner; Catrin E. Moore; Tim Peto; David W. Eyre; Robert Shaw; Peter Simmonds K; David Buck; John A. Todd; on behalf of the Oxford Virus Sequencing Analysis Group (OVSG); Thomas R. Connor; Shirin Ashraf; Ana da Silva Filipe; James G. Shepherd; Emma C. Thomson; David Bonsall; Christophe Fraser; Tanya Golubchik

Seoul Virus Associated with Pet Rats, Scotland, UK, 2019

EMERGING INFECTIOUS DISEASES

IF6.6

2021-01-015

OAAI

A case of rifampicin-induced haemolysis

INTERNATIONAL JOURNAL OF TUBERCULOSIS AND LUNG DISEASE

IF3.1

2019-02-015

PREAI

The prevention of progression of arterial disease and diabetes (POPADAD) trial: factorial randomised placebo controlled trial of aspirin and antioxidants in patients with diabetes and asymptomatic peripheral arterial disease

BMJ-BRITISH MEDICAL JOURNAL