John W. Brown - Publications, H-index & Citations

John W. Brown

indiana university system

68H指数

423论文数

1.7W被引数

收录论文 96

发表时间

Pulmonary Autograft Mitral Valve Replacement (Ross II Procedure): More Than Two Decades of Follow-up From a Single Center in the United States

WORLD JOURNAL FOR PEDIATRIC AND CONGENITAL HEART SURGERY

IF1

2026-05-01

PREAI

Hughes, Aeleia F.; Rodefeld, Mark D.; Turrentine, Mark W.; Brown, John W.

BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification

PLANT JOURNAL

IF5.7

2022-07-19

OAAI

Coulter, Max; Entizne, Juan Carlos; Guo, Wenbin; Bayer, Micha; Wonneberger, Ronja; Milne, Linda; Schreiber, Miriam; Haaning, Allison; Muehlbauer, Gary J.; McCallum, Nicola; Fuller, John; Simpson, Craig; Stein, Nils; Brown, John W. S.; Waugh, Robbie; Zhang, Runxuan

A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

GENOME BIOLOGY

IF9.4

2022-07-07

OAAI

Zhang, Runxuan; Kuo, Richard; Coulter, Max; Calixto, Cristiane P. G.; Entizne, Juan Carlos; Guo, Wenbin; Marquez, Yamile; Milne, Linda; Riegler, Stefan; Matsui, Akihiro; Tanaka, Maho; Harvey, Sarah; Gao, Yubang; Wiessner-Kroh, Theresa; Paniagua, Alejandro; Crespi, Martin; Denby, Katherine; Ben Hur, Asa; Huq, Enamul; Jantsch, Michael; Jarmolowski, Artur; Koester, Tino; Laubinger, Sascha; Li, Qingshun Quinn; Gu, Lianfeng; Seki, Motoaki; Staiger, Dorothee; Sunkar, Ramanjulu; Szweykowska-Kulinska, Zofia; Tu, Shih-Long; Wachter, Andreas; Waugh, Robbie; Xiong, Liming; Zhang, Xiao-Ning; Conesa, Ana; Reddy, Anireddy S. N.; Barta, Andrea; Kalyna, Maria; Brown, John W. S.

ANNALS OF THORACIC SURGERY

IF3.9

2022-02-01

OAAI

Callahan, Connor P.; Jegatheeswaran, Anusha; Blackstone, Eugene H.; Karamlou, Tara; Baird, Christopher W.; Ramakrishnan, Karthik; Herrmann, Jeremy L.; Brown, John W.; Nelson, Jennifer S.; Polimenakos, Anastasios C.; Lambert, Linda M.; Eckhauser, Aaron W.; Kirklin, James K.; DeCampli, William M.; Aghaei, Nabi; St Louis, James D.; McCrindle, Brian W.

Two Decades Using Stentless Porcine Aortic Root in Right Ventricular Outflow Tract Reconstruction

ANNALS OF THORACIC SURGERY

IF3.9

2021-09-01

OAAI

Kasten, Michael W.; Herrmann, Jeremy L.; Cox, Morgan; McCurdy, Chelsea; Tragesser, Cody; Turrentine, Mark W.; Rodefeld, Mark; Brown, John W.

3D RNA-seq: a powerful and flexible tool for rapid and accurate differential expression and alternative splicing analysis of RNA-seq data for biologists 3D rna-seq: 一个强大而灵活的工具，用于生物学家对rna-seq数据进行快速准确的差异表达和选择性剪接分析

RNA BIOLOGY

IF3.4

2020-12-19

OAAI

Guo, Wenbin; Tzioutziou, Nikoleta A.; Stephen, Gordon; Milne, Iain; Calixto, Cristiane P. G.; Waugh, Robbie; Brown, John W. S.; Zhang, Runxuan

Illuminating the dark side of the human transcriptome with long read transcript sequencing 用长读段转录本测序照亮人类转录组的阴暗面

BMC GENOMICS

IF3.7

2020-10-30

OAAI

Kuo, Richard I.; Cheng, Yuanyuan; Zhang, Runxuan; Brown, John W. S.; Smith, Jacqueline; Archibald, Alan L.; Burt, David W.

Right Ventricular Outflow Tract Reconstruction in Infant Truncus Arteriosus: A 37-year Experience

ANNALS OF THORACIC SURGERY

IF3.9

2020-08-01

OAAI

Herrmann, Jeremy L.; Larson, Emilee E.; Mastropietro, Christopher W.; Rodefeld, Mark D.; Turrentine, Mark W.; Nozaki, Ryoko; Brown, John W.

Nonsense-Mediated RNA Decay Factor UPF1 Is Critical for Posttranscriptional and Translational Gene Regulation in Arabidopsis

PLANT CELL

IF11.6

2020-07-14

OAAI

Raxwal, Vivek K.; Simpson, Craig G.; Gloggnitzer, Jiradet; Entinze, Juan Carlos; Guo, Wenbin; Zhang, Runxuan; Brown, John W. S.; Riha, Karel

The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana (vol 42, 1224, 2014)

NUCLEIC ACIDS RESEARCH

IF13.1

2020-01-20

OAAI

Raczynska, Katarzyna Dorota; Stepien, Agata; Kierzkowski, Daniel; Kalak, Malgorzata; Bajczyk, Mateusz; McNicol, Jim; Simpson, Craig G.; Szweykowska-Kulinska, Zofia; Brown, John W. S.; Jarmolowski, Artur

Alternative Splicing of Circadian Clock Genes Correlates With Temperature in Field-Grown Sugarcane

FRONTIERS IN PLANT SCIENCE

IF4.8

2019-12-23

OAAI

Dantas, Luiza L. B.; Calixto, Cristiane P. G.; Dourado, Maira M.; Carneiro, Monalisa S.; Brown, John W. S.; Hotta, Carlos T.

BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq

BMC GENOMICS

IF3.7

2019-12-11

OAAI

Rapazote-Flores, Paulo; Bayer, Micha; Milne, Linda; Mayer, Claus-Dieter; Fuller, John; Guo, Wenbin; Hedley, Pete E.; Morris, Jenny; Halpin, Claire; Kam, Jason; Mckim, Sarah M.; Zwirek, Monika; Casao, M. Cristina; Barakate, Abdellah; Schreiber, Miriam; Stephen, Gordon; Zhang, Runxuan; Brown, John W. S.; Waugh, Robbie; Simpson, Craig G.

Light Regulates Plant Alternative Splicing through the Control of Transcriptional Elongation

MOLECULAR CELL

IF16.6

2019-03-01

OAAI

Godoy Herz, Micaela A.; Guillermina Kubaczka, M.; Brzyzek, Grzegorz; Servi, Lucas; Krzyszton, Michal; Simpson, Craig; Brown, John; Swiezewski, Szymon; Petrillo, Ezequiel; Kornblihtt, Alberto R.

Cold-Dependent Expression and Alternative Splicing of Arabidopsis Long Non-coding RNAs 拟南芥长链非编码rna的冷依赖性表达和可变剪接

FRONTIERS IN PLANT SCIENCE

IF4.8

2019-02-28

OAAI

Calixto, Cristiane P. G.; Tzioutziou, Nikoleta A.; James, Allan B.; Hornyik, Csaba; Guo, Wenbin; Zhang, Runxuan; Nimmo, Hugh G.; Brown, John W. S.

Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome

PLANT CELL

IF11.6

2018-05-15

201

OAAI

Calixto, Cristiane P. G.; Guo, Wenbin; James, Allan B.; Tzioutziou, Nikoleta A.; Entizne, Juan Carlos; Panter, Paige E.; Knight, Heather; Nimmo, Hugh G.; Zhang, Runxuan; Brown, John W. S.

How does temperature affect splicing events? Isoform switching of splicing factors regulates splicing of LATE ELONGATED HYPOCOTYL (LHY)

PLANT CELL AND ENVIRONMENT

IF6.3

2018-05-02

OAAI

James, Allan B.; Calixto, Cristiane P. G.; Tzioutziou, Nikoleta A.; Guo, Wenbin; Zhang, Runxuan; Simpson, Craig G.; Jiang, Wenying; Nimmo, Gillian A.; Brown, John W. S.; Nimmo, Hugh G.

A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing

NUCLEIC ACIDS RESEARCH

IF13.1

2017-04-11

191

OAAI

Zhang, Runxuan; Calixto, Cristiane P. G.; Marquez, Yamile; Venhuizen, Peter; Tzioutziou, Nikoleta A.; Guo, Wenbin; Spensley, Mark; Entizne, Juan Carlos; Lewandowska, Dominika; ten Have, Sara; Frey, Nicolas Frei Dit; Hirt, Heribert; James, Allan B.; Nimmo, Hugh G.; Barta, Andrea; Kalyna, Maria; Brown, John W. S.

Performance of SynerGraft Decellularized Pulmonary Allografts Compared With Standard Cryopreserved Allografts: Results From Multiinstitutional Data

ANNALS OF THORACIC SURGERY

IF3.9

2017-03-01

OAAI

Bibevski, Steve; Ruzmetov, Mark; Fortuna, Randall S.; Turrentine, Mark W.; Brown, John W.; Ohye, Richard G.

The Arabidopsis SR45 Splicing Factor, a Negative Regulator of Sugar Signaling, Modulates SNF1-Related Protein Kinase 1 Stability

PLANT CELL

IF11.6

2016-07-19

OAAI

Carvalho, Raquel F.; Szakonyi, Dora; Simpson, Craig G.; Barbosa, Ines C. R.; Brown, John W. S.; Baena-Gonzalez, Elena; Duque, Paula

Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation

NATURE GENETICS

IF31.8

2016-07-18

206

OAAI

Russell, Joanne; Mascher, Martin; Dawson, Ian K.; Kyriakidis, Stylianos; Calixto, Cristiane; Freund, Fabian; Bayer, Micha; Milne, Iain; Marshall-Griffiths, Tony; Heinen, Shane; Hofstad, Anna; Sharma, Rajiv; Himmelbach, Axel; Knauft, Manuela; van Zonneveld, Maarten; Brown, John W. S.; Schmid, Karl; Kilian, Benjamin; Muehlbauer, Gary J.; Stein, Nils; Waugh, Robbie

研究方向