Thomas J. Baum - Publications, H-index & Citations

Thomas J. Baum

Iowa State University

62H指数

180论文数

1.3W被引数

收录论文 78

发表时间

Unseen Struggles: How Plant-Parasitic Nematodes Manipulate ROS Signaling in Host Plants 未见挣扎：植物寄生线虫如何操纵宿主植物中的活性氧信号

Molecular Plant-Microbe Interactions

IF3.4

2026-03-01

PREAI

Kumar, Anil; Changwal, Chunoti; Baum, Thomas J.

Genome reannotation and gland-specific transcriptome analysis identify new effector candidates in Meloidogyne chitwoodi

PLOS PATHOGENS

IF4.9

2025-11-01

PREAI

Teixeira, Marcella; Ko, Itsuhiro; Bali, Sapinder; Vieira, Paulo; Maier, Thomas R.; Baum, Thomas J.; Gleason, Cynthia

A novel toolbox of GATEWAY-compatible vectors for rapid functional gene analysis in soybean composite plants

PLANT CELL REPORTS

IF4.5

2025-04-01

OAAI

Mejias, Joffrey; Margets, Alexandra; Bredow, Melissa; Foster, Jessica; Khwanbua, Ekkachai; Goshon, Jackson; Maier, Thomas R.; Whitham, Steven A.; Innes, Roger W.; Baum, Thomas J.

The SUbventral- Gland Regulator (SUGR-1) of nematode virulence 线虫毒力的下丘脑-腺体调节器(SUGR-1)

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2025-03-10

OAAI

Pellegrin, Clement; Damm, Anika; Sperling, Alexis L.; Molloy, Beth; Shin, Dio S.; Long, Jonathan; Brett, Paul; Iguh, Tochukwu Chisom; Kranse, Olaf P.; Bravo, Andrea Diaz-Tendero; Lynch, Sarah Jane; Senatori, Beatrice; Vieira, Paulo; Mejias, Joffrey; Kumar, Anil; Masonbrink, Rick E.; Maier, Tom R.; Baum, Thomas J.; van den Akker, Sebastian

A user-friendly software to accurately count and measure cysts from the parasitic nematode Heterodera glycines

SCIENTIFIC REPORTS

IF3.9

2025-02-06

OAAI

Mejias, Joffrey; Kozlowski, Djampa K. L.; Goshon, Jackson; Maier, Thomas R.; Baum, Thomas J.

The Soybean Cyst Nematode Effector Cysteine Protease 1 (CPR1) Targets a Mitochondrial Soybean Branched-Chain Amino Acid Aminotransferase (GmBCAT1)

molecular plant

IF3.4

2024-11-01

PREAI

Margets, Alexandra; Foster, Jessica; Kumar, Anil; Maier, Tom R.; Masonbrink, Rick; Mejias, Joffrey; Baum, Thomas J.; Innes, Roger W.

The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes (vol 20, 119, 2019)

BMC GENOMICS

IF3.7

2024-05-31

OAAI

Masonbrink, Rick; Maier, Tom R.; Muppirala, Usha; Seetharam, Arun S.; Lord, Etienne; Juvale, Parijat S.; Schmutz, Jeremy; Johnson, Nathan T.; Korkin, Dmitry; Mitchum, Melissa G.; Mimee, Benjamin; den Akker, Sebastian Eves-van; Hudson, Matthew; Severin, Andrew J.; Baum, Thomas J.

Unlocking the development- and physiology-altering ′effector toolbox′ of plant-parasitic nematodes

Trends in Parasitology

IF6.6

2023-09-01

OAAI

Molloy, Beth; Baum, Thomas; Eves-van den Akker, Sebastian

The genome and lifestage-specific transcriptomes of a plant-parasitic nematode and its host reveal susceptibility genes involved in trans-kingdom synthesis of vitamin B5 植物寄生线虫及其宿主的基因组和生活特定转录组揭示了与维生素B5的跨王国合成有关的易感基因

NATURE COMMUNICATIONS

IF15.7

2022-10-19

OAAI

Siddique, Shahid; Radakovic, Zoran S.; Hiltl, Clarissa; Pellegrin, Clement; Baum, Thomas J.; Beasley, Helen; Bent, Andrew F.; Chitambo, Oliver; Chopra, Divykriti; Danchin, Etienne G. J.; Grenier, Eric; Habash, Samer S.; Hasan, M. Shamim; Helder, Johannes; Hewezi, Tarek; Holbein, Julia; Holterman, Martijn; Janakowski, Slawomir; Koutsovoulos, Georgios D.; Kranse, Olaf P.; Lozano-Torres, Jose L.; Maier, Tom R.; Masonbrink, Rick E.; Mendy, Badou; Riemer, Esther; Sobczak, Miroslaw; Sonawala, Unnati; Sterken, Mark G.; Thorpe, Peter; van Steenbrugge, Joris J. M.; Zahid, Nageena; Grundler, Florian; Eves-van den Akker, Sebastian

Recognition and Response in Plant-Nematode Interactions

ANNUAL REVIEW OF PHYTOPATHOLOGY

IF11.9

2022-08-26

PREAI

Siddique, Shahid; Coomer, Alison; Baum, Thomas; Williamson, Valerie Moroz

miR778 mediates gene expression, histone modification, and DNA methylation during cyst nematode parasitism

PLANT PHYSIOLOGY

IF6.9

2022-05-17

OAAI

Bennett, Morgan; Piya, Sarbottam; Baum, Thomas J.; Hewezi, Tarek

Targeted transcriptomics reveals signatures of large-scale independent origins and concerted regulation of effector genes in Radopholus similis

PLOS PATHOGENS

IF4.9

2021-11-08

OAAI

Vieira, Paulo; Myers, Roxana Y.; Pellegrin, Clement; Wram, Catherine; Hesse, Cedar; Maier, Thomas R.; Shao, Jonathan; Koutsovoulos, Georgios D.; Zasada, Inga; Matsumoto, Tracie; Danchin, Etienne G. J.; Baum, Thomas J.; Eves-van den Akker, Sebastian; Nemchinov, Lev G.

Esophageal Gland RNA-Seq Resource of a Virulent and Avirulent Population of the Soybean Cyst Nematode Heterodera glycines

molecular plant

IF3.4

2021-09-01

OAAI

Maier, Tom R.; Masonbrink, Rick E.; Vijayapalani, Paramasivan; Gardner, Michael; Howland, Amanda D.; Mitchum, Melissa G.; Baum, Thomas J.

A chromosomal assembly of the soybean cyst nematode genome

MOLECULAR ECOLOGY RESOURCES

IF5.5

2021-06-10

OAAI

Masonbrink, Rick E.; Maier, Tom R.; Hudson, Matthew; Severin, Andrew; Baum, Thomas

A new esophageal gland transcriptome reveals signatures of large scale de novo effector birth in the root lesion nematode Pratylenchus penetrans

BMC GENOMICS

IF3.7

2020-10-23

OAAI

Vieira, Paulo; Shao, Jonathan; Vijayapalani, Paramasivan; Maier, Thomas R.; Pellegrin, Clement; Eves-van den Akker, Sebastian; Baum, Thomas J.; Nemchinov, Lev G.

Large tandem duplications affect gene expression, 3D organization, and plant-pathogen response

GENOME RESEARCH

IF5.5

2020-10-08

OAAI

Picart-Picolo, Ariadna; Grob, Stefan; Picault, Nathalie; Franek, Michal; Llauro, Christel; Halter, Thierry; Maier, Tom R.; Jobet, Edouard; Descombin, Julie; Zhang, Panpan; Paramasivan, Vijayapalani; Baum, Thomas J.; Navarro, Lionel; Dvorackova, Martina; Mirouze, Marie; Pontvianne, Frederic

SCNBase: a genomics portal for the soybean cyst nematode (Heterodera glycines)

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

IF3.6

2019-11-13

OAAI

Masonbrink, Rick; Maier, Tom R.; Seetharam, Arun S.; Juvale, Parijat S.; Baber, Levi; Baum, Thomas J.; Severin, Andrew J.

A role for Arabidopsis growth-regulating factors 1 and 3 in growth-stress antagonism

JOURNAL OF EXPERIMENTAL BOTANY

IF5.7

2019-11-08

OAAI

Piya, Sarbottam; Liu, Jinyi; Burch-Smith, Tessa; Baum, Thomas J.; Hewezi, Tarek

Re-targeting of a plant defense protease by a cyst nematode effector

PLANT JOURNAL

IF5.7

2019-04-01

OAAI

Pogorelko, Gennady V.; Juvale, Parijat S.; Rutter, William B.; Huetten, Marion; Maier, Thomas R.; Hewezi, Tarek; Paulus, Judith; van der Hoorn, Renier A. L.; Grundler, Florian M. W.; Siddique, Shahid; Lionetti, Vincenzo; Zabotina, Olga A.; Baum, Thomas J.

The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes

BMC GENOMICS

IF3.7

2019-02-07

OAAI

Masonbrink, Rick; Maier, Tom R.; Muppirala, Usha; Seetharam, Arun S.; Lord, Etienne; Juvale, Parijat S.; Schmutz, Jeremy; Johnson, Nathan T.; Korkin, Dmitry; Mitchum, Melissa G.; Mimee, Benjamin; Eves-van den Akker, Sebastian; Hudson, Matthew; Severin, Andrew J.; Baum, Thomas J.

研究方向