Sofie Van Gassen - Publications, H-index & Citations

Sofie Van Gassen

VIB Center for Inflammation Research

23H指数

75论文数

7.1K被引数

收录论文 31

发表时间

CytoScan: Automated Detection of Technical Anomalies for Cytometry Quality Control 流式细胞仪质量控制的技术异常自动检测

Cytometry Part A

IF2.1

2026-07-06

OAAI

Tim R. Mocking; Felix Zwolle; Yejin Park; Angèle Kelder; Yvan Saeys; Jacqueline Cloos; Sofie van Gassen; Costa Bachas

CompensAID: An Automated Detection Tool for Reference Errors CompensAID：一种自动检测参考文献错误的工具

Cytometry Part A

IF2.1

2026-02-01

OAAI

Olsman, Rosan; Bonte, Sarah; Hofmans, Mattias; Buysse, Malicorne; Van Der Borght, Katrien; Saeys, Yvan; van der Velden, Vincent H. J.; Van Gassen, Sofie

Cross-species cellular mapping and humanization of Fcγ receptors to advance antibody modeling Fc γ 受体的跨物种细胞定位和人源化以推进抗体建模

Science Immunology

IF16.3

2026-01-30

PREAI

Karel F. A. Van Damme; Dorine Sichien; Katrien Van der Borght; Justine Van Moorleghem; Sofie Van Gassen; Joseph Jorssen; Seppe De Winter; Elisabeth De Leeuw; Caihong Wang; Qingqing Chai; Anna Brotcke Zumsteg; Michael A. Schmid; Victor Bosteels; Pieter De Bleser; Manon Vanheerswynghels; Sofie De Prijck; Anna Bujko; Clint De Nolf; Martijn J. Schuijs; Bram Van Den Eeckhout; Ilse Rogiers; Robin Browaeys; Flore Thielemans; Katrien Quintelier; Jinke D’Hont; Tino Hochepied; Patricia Isnard Petit; Séverine Augier; Rachel Courtois; Stijn Verwaerde; Stijn Vanhee; Sjoerd Schetters; Charlotte L. Scott; Stein Aerts; Yvan Saeys; Alan J. Korman; Fabio Benigni; Davide Corti; Sophie Janssens; Niels Vandamme; Antonio P. Baptista; Christophe Desmet; Dirk Elewaut; Hamida Hammad; Ariane Morel; Eric Vivier; Fabiane Sônego; Kader Thiam; Sofie Voet; Bianca Balbino; Bart N. Lambrecht

CytoNormPy Enables a Fast and Scalable Removal of Batch Effects in Cytometry Datasets CytoNormPy 能够实现对流式细胞术数据集中批次效应的快速且可扩展的去除。

Cytometry Part A

IF2.1

2025-08-29

OAAI

Tarik Exner; Nicolaj Hackert; Luca Leomazzi; Sofie Van Gassen; Yvan Saeys; Hanns-Martin Lorenz; Ricardo Grieshaber-Bouyer

Myelodysplastic neoplasms dissected into indolent, leukaemic and unfavourable subtypes by computational clustering of haematopoietic stem and progenitor cells

LEUKEMIA

IF13.4

2024-03-08

OAAI

van Spronsen, Margot F.; Van Gassen, Sofie; Duetz, Carolien; Westers, Theresia M.; Saeys, Yvan; van de Loosdrecht, Arjan A.

Gut Inflammation in axial Spondyloarthritis patients is characterized by a marked Type 17 skewed mucosal Innate-like T cell signature

ARTHRITIS & RHEUMATOLOGY

IF10.9

2023-10-04

OAAI

Mortier, Celine; Quintelier, Katrien; De Craemer, Ann-Sophie; Renson, Thomas; Deroo, Liselotte; Dumas, Emilie; Verheugen, Eveline; Coudenys, Julie; Decruy, Tine; Lukasik, Zuzanna; Van Gassen, Sofie; Saeys, Yvan; Hoorens, Anne; Lobaton, Triana; van den Bosch, Filip; van de Wiele, Tom; Venken, Koen; Elewaut, Dirk

A robust pipeline for high-content, high-throughput immunophenotyping reveals age- and genetics-dependent changes in blood leukocytes

CELL REPORTS METHODS

IF4.5

2023-10-01

OAAI

Liechti, Thomas; Van Gassen, Sofie; Beddall, Margaret; Ballard, Reid; Iftikhar, Yaser; Du, Renguang; Venkataraman, Thiagarajan; Novak, David; Mangino, Massimo; Perfetto, Stephen; Larman, H. Benjamin; Spector, Tim; Saeys, Yvan; Roederer, Mario

LXR signaling controls homeostatic dendritic cell maturation

SCIENCE IMMUNOLOGY

IF16.3

2023-05-26

OAAI

Bosteels, Victor; Marechal, Sandra; De Nolf, Clint; Rennen, Sofie; Maelfait, Jonathan; Tavernier, Simon J.; Vetters, Jessica; Van De Velde, Evelien; Fayazpour, Farzaneh; Deswarte, Kim; Lamoot, Alexander; Van Duyse, Julie; Martens, Liesbet; Bosteels, Cedric; Roelandt, Ria; Emmaneel, Annelies; Van Gassen, Sofie; Boon, Louis; Van Isterdael, Gert; Guillas, Isabelle; Vandamme, Niels; Hoeglinger, Doris; Geest, Bruno G. De; Le Goff, Wilfried; Saeys, Yvan; Ravichandran, Kodi S.; Lambrecht, Bart N.; Janssens, Sophie

Single-cell molecular profiling using ex vivo functional readouts fuels precision oncology in glioblastoma

CELLULAR AND MOLECULAR LIFE SCIENCES

IF6.2

2023-05-12

OAAI

Panovska, Dena; Nazari, Pouya; Cole, Basiel; Creemers, Pieter-Jan; Derweduwe, Marleen; Solie, Lien; Van Gassen, Sofie; Claeys, Annelies; Verbeke, Tatjana; Cohen, Elizabeth F.; Tolstorukov, Michael Y.; Saeys, Yvan; van der Planken, David; Bosisio, Francesca M.; Put, Eric; Bamps, Sven; Clement, Paul M.; Verfaillie, Michiel; Sciot, Raf; Ligon, Keith L.; De Vleeschouwer, Steven; Antoranz, Asier; De Smet, Frederik

Dysregulation of developmental and cell type-specific expression of glycoconjugates on hematopoietic cells: a new characteristic of myelodysplastic neoplasms (MDS)

LEUKEMIA

IF13.4

2023-02-09

OAAI

van Spronsen, Margot F.; Horrevorts, Sophie; Cali, Claudia; Westers, Theresia M.; Van Gassen, Sofie; Saeys, Yvan; van Vliet, Sandra J.; van Kooyk, Yvette; van de Loosdrecht, Arjan A.

The Euroflow PID Orientation Tube in the diagnostic workup of primary immunodeficiency: Daily practice performance in a tertiary university hospital

FRONTIERS IN IMMUNOLOGY

IF5.9

2022-09-13

OAAI

Neirinck, Jana; Emmaneel, Annelies; Buysse, Malicorne; Philippe, Jan; Van Gassen, Sofie; Saeys, Yvan; Bossuyt, Xavier; De Buyser, Stefanie; van der Burg, Mirjam; Perez-Andres, Martin; Orfao, Alberto; van Dongen, Jacques J. M.; Lambrecht, Bart N.; Kerre, Tessa; Hofmans, Mattias; Haerynck, Filomeen; Bonroy, Carolien

Challenges in translational machine learning 转化机器学习的挑战

HUMAN GENETICS

IF3.6

2022-03-04

OAAI

Couckuyt, Artuur; Seurinck, Ruth; Emmaneel, Annelies; Quintelier, Katrien; Novak, David; Van Gassen, Sofie; Saeys, Yvan

Presence of innate lymphoid cells in allogeneic hematopoietic grafts correlates with reduced graft-versus-host disease

CYTOTHERAPY

IF3.2

2022-03-01

OAAI

Kroeze, Anna; van Hoeven, Vera; Verheij, Myrddin W.; Turksma, Annelies W.; Weterings, Naomi; van Gassen, Sofie; Zeerleder, Sacha S.; Blom, Bianca; Voermans, Carlijn; Hazenberg, Mette D.

Operational tolerance after hematopoietic stem cell transplantation is characterized by distinct transcriptional, phenotypic, and metabolic signatures

SCIENCE TRANSLATIONAL MEDICINE

IF14.6

2022-02-23

OAAI

Dubouchet, Laetitia; Todorov, Helena; Seurinck, Ruth; Vallet, Nicolas; Van Gassen, Sofie; Corneau, Aurelien; Blanc, Catherine; Zouali, Habib; Boland, Anne; Deleuze, Jean-Francois; Ingram, Brian; de Latour, Regis Peffault; Saeys, Yvan; Socie, Gerard; Michonneau, David

An updated guide for the perplexed: cytometry in the high-dimensional era 困惑的最新指南: 高维时代的细胞计数

NATURE IMMUNOLOGY

IF27.6

2021-09-06

PREAI

Liechti, Thomas; Weber, Lukas M.; Ashhurst, Thomas M.; Stanley, Natalie; Prlic, Martin; Van Gassen, Sofie; Mair, Florian

Monocyte-driven atypical cytokine storm and aberrant neutrophil activation as key mediators of COVID-19 disease severity

NATURE COMMUNICATIONS

IF15.7

2021-07-05

162

OAAI

Vanderbeke, L.; Van Mol, P.; Van Herck, Y.; De Smet, F.; Humblet-Baron, S.; Martinod, K.; Antoranz, A.; Arijs, I.; Boeckx, B.; Bosisio, F. M.; Casaer, M.; Dauwe, D.; De Wever, W.; Dooms, C.; Dreesen, E.; Emmaneel, A.; Filtjens, J.; Gouwy, M.; Gunst, J.; Hermans, G.; Jansen, S.; Lagrou, K.; Liston, A.; Lorent, N.; Meersseman, P.; Mercier, T.; Neyts, J.; Odent, J.; Panovska, D.; Penttila, P. A.; Pollet, E.; Proost, P.; Qian, J.; Quintelier, K.; Raes, J.; Rex, S.; Saeys, Y.; Sprooten, J.; Tejpar, S.; Testelmans, D.; Thevissen, K.; Van Buyten, T.; Vandenhaute, J.; Van Gassen, S.; Velasquez Pereira, L. C.; Vos, R.; Weynand, B.; Wilmer, A.; Yserbyt, J.; Garg, A. D.; Matthys, P.; Wouters, C.; Lambrechts, D.; Wauters, E.; Wauters, J.

Analyzing high-dimensional cytometry data using FlowSOM 使用FlowSOM分析高维细胞计数数据

NATURE PROTOCOLS

IF16

2021-06-25

PREAI

Quintelier, Katrien; Couckuyt, Artuur; Emmaneel, Annelies; Aerts, Joachim; Saeys, Yvan; Van Gassen, Sofie

High dimensional profiling identifies specific immune types along the recovery trajectories of critically ill COVID19 patients

CELLULAR AND MOLECULAR LIFE SCIENCES

IF6.2

2021-03-13

OAAI

Penttila, P. A.; Van Gassen, S.; Panovska, D.; Vanderbeke, L.; Van Herck, Y.; Quintelier, K.; Emmaneel, A.; Filtjens, J.; Malengier-Devlies, B.; Ahmadzadeh, K.; Van Mol, P.; Borras, D. M.; Antoranz, A.; Bosisio, F. M.; Wauters, E.; Martinod, K.; Matthys, P.; Saeys, Y.; Garg, A. D.; Wauters, J.; De Smet, F.

TAO-kinase 3 governs the terminal differentiation of conventional dendritic cells

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2020-11-19

OAAI

Vanderkerken, Matthias; Maes, Bastiaan; Vandersarren, Lana; Toussaint, Wendy; Deswarte, Kim; Vanheerswynghels, Manon; Pouliot, Philippe; Martens, Liesbet; Van Gassen, Sofie; Arthur, Connie M.; Kirkling, Margaret E.; Reizis, Boris; Conrad, Daniel; Stowell, Sean; Hammad, Hamida; Lambrecht, Bart N.

The ORMDL3 asthma susceptibility gene regulates systemic ceramide levels without altering key asthma features in mice

JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

IF11.2

2019-12-01

OAAI

Debeuf, Nincy; Zhakupova, Assem; Steiner, Regula; Van Gassen, Sofie; Deswarte, Kim; Fayazpour, Farzaneh; Van Moorleghem, Justine; Vergote, Karl; Pavie, Benjamin; Lemeire, Kelly; Hammad, Hamida; Hornemann, Thorsten; Janssens, Sophie; Lambrecht, Bart N.

研究方向