Tim Downing - Publications, H-index & Citations

Tim Downing

pirbright institute

24H指数

165论文数

2.7K被引数

收录论文 27

发表时间

Three thousand five hundred years of sheeppox virus evolution inferred from archaeological and codicological genomes 基于考古和书籍学基因组推断的3500年羊痘病毒演化

Science Advances

IF12.5

2026-09-02

OAAI

Louis L’Hôte; Luisa Sacristán; Róisín Ferguson; Alex Siekmann; Leland Rogers; Barbara Richter; Herbert Weissenböck; Jenny Lorke; Lara Artemis; Élodie Lévêque; Richard Hark; Patricia Engel; Mary Teresa Josephine Webber; Madison Bennett; Kristine Rose-Beers; Emma Nichols; Marta Munoz Alegre; Max Ramsøe; Sarah Fiddyment; Laura C. Viñas-Caron; Dimitry V. Papin; Ian C. Light-Maka; Felix M. Key; Jonas Albarnaz; Tim Downing; Jonathan Pekar; Philippe Lemey; Daniel G. Bradley; Jiří Vnouček; Cheryl A. Makarewicz; Joanna Story; Matthew Collins; Matthew D. Teasdale; Annelise Binois-Roman; Sébastien Calvignac-Spencer; Kevin G. Daly

Using pangenome variation graphs to improve mutation detection in a large DNA virus 利用泛基因组变异图提高大型DNA病毒的突变检测

Microbial Genomics

IF4

2026-05-01

PREAI

Downing, Tim; Tennakoon, Chandana; Lasecka-Dykes, Lidia; Wright, Caroline

Sequencing and Analysis of Lumpy Skin Disease Virus Whole Genomes Reveals a New Viral Subgroup in West and Central Africa

VIRUSES-BASEL

IF3.5

2024-04-03

OAAI

Haga, Ismar R.; Shih, Barbara B.; Tore, Gessica; Polo, Noemi; Ribeca, Paolo; Gombo-Ochir, Delgerzul; Shura, Gansukh; Tserenchimed, Tsagaan; Enkhbold, Bazarragchaa; Purevtseren, Dulam; Ulziibat, Gerelmaa; Damdinjav, Batchuluun; Yimer, Lama; Bari, Fufa D.; Gizaw, Daniel; Adedeji, Adeyinka Jeremy; Atai, Rebecca Bitiyong; Adole, Jolly Amoche; Dogonyaro, Banenat Bajehson; Kumarawadu, Pradeep Lakpriya; Batten, Carrie; Corla, Amanda; Freimanis, Graham L.; Tennakoon, Chandana; Law, Andy; Lycett, Samantha; Downing, Tim; Beard, Philippa M.

A primer on correlation-based dimension reduction methods for multi-omics analysis

JOURNAL OF THE ROYAL SOCIETY INTERFACE

IF3.5

2023-10-11

OAAI

Downing, Tim; Angelopoulos, Nicos

Bacterial plasmid-associated and chromosomal proteins have fundamentally different properties in protein interaction networks

SCIENTIFIC REPORTS

IF3.9

2022-11-10

OAAI

Downing, Tim; Rahm, Alexander

Informing plasmid compatibility with bacterial hosts using protein-protein interaction data

GENOMICS

IF3

2022-11-01

OAAI

Downing, Tim; Lee, Min Jie; Archbold, Conor; McDonnell, Adam; Rahm, Alexander

CaV1.3 enhanced store operated calcium promotes resistance to androgen deprivation in prostate cancer

CELL CALCIUM

IF4

2022-05-01

OAAI

O'Reilly, Debbie; Downing, Tim; Kouba, Sana; Potier-Cartereau, Marie; McKenna, Declan J.; Vandier, Christophe; Buchanan, Paul J.

High genome plasticity and frequent genetic exchange in Leishmania tropica isolates from Afghanistan, Iran and Syria

PLOS NEGLECTED TROPICAL DISEASES

IF3.4

2021-12-30

OAAI

Glans, Hedvig; Lind Karlberg, Maria; Advani, Reza; Bradley, Maria; Alm, Erik; Andersson, Bjoern; Downing, Tim

Genomic surveillance of Escherichia coli ST131 identifies local expansion and serial replacement of subclones

MICROBIAL GENOMICS

IF4

2020-04-01

OAAI

Ludden, Catherine; Decano, Arun Gonzales; Jamrozy, Dorota; Pickard, Derek; Morris, Dearbhaile; Parkhill, Julian; Peacock, Sharon J.; Cormican, Martin; Downing, Tim

Global genome diversity of the Leishmania donovani complex 利什曼原虫donovani复合体的全球基因组多样性

ELIFE

IF0

2020-03-25

OAAI

Franssen, Susanne U.; Durrant, Caroline; Stark, Olivia; Moser, Bettina; Downing, Tim; Imamura, Hideo; Dujardin, Jean-Claude; Sanders, Mandy J.; Mauricio, Isabel; Miles, Michael A.; Schnur, Lionel F.; Jaffe, Charles L.; Nasereddin, Abedelmajeed; Schallig, Henk; Yeo, Melissa; Bhattacharyya, Tapan; Alam, Mohammad Zahangir; Berriman, Matthew; Wirth, Thierry; Schoenian, Gabriele; Cotton, James A.

Genomic and Metabolomic Polymorphism among Experimentally Selected Paromomycin-Resistant Leishmania donovani Strains

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

IF4.5

2019-12-20

OAAI

Shaw, C. D.; Imamura, H.; Downing, T.; Blackburn, G.; Westrop, G. D.; Cotton, J. A.; Berriman, M.; Sanders, M.; Rijal, S.; Coombs, G. H.; Dujardin, J. C.; Carter, K. C.

An Escherichia coli ST131 pangenome atlas reveals population structure and evolution across 4,071 isolates

SCIENTIFIC REPORTS

IF3.9

2019-11-22

OAAI

Decano, Arun Gonzales; Downing, Tim

Complete Assembly of Escherichia coli Sequence Type 131 Genomes Using Long Reads Demonstrates Antibiotic Resistance Gene Variation within Diverse Plasmid and Chromosomal Contexts

MSPHERE

IF3.1

2019-06-26

OAAI

Decano, Arun Gonzales; Ludden, Catherine; Feltwell, Theresa; Judge, Kim; Parkhill, Julian; Downing, Tim

Paternally Expressed Imprinted Genes under Positive Darwinian Selection in Arabidopsis thaliana

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2019-03-26

OAAI

Tuteja, Reetu; McKeown, Peter C.; Ryan, Pat; Morgan, Claire C.; Donoghue, Mark T. A.; Downing, Tim; O'Connell, Mary J.; Spillane, Charles

Development and Evaluation of a Novel Loop-Mediated Isothermal Amplification Assay for Diagnosis of Cutaneous and Visceral Leishmaniasis 用于诊断皮肤和内脏利什曼病的新型环介导等温扩增测定法的开发和评估

JOURNAL OF CLINICAL MICROBIOLOGY

IF5.4

2018-07-01

OAAI

Adams, Emily Rebecca; Schoone, Gerard; Versteeg, Inge; Adelaida Gomez, Maria; Diro, Ermias; Mori, Yasuyoshi; Perlee, Desiree; Downing, Tim; Saravia, Nancy; Assaye, Ashenafi; Hailu, Asrat; Albertini, Audrey; Ndung'u, Joseph Mathu; Schallig, Henk

Leishmania infections: Molecular targets and diagnosis 利什曼原虫感染: 分子靶点和诊断

MOLECULAR ASPECTS OF MEDICINE

IF10.3

2017-10-01

240

OAAI

Akhoundi, Mohammad; Downing, Tim; Votypka, Jan; Kuhls, Katrin; Lukes, Julius; Cannet, Arnaud; Ravel, Christophe; Marty, Pierre; Delaunay, Pascal; Kasbari, Mohamed; Granouillac, Bruno; Gradoni, Luigi; Sereno, Denis

Tandem Amplification of the Staphylococcal Cassette Chromosome mec Element Can Drive High-Level Methicillin Resistance in Methicillin-Resistant Staphylococcus aureus 葡萄球菌盒染色体mec元件的串联扩增可以驱动耐甲氧西林金黄色葡萄球菌的高水平耐甲氧西林

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

IF4.5

2017-09-01

OAAI

Gallagher, Laura A.; Coughlan, Simone; Black, Nikki S.; Lalor, Pierce; Waters, Elaine M.; Wee, Bryan; Watson, Mick; Downing, Tim; Fitzgerald, J. Ross; Fleming, Gerard T. A.; O'Gara, James P.

The genome of Leishmania adleri from a mammalian host highlights chromosome fission in Sauroleishmania

SCIENTIFIC REPORTS

IF3.9

2017-03-03

OAAI

Coughlan, Simone; Mulhair, Peter; Sanders, Mandy; Schonian, Gabriele; Cotton, James A.; Downing, Tim

Redeploying β-Lactam Antibiotics as a Novel Antivirulence Strategy for the Treatment of Methicillin-Resistant Staphylococcus aureus Infections

JOURNAL OF INFECTIOUS DISEASES

IF4.5

2016-11-14

OAAI

Waters, Elaine M.; Rudkin, Justine K.; Coughlan, Simone; Clair, Geremy C.; Adkins, Joshua N.; Gore, Suzanna; Xia, Guoqing; Black, Nikki S.; Downing, Tim; O'Neill, Eoghan; Kadioglu, Aras; O'Gara, James P.

A Polynucleotide Repeat Expansion Causing Temperature-Sensitivity Persists in Wild Irish Accessions of Arabidopsis thaliana

FRONTIERS IN PLANT SCIENCE

IF4.8

2016-08-31

OAAI

Tabib, Amanda; Vishwanathan, Sailaja; Seleznev, Andrei; McKeown, Peter C.; Downing, Tim; Dent, Craig; Sanchez-Bermejo, Eduardo; Colling, Luana; Spillane, Charles; Balasubramanian, Sureshkumar

研究方向