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Shinichi Sunagawa 封面图

Shinichi Sunagawa

eth zurich
H指数:89
被引数:5.4万

个人简介

Studies microbial communities living in many different environments, from the open ocean and coral reefs to the atmosphere. Interested in how these microbes interact, adapt, and influence the ecosystems they inhabit, bioinformatic tools and genomic data resources are built. Computational analyses are brought together with hands-on experimental work. By learning how microbial communities function and respond to change, support for ecosystem monitoring, conservation, and public outreach is aimed at.

教育背景

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工作经历

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荣誉奖项

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In silico typing maps the natural diversity of Escherichia coli transporter-dependent capsules

基于计算机模拟分型绘制大肠杆菌转运蛋白依赖性荚膜的天然多样性图谱

Nature Microbiology
IF19.4
2026-04-230
OAAI
Samuel Miravet-Verde; Elisabetta Cacace; Carine Roese Mores; Christoph Rutschmann; Chia-wei Lin; Hans-Joachim Ruscheweyh; Aline Cuénod; Elisa Cappio Barazzone; Enora Marrec; Kateryna Vershynina; Raffael Schumann; Dan J. Bower; Mario Schubert; Adrian Egli; Timm Fiebig; Emma Slack; Shinichi Sunagawa; Timothy G. Keys
Phage-steering permits antibody-mediated clearance of E. coli K1 from the gut

噬菌体转向允许抗体介导的大肠杆菌K1从肠道的清除

Nature Communications
IF15.7
2026-03-240
OAAI
Louise Larsson; Anouk Bertola; Nicolas Wenner; Jasmine Kaur; Sara Dion; Leonardo Lemos Rocha; Timothy Keys; Christoph Rutschmann; Kateryna Vershynina; Despoina Dimakou; Elisa Cappio Barazzone; Verena Lentsch; Niina Ruoho; Carine Roese Mores; Raffael Schumann; Shinichi Sunagawa; Erick Denamur; Emma Slack; Médéric Diard
Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity

珊瑚微生物组作为未知基因组和生物合成多样性的储库

Nature
IF48.5
2026-02-250
OAAI
Fabienne Wiederkehr; Lucas Paoli; Daniel Richter; Dora Racunica; Hans-Joachim Ruscheweyh; Martin Sperfeld; James O’Brien; Samuel Miravet-Verde; Alena B. Streiff; Jessica Ransome; Clara Chepkirui; Taylor Priest; Anna Sintsova; Guillem Salazar; Kalia S. I. Bistolas; Teresa Sawyer; Karine Labadie; Kim-Isabelle Mayer; Aude Perdereau; Maggie M. Reddy; Clémentine Moulin; Emilie Boissin; Guillaume Bourdin; Juliette Cailliau; Guillaume Iwankow; Julie Poulain; Sarah Romac; Serge Planes; Denis Allemand; Sylvain Agostini; Chris Bowler; Eric Douville; Didier Forcioli; Pierre E. Galand; Fabien Lombard; Pedro H. Oliveira; Olivier P. Thomas; Rebecca Vega Thurber; Romain Troublé; Christian R. Voolstra; Patrick Wincker; Maren Ziegler; Jörn Piel; Shinichi Sunagawa
Salmonella multimutants enable efficient identification of SPI-2 effector protein function in gut inflammation and systemic colonization

沙门氏菌多突变体能够高效鉴定肠道炎症和系统性定植中SPI-2效应蛋白的功能

Nature Communications
IF15.7
2025-11-060
OAAI
Joshua P. M. Newson; Flavia Gürtler; Pietro Piffaretti; Nicolò Barbieri; Annina Meyer; Anna Sintsova; Manja Barthel; Yves Steiger; Sarah C. McHugh; Ursina Enz; Neal M. Alto; Shinichi Sunagawa; Wolf-Dietrich Hardt
The Gfr Uptake System Provides a Context-Dependent Fitness Advantage to Salmonella Typhimurium SL1344 During the Initial Gut Colonization Phase

Gfr 吸收系统在沙门氏菌 Typhimurium SL1344 的初始肠道定植阶段提供了依赖环境背景的适应性优势。

Molecular Microbiology
IF2.6
2025-10-130
OAAI
Lea Fuchs; Cora Lisbeth Dieterich; Elena Melgarejo Ros; Philipp Keller; Anna Sintsova; Leanid Laganenka; Thomas A. Scott; Christopher Schubert; Shinichi Sunagawa; Julia A. Vorholt; Jörn Piel; Wolf-Dietrich Hardt; Bidong D. Nguyen
Sublethal systemic LPS in mice enables gut-luminal pathogens to bloom through oxygen species-mediated microbiota inhibition

亚致死剂量的系统性LPS在 mice 中能够通过氧物种介导的菌群抑制，使肠道腔内病原体大量繁殖。

NATURE COMMUNICATIONS
IF15.7
2025-03-201
OA
Kroon, Sanne; Malcic, Dejan; Weidert, Lena; Bircher, Lea; Boldt, Leonardo; Christen, Philipp; Kiefer, Patrick; Sintsova, Anna; Nguyen, Bidong D.; Barthel, Manja; Steiger, Yves; Clerc, Melanie; Herzog, Mathias K. -M.; Chen, Carmen; Gul, Ersin; Guery, Benoit; Slack, Emma; Sunagawa, Shinichi; Vorholt, Julia A.; Maier, Lisa; Lacroix, Christophe
Metagenomic study of lake microbial mats reveals protease-inhibiting antiviral peptides from a core microbiome member
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
2024-11-250
PRE
Padhi, Chandrashekhar; Field, Christopher M.; Forneris, Clarissa C.; Olszewski, Dominik; Fraley, Amy E.; Sandu, Ioana; Scott, Thomas A.; Farnung, Jakob; Ruscheweyh, Hans - Joachim; Panda, Ananta Narayan; Oxenius, Annette; Greber, Urs F.; Bode, Jeffrey W.; Sunagawa, Shinichi; Raina, Vishakha; Suar, Mrutyunjay; Piel, Joern

研究方向

Microbial Communitiesopen oceancoral reefsatmosphereecosystemsbioinformatic toolsgenomic data resourcescomputational analysesexperimental workecosystem monitoringconservationpublic outreach
P
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