Karsten Borgwardt - Publications, H-index & Citations

Karsten Borgwardt

max planck society

60H指数

267论文数

2.4W被引数

收录论文 41

发表时间

Early detection of ampicillin susceptibility in Enterococcus faecium with MALDI-TOF/MS and machine learning 利用MALDI-TOF/MS和机器学习对屎肠球菌进行氨苄西林敏感性早期检测

Journal of Global Antimicrobial Resistance

IF3.2

2026-04-01

OAAI

Pichl, Thomas; Miranda, Lucas; Warkotsch, Matthias T.; Wantia, Nina; Borgwardt, Karsten; Sattler, Janko

Automated Discovery of Reactive Events via Hypergraph Mining of Ab Initio Atomistic Simulations 通过超图挖掘自洽原子模拟实现反应事件的自动化发现

Journal of Chemical Theory and Computation

IF5.5

2026-02-12

OAAI

Alexandra Stan-Bernhardt; Paolo Pellizzoni; Karsten Borgwardt; Christian Ochsenfeld

Circulation of polyclonal OXA-244-producing Escherichia coli lineages in Jerusalem, Israel 以色列耶路撒冷地区多克隆OXA-244产生型大肠杆菌谱系的传播

JAC-ANTIMICROBIAL RESISTANCE

IF3.3

2025-12-01

OAAI

Sattler, Janko; Oster, Yonatan; Seth Smith, Helena M. B.; Gutlin, Yukino; Michael-Gayego, Ayelet; Reshef, Dan; Temper, Violeta; Borgwardt, Karsten; Egli, Adrian; Strahilevitz, Jacob; Moran-Gilad, Jacob

Conformal Prediction with Knowledge Graphs for Reliable Antimicrobial Resistance Detection with MALDI-TOF Mass Spectra Corvelo Benz, N.; Miranda, L.; Chen, D.; Sattler, J.; Borgwardt, K. 基于知识图谱的Conformal Prediction方法用于MALDI-TOF质谱可靠地检测抗微生物耐药性。J. Comput. Biol. 2025, 15578666251396558. [Google Scholar] [CrossRef]

JOURNAL OF COMPUTATIONAL BIOLOGY

IF1.6

2025-12-01

PREAI

Corvelo Benz, Nina; Miranda, Lucas; Chen, Dexiong; Sattler, Janko; Borgwardt, Karsten

Endowing protein language models with structural knowledge 为蛋白质语言模型赋予结构知识

BIOINFORMATICS

IF5.4

2025-11-01

OAAI

Hartout, Philip; Chen, Dexiong; Pellizzoni, Paolo; Oliver, Carlos; Borgwardt, Karsten

Predicting sequence-specific amplification efficiency in multi-template PCR with deep learning 基于深度学习预测多模板PCR的序列特异性扩增效率

Nature Communications

IF15.7

2025-10-16

OAAI

Andreas L. Gimpel; Bowen Fan; Dexiong Chen; Laetitia O. D. Wölfle; Max Horn; Laetitia Meng-Papaxanthos; Philipp L. Antkowiak; Wendelin J. Stark; Beat Christen; Karsten Borgwardt; Robert N. Grass

ESCMID workshop: Artificial Intelligence and Machine Learning in Medical Microbiology Diagnostics ESCMID研讨会：人工智能和机器学习在医学微生物学诊断中的应用

Microbes and Infection

IF2.7

2025-09-05

OAAI

Mariella Greutmann; Karsten Borgwardt; Sarah Brüningk; Fabian Franzeck; Christian G. Giske; Anna G. Green; Alejandro Guerrero-López; Margaret Ip; Catherine Jutzeler; Andre Kahles; Michael Krauthammer; Nenad Macesic; Benjamin McFadden; Eline Meijer; Nathan Moore; Jacob Moran-Gilad; Imane Lboukili; Oliver Nolte; Robin Patel; Gerold Schneider; Markus A. Seeger; Tavpritesh Sethi; Robert L. Skov; Chang Ho Yoon; Belén Rodríguez-Sánchez; Adrian Egli

ISMB/ECCB 2025 Proceedings

BIOINFORMATICS

IF5.4

2025-07-01

OAAI

Borgwardt, Karsten; Milenkovic, Tijana

Enhancing the diagnosis of functionally relevant coronary artery disease with machine learning

NATURE COMMUNICATIONS

IF15.7

2024-06-12

OAAI

Bock, Christian; Walter, Joan Elias; Rieck, Bastian; Strebel, Ivo; Rumora, Klara; Schaefer, Ibrahim; Zellweger, Michael J.; Borgwardt, Karsten; Mueller, Christian

DeePhys: A machine learning-assisted platform for electrophysiological phenotyping of human neuronal networks

STEM CELL REPORTS

IF5.1

2024-02-01

OAAI

Hornauer, Philipp; Prack, Gustavo; Anastasi, Nadia; Ronchi, Silvia; Kim, Taehoon; Donner, Christian; Fiscella, Michele; Borgwardt, Karsten; Jagasia, Ravi; Taylor, Verdon; Roqueiro, Damian; Hierlemann, Andreas; Schroter, Manuel

Predicting sepsis using deep learning across international sites: a and validation 跨国际站点使用深度学习预测脓毒症: a和验证

ECLINICALMEDICINE

IF10

2023-08-01

OAAI

Moor, Michael; Bennett, Nicolas; Plecko, Drago; Horn, Max; Rieck, Bastian; Meinshausen, Nicolai; Buhlmann, Peter; Borgwardt, Karsten

Determinants of SARS-CoV-2 transmission to guide vaccination strategy in an urban area

VIRUS EVOLUTION

IF4

2022-03-17

OAAI

Bruningk, Sarah C.; Klatt, Juliane; Stange, Madlen; Mari, Alfredo; Brunner, Myrta; Roloff, Tim-Christoph; Seth-Smith, Helena M. B.; Schweitzer, Michael; Leuzinger, Karoline; Sogaard, Kirstine K.; Torres, Diana Albertos; Gensch, Alexander; Schlotterbeck, Ann-Kathrin; Nickel, Christian H.; Ritz, Nicole; Heininger, Ulrich; Bielicki, Julia; Rentsch, Katharina; Fuchs, Simon; Bingisser, Roland; Siegemund, Martin; Pargger, Hans; Ciardo, Diana; Dubuis, Olivier; Buser, Andreas; Tschudin-Sutter, Sarah; Battegay, Manuel; Schneider-Sliwa, Rita; Borgwardt, Karsten M.; Hirsch, Hans H.; Egli, Adrian

Direct antimicrobial resistance prediction from clinical MALDI-TOF mass spectra using machine learning

NATURE MEDICINE

IF50

2022-01-10

OAAI

Weis, Caroline; Cuenod, Aline; Rieck, Bastian; Llinares-Lopez, Felipe; Dubuis, Olivier; Graf, Susanne; Lang, Claudia; Oberle, Michael; Brackmann, Maximilian; Sogaard, Kirstine K.; Osthoff, Michael; Borgwardt, Karsten; Egli, Adrian

RNA atlas of human bacterial pathogens uncovers stress dynamics linked to infection

NATURE COMMUNICATIONS

IF15.7

2021-06-02

OAAI

Avican, Kemal; Aldandooh, Jehad; Togninalli, Matteo; Mahmud, A. K. M. Firoj; Tang, Jing; Borgwardt, Karsten M.; Rhen, Mikael; Fallman, Maria

Early Prediction of Sepsis in the ICU Using Machine Learning: A Systematic Review 使用机器学习早期预测ICU脓毒症的系统评价

FRONTIERS IN MEDICINE

IF3

2021-05-28

OAAI

Moor, Michael; Rieck, Bastian; Horn, Max; Jutzeler, Catherine R.; Borgwardt, Karsten

Biological network analysis with deep learning

BRIEFINGS IN BIOINFORMATICS

IF7.7

2020-11-10

123

OAAI

Muzio, Giulia; O'Bray, Leslie; Borgwardt, Karsten

Machine learning for microbial identification and antimicrobial susceptibility testing on MALDI-TOF mass spectra: a systematic review 机器学习用于maldi-tof质谱微生物鉴定和药敏试验的系统评价

CLINICAL MICROBIOLOGY AND INFECTION

IF8.5

2020-10-01

101

OAAI

Weis, C., V; Jutzeler, C. R.; Borgwardt, K.

Comorbidities, clinical signs and symptoms, laboratory findings, imaging features, treatment strategies, and outcomes in adult and pediatric patients with COVID-19: A systematic review and meta-analysis

TRAVEL MEDICINE AND INFECTIOUS DISEASE

IF4.7

2020-09-01

110

OAAI

Jutzeler, Catherine R.; Bourguignon, Lucie; Weis, Caroline, V; Tong, Bobo; Wong, Cyrus; Rieck, Bastian; Pargger, Hans; Tschudin-Sutter, Sarah; Egli, Adrian; Borgwardt, Karsten; Walter, Matthias

Large-scale DNA-based phenotypic recording and deep learning enable highly accurate sequence-function mapping

NATURE COMMUNICATIONS

IF15.7

2020-07-15

OAAI

Hoellerer, Simon; Papaxanthos, Laetitia; Gumpinger, Anja Cathrin; Fischer, Katrin; Beisel, Christian; Borgwardt, Karsten; Benenson, Yaakov; Jeschek, Markus

Early prediction of circulatory failure in the intensive care unit using machine learning

NATURE MEDICINE

IF50

2020-03-09

227

OAAI

Hyland, Stephanie L.; Faltys, Martin; Huser, Matthias; Lyu, Xinrui; Gumbsch, Thomas; Esteban, Cristobal; Bock, Christian; Horn, Max; Moor, Michael; Rieck, Bastian; Zimmermann, Marc; Bodenham, Dean; Borgwardt, Karsten; Ratsch, Gunnar; Merz, Tobias M.

研究方向