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张

张学工 (Xuegong Zhang)

Tsinghua University

54H指数
368论文数
1.9W被引数
收录论文 107
发表时间
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A multi-modal diffusion model with dual-cross-attention for multi-omics data generation and translation多模态扩散模型与双交叉注意力用于多组学数据生成与翻译
errNature Communications
IF15.7
err2026-04-14
err0
errOAAI
errErpai Luo; Lei Wei; Minsheng Hao; Xuegong Zhang; Qiao Liu
err分享
err收藏
hECA v2.0: an AI-ready ensemble cell atlas of single-cell RNA and ATAC sequencing datahECA v2.0：一个适用于AI的整合单细胞RNA和ATAC测序数据的集合细胞图谱
errScientific Data
IF6.9
err2025-12-15
err0
errOAAI
errXi Xi; Yixin Chen; Xinze Wu; Minsheng Hao; Jiaqi Li; Haiyang Bian; Qiuchen Meng; Fanhong Li; Chen Li; Chuxi Xiao; Xiaomin Dong; Renke You; Yifan Xiong; Peng Yang; Zijing Gao; Xuejian Cui; Yan Pan; Zhen Li; Wenrui Li; Zhuofeng Li; Xiaoyang Chen; Yanfei Cui; Hairong Lv; Rui Jiang; Lei Wei; Xuegong Zhang
err分享
err收藏
ERNIE-RNA: an RNA language model with structure-enhanced representationsERNIE-RNA：一种具有结构增强表示的RNA语言模型
errNature Communications
IF15.7
err2025-11-18
err0
errOAAI
errWeijie Yin; Zhaoyu Zhang; Shuo Zhang; Liang He; Ruiyang Zhang; Rui Jiang; Gan Liu; Jingyi Wang; Xuegong Zhang; Tao Qin; Zhen Xie
err分享
err收藏
A unified single-cell atlas of human lung provides insights into pulmonary diseases一份统一的人类肺脏单细胞图谱为肺部疾病提供了见解
erreBioMedicine
IF10.8
err2025-11-13
err0
errOAAI
errFanjie Wu; Wenhao Cai; Hai Tang; Shikang Zheng; Haiyue Zhang; Yixin Chen; Yutong Han; Dingli Zhou; Ruihan Wang; Mingli Ye; Renke You; Amin Chen; Jiaqi Li; Xuegong Zhang; Weizhong Li
err分享
err收藏
Multitemporal single-cell profiling uncovers alveolar IL1βhi neutrophils: A significant indicator of CARDS progression多时相单细胞分析揭示肺泡IL1βhi中性粒细胞：CARDS进展的重要指标
errClinical and Translational Medicine
IF6.8
err2025-09-25
err0
errOAAI
errYingying Yang; Haochen Li; Peng Liu; Jinmeng Jia; Lei Wei; Xiangyu Chen; Ziqi Tan; Hantian Li; Qianlin Wang; Siyi Yuan; Liangyu Mi; Yuechuan Xue; Yi Chi; Shuaishuai Yang; Yanjie Zhao; Huaiwu He; Xuegong Zhang; Longxiang Su; Yun Long
err分享
err收藏
Elevated Dickkopf 3 Promotes Abdominal Aortic Aneurysm Formation via Modulated Phenotype Switch of Vascular Smooth Muscle CellsDickkopf 3升高通过调节血管平滑肌细胞表型转换促进腹主动脉瘤形成
errResearch
IF10.7
err2025-09-11
err0
errOAAI
errXuejie Cao; Jinmeng Jia; Qiuyue Gao; Jiaping Tao; Ming Wei; Yanting Song; Hong Wu; Shiyu Jiao; Xinxin Zhu; Xuegong Zhang; Yi Fu; Yuan Wang; Jie Du; Qingbo Xu; Aijuan Qu; Baoqi Yu
err分享
err收藏
Computational methods and data resources for predicting tumor neoantigens赵X, 魏L, 张X. 预测肿瘤新抗原的计算方法与数据资源. Brief Bioinform. (2025) 26(4):bbaf302. doi: 10.1093/bib/bbaf302
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2025-07-01
err3
PREAI
errZhao, Xiaofei; Wei, Lei; Zhang, Xuegong
err分享
err收藏
Label Informed Contrastive Pretraining for Node Importance Estimation on Knowledge Graphs知识图上节点重要性估计的标签通知对比预训练
errIEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS
IF8.9
err2025-03-01
err0
errOAAI
errZhang, Tianyu; Hou, Chengbin; Jiang, Rui; Zhang, Xuegong; Zhou, Chenghu; Tang, Ke; Lv, Hairong
err分享
err收藏
A phenotype-based AI pipeline outperforms human experts in differentially diagnosing rare diseases using EHRs基于表型的AI流程在利用EHRs对罕见病进行鉴别诊断方面优于人类专家
errNPJ DIGITAL MEDICINE
IF15.1
err2025-01-28
err1
errOAAI
errMao, Xiaohao; Huang, Yu; Jin, Ye; Wang, Lun; Chen, Xuanzhong; Liu, Honghong; Yang, Xinglin; Xu, Haopeng; Luan, Xiaodong; Xiao, Ying; Feng, Siqin; Zhu, Jiahao; Zhang, Xuegong; Jiang, Rui; Chen, Ting
err分享
err收藏
Weakly Supervised Causal Discovery Based on Fuzzy Knowledge and Complex Data Complementarity
errIEEE TRANSACTIONS ON FUZZY SYSTEMS
IF11.9
err2024-12-01
err0
PREAI
errLi, Wenrui; Zhang, Wei; Zhang, Qinghao; Zhang, Xuegong; Wang, Xiaowo
err分享
err收藏
Dynamic regulation of innate lymphoid cell development during ontogeny
errMUCOSAL IMMUNOLOGY
IF7.6
err2024-12-01
err1
errOAAI
errWu, Tao; Chen, Sijie; Zhu, Xinyi; Ma, Jie; Luo, Maocai; Wang, Yuanhao; Tian, Yujie; Sun, Qingqing; Guo, Xiaohuan; Zhang, Jianhong; Zhang, Xuegong; Zhu, Yunping; Wu, Li
err分享
err收藏
scStateDynamics: deciphering the drug-responsive tumor cell state dynamics by modeling single-cell level expression changes
errGENOME BIOLOGY
IF9.4
err2024-11-21
err0
errOAAI
errGuo, Wenbo; Li, Xinqi; Wang, Dongfang; Yan, Nan; Hu, Qifan; Yang, Fan; Zhang, Xuegong; Yao, Jianhua; Gu, Jin
err分享
err收藏
scTML: a pan-cancer single-cell landscape of multiple mutation types
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-10-18
err0
errOAAI
errLi, Haochen; Ma, Tianxing; Zhao, Zetong; Chen, Yixin; Xi, Xi; Zhao, Xiaofei; Zhou, Xiaoxiang; Gao, Yibo; Wei, Lei; Zhang, Xuegong
err分享
err收藏
General-purpose pre-trained large cellular models for single-cell transcriptomics
errNATIONAL SCIENCE REVIEW
IF17.1
err2024-09-25
err1
errOAAI
errBian, Haiyang; Chen, Yixin; Luo, Erpai; Wu, Xinze; Hao, Minsheng; Wei, Lei; Zhang, Xuegong
err分享
err收藏
Building a learnable universal coordinate system for single-cell atlas with a joint-VAE model用联合VAE模型为单细胞图谱建立可学习的通用坐标系
errCOMMUNICATIONS BIOLOGY
IF5.1
err2024-08-12
err0
errOAAI
errGao, Haoxiang; Hua, Kui; Wu, Xinze; Wei, Lei; Chen, Sijie; Yin, Qijin; Jiang, Rui; Zhang, Xuegong
err分享
err收藏
A brain cell atlas integrating single-cell transcriptomes across human brain regions整合人脑区域单细胞转录组的脑细胞图谱
errNATURE MEDICINE
IF50
err2024-08-02
err3
errOAAI
errChen, Xinyue; Huang, Yin; Huang, Liangfeng; Huang, Ziliang; Hao, Zhao-Zhe; Xu, Lahong; Xu, Nana; Li, Zhi; Mou, Yonggao; Ye, Mingli; You, Renke; Zhang, Xuegong; Liu, Sheng; Miao, Zhichao
err分享
err收藏
A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular marker discovery of gliomas一种基于变压器的弱监督计算病理学方法，用于神经胶质瘤的临床级诊断和分子标记物发现
errNATURE MACHINE INTELLIGENCE
IF23.9
err2024-07-18
err0
PREAI
errJiang, Rui; Yin, Xiaoxu; Yang, Pengshuai; Cheng, Lingchao; Hu, Juan; Yang, Jiao; Wang, Ying; Fu, Xiaodan; Shang, Li; Li, Liling; Lin, Wei; Zhou, Huan; Chen, Fufeng; Zhang, Xuegong; Hu, Zhongliang; Lv, Hairong
err分享
err收藏
Reciprocal regulation of T follicular helper cells and dendritic cells drives colitis development
errNATURE IMMUNOLOGY
IF27.6
err2024-06-28
err1
errOAAI
errBai, Xue; Chen, Sijie; Chi, Xinxin; Xie, Bowen; Guo, Xinyi; Feng, Han; Wei, Peng; Zhang, Di; Xie, Shan; Xie, Tian; Chen, Yongzhen; Gou, Mengting; Qiao, Qin; Liu, Xinwei; Jin, Wei; Xu, Wei; Zhao, Zixuan; Xing, Qi; Wang, Xiaohu; Zhang, Xuegong; Dong, Chen
err分享
err收藏
Large-scale foundation model on single-cell transcriptomics单细胞转录组学的大规模基础模型
errNATURE METHODS
IF32.1
err2024-06-06
err27
PREAI
errHao, Minsheng; Gong, Jing; Zeng, Xin; Liu, Chiming; Guo, Yucheng; Cheng, Xingyi; Wang, Taifeng; Ma, Jianzhu; Zhang, Xuegong; Song, Le
err分享
err收藏
Single-cell profiling highlight pathogenic myeloid features in house dust mite-induced murine model of airway inflammation
errALLERGY
IF12
err2024-05-13
err0
PREAI
errLiu, Jiachen; Lv, Jiaoyan; Chen, Sijie; Ma, Jie; Yao, Jiaying; Yuan, Zan; Yang, Chunyuan; Li, Xiao; Zhang, Xuegong; Zhu, Yunping; Zhang, Jianhong; Wu, Li
err分享
err收藏

研究方向

生命基础模型与数基生命系统机器学习与生物医学大数据分析单细胞生物信息学、人体细胞图谱与数字孪生
合作学者
合作期刊
L
Luigi Ferrucci
H 指数: 237 · 论文数: 2.6K
A
André G. Uitterlinden
H 指数: 234 · 论文数: 2.0K
N
Nicholas G. Martin
H 指数: 221 · 论文数: 2.8K
T
Tien Yin Wong
H 指数: 208 · 论文数: 3.1K
B
Bruce M. Psaty
H 指数: 207 · 论文数: 1.8K
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