Eduan Wilkinson - Publications, H-index & Citations

Eduan Wilkinson

school for data science and computational thinking

39H指数

151论文数

1.2W被引数

收录论文 42

发表时间

Dietary ecology structures gut microbiome assembly in sympatric wild mammals from Kruger National Park, South Africa 饮食生态结构塑造了南非克鲁格国家公园同域野生哺乳动物肠道微生物组的组装

Animal Microbiome

IF4.4

2026-09-18

OAAI

Sheylle Green; Thanaporn Thongthum; Daniele Pietrucci; Lucious Chabuka; Stepfan de Villiers; Leanna Freese; Maclean Bassett; Lavanya Singh; Talhah Loonat; Derek Tshiabuila; Marco Salemi; Giovanni Chillemi; Cheryl Baxter; Tulio de Oliveira; Michele Miller; Peter Buss; Eduan Wilkinson; Carla Mavian

CholeraSeq: a comprehensive genomic pipeline for cholera surveillance and near real-time outbreak investigation

BIOINFORMATICS

IF5.4

2026-01-01

PREAI

Tagliamonte, Massimiliano S.; Sharma, Abhinav; Riva, Alberto; Moir, Monika; Salemi, Marco; Baxter, Cheryl; de Oliveira, Tulio; Mavian, Carla N.; Wilkinson, Eduan

Genomic analysis and antimicrobial resistance of Vibrio cholerae isolated during Zambia's 2023 cholera epidemic 2023年赞比亚霍乱疫情期间分离的霍乱弧菌基因组分析与抗生素耐药性

MICROBIAL GENOMICS

IF4

2025-12-01

PREAI

Ng'ombe, Harriet; Luchen, Charlie C.; Bote, Lia; Kasonde, Mpanga; Musonda, Kunda; Mwape, Kapambwe K.; Kuntawala, H.; Silwamba, Suwilanji; Chibuye, Mwelwa; Chibesa, Kennedy; Mbewe, Nyuma; Bosomprah, Samuel; Khan, Wesaal; Liebenberg, Lenine; de Oliveira, Tulio; Wilkinson, Eduan; Dorman, Matthew J.; Coghlan, Avril; Simuyandi, Michelo; Chilengi, Roma; Chisenga, Caroline; Thomson, Nicholas R.

Neutralizing and binding antibodies are a correlate of risk of COVID-19 in the CoVPN 3008 study in people with HIV 中和抗体和结合抗体是CoVPN 3008研究中HIV感染者COVID-19风险的相关因素。

Nature Communications

IF15.7

2025-10-06

OAAI

Nonhlanhla N. Mkhize; Bo Zhang; Caroline Brackett; Peter James Elyanu; Asa Tapley; Sufia Dadabhai; Jiani Hu; Bich T. N. Do; Daniel J. Schuster; Jack Heptinstall; Sheetal Sawant; Kelly Seaton; Marcella Sarzotti-Kelsoe; Aaron Hudson; Yutong Jin; Sinethemba Bhebhe; Haajira Kaldine; Prudence Kgagudi; Tandile Modise; Nyaradzo M. Mgodi; Jessica Andriesen; April K. Randhawa; Leigh H. Fisher; Jia Jin Kee; Craig A. Magaret; James Peng; Avi Kenny; Lindsay N. Carpp; Zhe Chen; Siyu Heng; Manuel Villaran; Azwidihwi Takalani; Bert Le Roux; Eduan Wilkinson; Jackline Odhiambo; Parth Shah; Laura Polakowski; Margaret Yacovone; Taraz Samandari; Zvavahera Chirenje; Joseph Makhema; Ethel Kamuti; Katanekwa Njekwa; Harriet Nuwagaba-Biribonwoha; Allan Baguma; Sharlaa Badal-Faesen; William Brumskine; Soritha Coetzer; Rodney Dawson; Sinead Delany-Moretlwe; Andreas Henri Diacon; Samantha Fry; Katherine Gill; Anda Madikida; Zaheer Ahmed Ebrahim Hoosain; Mina C. Hosseinipour; Mubiana Inambao; Craig Innes; Steve Innes; Dishiki Kalonji; Humphrey Mwape; Priya Kassim; Melvin C. Kamanga; William Kilembe; Fatima Laher; Mookho Malahleha; Vongane Louisa Maluleke; Grace Mboya; Philister Adhiambo Madiega; Kirsten McHarry; Essack Mitha; Yajna Duki; Pamela Mda; Moroesi Moerane; Tumelo Moloantoa; Simpson Nuwamanya; Sharana Mahomed; Vimla Naicker; Anusha Nana; Annet Nanvubya; Barbarah Kawoozo; Maphoshane Nchabeleng; Walter Otieno; Elsje Louise Potgieter; Disebo Potloane; Zelda Punt; Jamil Said; Yashna Singh; Sheetal Kassim; Dorothie van der Vendt; Mohammed Siddique Tayob; Yacoob Vahed; Deo Ogema Wabwire; James G. Kublin; Linda-Gail Bekker; Lawrence Corey; Glenda E. Gray; Yunda Huang; Philip Kotze; Nigel Garrett; John Hural; Guido Ferrari; Erica Andersen-Nissen; David Montefiori; Penny L. Moore; M. Juliana McElrath; Georgia D. Tomaras; Peter B. Gilbert

Identifying genomic surveillance gaps in Africa for the global public health response to West Nile virus: a systematic review 识别非洲西尼罗病毒的基因组监测缺口：一项系统综述

lancet microbe

IF0

2025-07-24

OAAI

Monika Moir; Nikita Sitharam; Laura Marije Hofstra; Graeme Dor; Gaspary Mwanyika; Yajna Ramphal; Martina L Reichmuth; James Emmanuel San; Robert Gifford; Eduan Wilkinson; Derek Tshiabuila; Wolfgang Preiser; Abla Ahouefa Konou; Molalegne Bitew; Anyebe Bernard Onoja; Giacomo Maria Paganotti; Adugna Abera; James Ayei Maror; John Kayiwa; Sara Abuelmaali; Eddy Kinganda Lusamaki; Marietjie Venter; Felicity Burt; Cheryl Baxter; Richard Lessells; Tulio de Oliveira; Houriiyah Tegally

Unveiling novel features and phylogenomic assessment of indigenous Priestia megaterium AB-S79 using comparative genomics 使用比较基因组学揭示土著巨大Priestia megaterium AB-S79的新特征和系统发育评估

MICROBIOLOGY SPECTRUM

IF3.8

2025-02-19

OAAI

Adeniji, Adetomiwa Ayodele; Chukwuneme, Chinenyenwa Fortune; Conceicao, Emilyn Costa; Ayangbenro, Ayansina Segun; Wilkinson, Eduan; Maasdorp, Elizna; de Oliveira, Tulio; Babalola, Olubukola Oluranti

Emergence of the BA.2.87.1 lineage of SARS-CoV-2 in South Africa, a highly diverged BA.2-related lineage 南非出现SARS-CoV-2的BA.2.87.1谱系，这是一个高度分化的与BA.2相关的谱系

VIRUS EVOLUTION

IF4

2025-01-01

PREAI

Kekana, Dikeledi; Ntozini, Buhle; Hisner, Ryan; Yousif, Mukhlid; Ntuli, Phindile; Ndlovu, Nkosenhle; McCarthy, Kerrigan; Mnguni, Anele; Mahlangu, Boitshoko; Nzimande, Ayanda; Stock, Nadine; Tegally, Houriiyah; Davis, Mary-Ann; Moir, Monika; Wilkinson, Eduan; Baxter, Cheryl; Bhiman, Jinal; Cohen, Cheryl; Walaza, Sibongile; Von Gottberg, Anne; De Oliveira, Tulio; Wolter, Nicole; Martin, Darren

Emergence of Omicron FN.1 a descendent of BQ.1.1 in Botswana

VIRUS EVOLUTION

IF4

2024-11-22

OAAI

Choga, Wonderful T.; Gustani-Buss, Emanuele; Tegally, Houriiyah; Maruapula, Dorcas; Yu, Xiaoyu; Moir, Monika; Zuze, Boitumelo J. L.; James, San Emmanuel; Ndlovu, Nokuthula S.; Seru, Kedumetse; Motshosi, Patience; Blenkinsop, Alexandra; Gobe, Irene; Baxter, Cheryl; Manasa, Justen; Lockman, Shahin; Shapiro, Roger; Makhema, Joseph; Wilkinson, Eduan; Blackard, Jason T.; Lemey, Phillipe; Lessells, Richard J.; Martin, Darren P.; de Oliveira, Tulio; Gaseitsiwe, Simani; Moyo, Sikhulile

A phylogenetic assessment of HIV-1 transmission trends among people who inject drugs from Coastal and Nairobi, Kenya

VIRUS EVOLUTION

IF4

2024-11-11

OAAI

Kingston, Hanley; Nduva, George; Chohan, Bhavna H.; Mbogo, Loice; Monroe-Wise, Aliza; Sambai, Betsy; Guthrie, Brandon L.; Wilkinson, Eduan; Giandhari, Jennifer; Masyuko, Sarah; Sinkele, William; de Oliveria, Tulio; Bukusi, David; Scott, John; Farquhar, Carey; Herbeck, Joshua T.

Impacts of climate change-related human migration on infectious diseases 气候变化相关人口迁移对传染病的影响

NATURE CLIMATE CHANGE

IF27.1

2024-07-30

OAAI

Tsui, Joseph L. -H.; Pena, Rosario Evans; Moir, Monika; Inward, Rhys P. D.; Wilkinson, Eduan; San, James Emmanuel; Poongavanan, Jenicca; Bajaj, Sumali; Gutierrez, Bernardo; Dasgupta, Abhishek; de Oliveira, Tulio; Kraemer, Moritz U. G.; Tegally, Houriiyah; Sambaturu, Prathyush

HIV-1 pretreatment and acquired antiretroviral drug resistance before tenofovir/ /lamivudine /dolutegravir (TLD) roll-out in Mozambique

BMC INFECTIOUS DISEASES

IF3

2024-07-29

OAAI

Ismael, Nalia; Gemusse, Hernane; Mahumane, Isabel; Laurindo, Osvaldo; Magul, Cacildo; Baxter, Cheryl; Wilkinson, Eduan; Hofstra, L. Marije; Wagar, Nick; Bila, Dulce; Mabunda, Nedio; da Silva, Juliana; de Oliveira, Tulio; Raizes, Elliot; Preiser, Wolfgang; Manuel, Pedro; Ramos, Artur; Vubil, Adolfo

Understanding the Transmission Dynamics of the Chikungunya Virus in Africa 了解非洲基孔肯雅病毒的传播动态

PATHOGENS

IF3.3

2024-07-22

OAAI

Ramphal, Yajna; Tegally, Houriiyah; San, James Emmanuel; Reichmuth, Martina Larissa; Hofstra, Marije; Wilkinson, Eduan; Baxter, Cheryl; de Oliveira, Tulio; Moir, Monika

Insights into SARS-CoV-2 in Angola during the COVID-19 peak: Molecular epidemiology and genome surveillance 新型冠状病毒肺炎高峰期间安哥拉SARS-CoV-2的见解: 分子流行病学和基因组监测

INFLUENZA AND OTHER RESPIRATORY VIRUSES

IF4.2

2023-09-22

OAAI

Francisco, Ngiambudulu M.; van Wyk, Stephanie; Moir, Monika; San, James Emmanuel; Sebastiao, Cruz S.; Tegally, Houriiyah; Xavier, Joicymara; Maharaj, Akhil; Neto, Zoraima; Afonso, Pedro; Jandondo, Domingos; Paixao, Joana; Miranda, Julio; David, Kumbelembe; Ingles, Luzia; Pereira, Amilton; Paulo, Agostinho; Carralero, Raisa Rivas; Freitas, Helga Reis; Mufinda, Franco; Lutucuta, Silvia; Ghafari, Mahan; Giovanetti, Marta; Giandhari, Jennifer; Pillay, Sureshnee; Naidoo, Yeshnee; Singh, Lavanya; Tshiabuila, Derek; Martin, Darren Patrick; Chabuka, Lucious; Choga, Wonderful; Wanjohi, Dorcas; Mwangi, Sarah; Pillay, Yusasha; Kebede, Yenew; Shumba, Edwin; Ondoa, Pascale; Baxter, Cheryl; Wilkinson, Eduan; Tessema, Sofonias Kifle; Katzourakis, Aris; Lessells, Richard; de Oliveira, Tulio; Morais, Joana

Molecular Epidemiology of SARS-CoV-2 during Five COVID-19 Waves and the Significance of Low-Frequency Lineages (vol 15, 1194, 2023)五个新型冠状病毒肺炎波过程中SARS-CoV-2的分子流行病学和低频谱系的意义 (第15卷，1194，2023)

VIRUSES-BASEL

IF3.5

2023-07-04

OAAI

Subramoney, Kathleen; Mtileni, Nkhensani; Giandhari, Jennifer; Naidoo, Yeshnee; Ramphal, Yajna; Pillay, Sureshnee; Ramphal, Upasana; Maharaj, Akhil; Tshiabuila, Derek; Tegally, Houriiyah; Wilkinson, Eduan; de Oliveira, Tulio; Fielding, Burtram C.; Treurnicht, Florette K.

Molecular Epidemiology of SARS-CoV-2 during Five COVID-19 Waves and the Significance of Low-Frequency Lineages 五个新型冠状病毒肺炎波期间SARS-CoV-2的分子流行病学和低频谱系的意义

VIRUSES-BASEL

IF3.5

2023-05-18

OAAI

Reply to Molldrem 回复Molldrem

CLINICAL INFECTIOUS DISEASES

IF7.3

2023-01-31

PREAI

Maponga, Tongai G.; Jeffries, Montenique; Tegally, Houriiyah; Sutherland, Andrew; Wilkinson, Eduan; Lessells, Richard J.; Msomi, Nokukhanya; van Zyl, Gert; de Oliveira, Tulio; Preiser, Wolfgang

Molecular Epidemiology and Trends in HIV-1 Transmitted Drug Resistance in Mozambique 1999-2018

VIRUSES-BASEL

IF3.5

2022-09-09

OAAI

Ismael, Nalia; Wilkinson, Eduan; Mahumane, Isabel; Gemusse, Hernane; Giandhari, Jennifer; Bauhofer, Adilson; Vubil, Adolfo; Mambo, Pirolita; Singh, Lavanya; Mabunda, Nedio; Bila, Dulce; Engelbrecht, Susan; Gudo, Eduardo; Lessells, Richard; de Oliveira, Tulio

SARS-CoV-2 Genetic Diversity and Lineage Dynamics in Egypt during the First 18 Months of the Pandemic

VIRUSES-BASEL

IF3.5

2022-08-25

OAAI

Roshdy, Wael H.; Khalifa, Mohamed K.; San, James Emmanuel; Tegally, Houriiyah; Wilkinson, Eduan; Showky, Shymaa; Martin, Darren Patrick; Moir, Monika; Naguib, Amel; Elguindy, Nancy; Gomaa, Mokhtar R.; Fahim, Manal; Abu Elsood, Hanaa; Mohsen, Amira; Galal, Ramy; Hassany, Mohamed; Lessells, Richard J.; Al-Karmalawy, Ahmed A.; EL-Shesheny, Rabeh; Kandeil, Ahmed M.; Ali, Mohamed A.; de Oliveira, Tulio

Persistent Severe Acute Respiratory Syndrome Coronavirus 2 Infection With accumulation of mutations in a patient with poorly controlled Human Immunodeficiency Virus infection

CLINICAL INFECTIOUS DISEASES

IF7.3

2022-08-01

OAAI

Maponga, Tongai G.; Jeffries, Montenique; Tegally, Houriiyah; Sutherland, Andrew; Wilkinson, Eduan; Lessells, Richard J.; Msomi, Nokukhanya; van Zyl, Gert; de Oliveira, Tulio; Preiser, Wolfgang

Tracking the 2022 monkeypox outbreak with epidemiological data in real-time

LANCET INFECTIOUS DISEASES

IF31

2022-07-01

OAAI

Kraemer, Moritz U. G.; Tegally, Houriiyah; Pigott, David M.; Dasgupta, Abhishek; Sheldon, James; Wilkinson, Eduan; Schultheiss, Marinanicole; Han, Aimee; Oglia, Mark; Marks, Spencer; Kanner, Joshua; O'Brien, Katelynn; Dandamudi, Sudheer; Rader, Benjamin; Sewalk, Kara; Bento, Ana, I; Scarpino, Samuel, V; de Oliveira, Tulio; Bogoch, Isaac I.; Katz, Rebecca; Brownstein, John S.

研究方向