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The genetic architecture of HIV-1 virulence HIV-1毒力的遗传架构 Blanquart, Francois; Wymant, Chris; Hall, Matthew; Power, Robert; Golubchik, Tanya; Gall, Astrid; De Cesare, Mariateresa; Macintyre-Cockett, George; Bakker, Margreet; Bezemer, Daniela; Gabrielaite, Migle; Ong, Swee Hoe; Kendall, Michelle; Sauter, Rafael; Bannert, Norbert; Fellay, Jacques; Grabowski, M. Kate; Gunsenheimer-Bartmeyer, Barbara; Gunthard, Huldrych F.; Kivela, Pia; Kouyos, Roger D.; Laeyendecker, Oliver; Marvig, Rasmus L.; Meixenberger, Karolin; Meyer, Laurence; van Sighem, Ard; Bonsall, David; Van Der Valk, Marc; Berkhout, Ben; Kellam, Paul; Cornelissen, Marion; Reiss, Peter; Fraser, Christophe 分享 收藏
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Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1 频率问题: Sanger和下一代测序在HIV-1中检测耐药突变的比较 Balakrishna, Suraj; Loosli, Tom; Zaheri, Maryam; Frischknecht, Paul; Huber, Michael; Kusejko, Katharina; Yerly, Sabine; Leuzinger, Karoline; Perreau, Matthieu; Ramette, Alban; Wymant, Chris; Fraser, Christophe; Kellam, Paul; Gall, Astrid; Hirsch, Hans H.; Stoeckle, Marcel; Rauch, Andri; Cavassini, Matthias; Bernasconi, Enos; Notter, Julia; Calmy, Alexandra; Gunthard, Huldrych F.; Metzner, Karin J.; Kouyos, Roger D. 分享 收藏
Estimating SARS-CoV-2 variant fitness and the impact of interventions in England using statistical and geo-spatial agent-based models 使用基于统计和地理空间代理的模型估算英格兰的SARS-CoV-2变异适合度和干预措施的影响 Hinch, Robert; Panovska-Griffiths, Jasmina; Probert, William J. M.; Ferretti, Luca; Wymant, Chris; Di Lauro, Francesco; Baya, Nikolas; Ghafari, Mahan; Abeler-Dorner, Lucie; Fraser, Christophe 分享 收藏
Statistical and agent-based modelling of the transmissibility of different SARS-CoV-2 variants in England and impact of different interventions 英格兰不同SARS-CoV-2变异传染性的统计和基于代理的建模以及不同干预措施的影响 Panovska-Griffiths, J.; Swallow, B.; Hinch, R.; Cohen, J.; Rosenfeld, K.; Stuart, R. M.; Ferretti, L.; Di Lauro, F.; Wymant, C.; Izzo, A.; Waites, W.; Viner, R.; Bonell, C.; Fraser, C.; Klein, D.; Kerr, C. C. 分享 收藏
Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load HIV-1设定点病毒载量的病毒适应性景观的系统发育估计 Zhao, Lele; Wymant, Chris; Blanquart, Francois; Golubchik, Tanya; Gall, Astrid; Bakker, Margreet; Bezemer, Daniela; Hall, Matthew; Ong, Swee Hoe; Albert, Jan; Bannert, Norbert; Fellay, Jacques; Grabowski, M. Kate; Gunsenheimer-Bartmeyer, Barbara; Gunthard, Huldrych F.; Kivela, Pia; Kouyos, Roger D.; Laeyendecker, Oliver; Meyer, Laurence; Porter, Kholoud; van Sighem, Ard; van der Valk, Marc; Berkhout, Ben; Kellam, Paul; Cornelissen, Marion; Reiss, Peter; Fraser, Christophe; Ferretti, Luca 分享 收藏
Time to evaluate COVID-19 contact-tracing apps Colizza, Vittoria; Grill, Eva; Mikolajczyk, Rafael; Cattuto, Ciro; Kucharski, Adam; Riley, Steven; Kendall, Michelle; Lythgoe, Katrina; Bonsall, David; Wymant, Chris; Abeler-Dorner, Lucie; Ferretti, Luca; Fraser, Christophe 分享 收藏
Epidemiological changes on the Isle of Wight after the launch of the NHS Test and Trace programme: a preliminary analysis Kendall, Michelle; Milsom, Luke; Abeler-Dorner, Lucie; Wymant, Chris; Ferretti, Luca; Briers, Mark; Holmes, Chris; Bonsall, David; Abeler, Johannes; Fraser, Christophe 分享 收藏
A Comprehensive Genomics Solution for HIV Surveillance and Clinical Monitoring in Low-Income Settings Bonsall, David; Golubchik, Tanya; de Cesare, Mariateresa; Limbada, Mohammed; Kosloff, Barry; MacIntyre-Cockett, George; Hall, Matthew; Wymant, Chris; Ansari, M. Azim; Abeler-Dorner, Lucie; Schaap, Ab; Brown, Anthony; Barnes, Eleanor; Piwowar-Manning, Estelle; Eshleman, Susan; Wilson, Ethan; Emel, Lynda; Hayes, Richard; Fidler, Sarah; Ayles, Helen; Bowden, Rory; Fraser, Christophe 分享 收藏
Quantifying HIV transmission flow between high-prevalence hotspots and surrounding communities: a population-based study in Rakai, Uganda 量化高流行热点与周围社区之间的HIV传播流量: 乌干达拉凯的一项基于人群的研究 Ratmann, Oliver; Kagaayi, Joseph; Hall, Matthew; Golubchick, Tanya; Kigozi, Godfrey; Xi, Xiaoyue; Wymant, Chris; Nakigozi, Gertrude; Abeler-Dorner, Lucie; Bonsall, David; Gall, Astrid; Hoppe, Anne; Kellam, Paul; Bazaale, Jeremiah; Kalibbala, Sarah; Laeyendecker, Oliver; Lessler, Justin; Nalugoda, Fred; Chang, Larry W.; de Oliveira, Tulio; Pillay, Deenan; Quinn, Thomas C.; Reynolds, Steven J.; Spencer, Simon E. F.; Ssekubugu, Robert; Serwadda, David; Wawer, Maria J.; Gray, Ronald H.; Fraser, Christophe; Grabowski, M. Kate 分享 收藏
Evaluation of Phylogenetic Methods for Inferring the Direction of Human Immunodeficiency Virus (HIV) Transmission: HIV Prevention Trials Network (HPTN) 052 Zhang, Yinfeng; Wymant, Chris; Laeyendecker, Oliver; Grabowski, M. Kathryn; Hall, Matthew; Hudelson, Sarah; Piwowar-Manning, Estelle; McCauley, Marybeth; Gamble, Theresa; Hosseinipour, Mina C.; Kumarasamy, Nagalingeswaran; Hakim, James G.; Kumwenda, Johnstone; Mills, Lisa A.; Santos, Breno R.; Grinsztejn, Beatriz; Pilotto, Jose H.; Chariyalertsak, Suwat; Makhema, Joseph; Chen, Ying Q.; Cohen, Myron S.; Fraser, Christophe; Eshleman, Susan H. 分享 收藏
Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis 通过深度序列系统发育分析推断非洲的HIV-1传播网络和流行病传播来源 Ratmann, Oliver; Grabowski, M. Kate; Hall, Matthew; Golubchik, Tanya; Wymant, Chris; Abeler-Dorner, Lucie; Bonsall, David; Hoppe, Anne; Brown, Andrew Leigh; de Oliveira, Tulio; Gall, Astrid; Kellam, Paul; Pillay, Deenan; Kagaayi, Joseph; Kigozi, Godfrey; Quinn, Thomas C.; Wawer, Maria J.; Laeyendecker, Oliver; Serwadda, David; Gray, Ronald H.; Fraser, Christophe; Ayles, Helen; Bowden, Rory; Calvez, Vincent; Cohen, Myron; Dennis, Ann; Essex, Max; Fidler, Sarah; Frampton, Daniel; Hayes, Richard; Herbeck, Joshua T.; Kaleebu, Pontiano; Kityo, Cissy; Lingappa, Jairam; Novitsky, Vladimir; Paton, Nick; Rambaut, Andrew; Seeley, Janet; Ssemwanga, Deogratius; Tanser, Frank; Nakigozi, Gertrude; Ssekubugu, Robert; Nalugoda, Fred; Lutalo, Tom; Galiwango, Ronald; Makumbi, Fred; Sewankambo, Nelson K.; Tobian, Aaron A. R.; Reynolds, Steven J.; Chang, Larry W.; Nabukalu, Dorean; Ndyanabo, Anthony; Ssekasanvu, Joseph; Nakawooya, Hadijja; Nakukumba, Jessica; Kigozi, Grace N.; Nantume, Betty S.; Resty, Nampijja; Kambasu, Jedidah; Nalugemwa, Margaret; Nakabuye, Regina; Ssebanobe, Lawrence; Nankinga, Justine; Kayiira, Adrian; Nanfuka, Gorreth; Ahimbisibwe, Ruth; Tomusange, Stephen; Galiwango, Ronald M.; Kalibbali, Sarah; Nakalanzi, Margaret; Otobi, Joseph Ouma; Ankunda, Denis; Ssembatya, Joseph Lister; Ssemanda, John Baptist; Kairania, Robert; Kato, Emmanuel; Kisakye, Alice; Batte, James; Ludigo, James; Nampijja, Abisagi; Watya, Steven; Nehemia, Kighoma; Anyokot, Margaret, Sr.; Mwinike, Joshua; Kibumba, George; Ssebowa, Paschal; Mondo, George; Wasswa, Francis; Nantongo, Agnes; Kakembo, Rebecca; Galiwango, Josephine; Ssemango, Geoffrey; Redd, Andrew D.; Santelli, John; Kennedy, Caitlin E.; Wagman, Jennifer 分享 收藏
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Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver Wymant, Chris; Blanquart, Francois; Golubchik, Tanya; Gall, Astrid; Bakker, Margreet; Bezemer, Daniela; Croucher, Nicholas J.; Hall, Matthew; Hillebregt, Mariska; Ong, Swee Hoe; Ratmann, Oliver; Albert, Jan; Bannert, Norbert; Fellay, Jacques; Fransen, Katrien; Gourlay, Annabelle; Grabowski, M. Kate; Gunsenheimer-Bartmeyer, Barbara; Gunthard, Huldrych F.; Kivela, Pia; Kouyos, Roger; Laeyendecker, Oliver; Liitsola, Kirsi; Meyer, Laurence; Porter, Kholoud; Ristola, Matti; van Sighem, Ard; Berkhout, Ben; Cornelissen, Marion; Kellam, Paul; Reiss, Peter; Fraser, Christophe 分享 收藏
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Boosted Higgs shapes Schlaffer, Matthias; Spannowsky, Michael; Takeuchi, Michihisa; Weiler, Andreas; Wymant, Chris 分享 收藏
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