未登录 Evaluating methods for identifying and quantifying Streptococcus pneumoniae co-colonization using next-generation sequencing data Hackman, Jada; Hibberd, Martin L.; Swarthout, Todd D.; Hinds, Jason; Ashall, James; Sheppard, Carmen; Tonkin-Hill, Gerry; Gould, Kate; Brown, Comfort; Msefula, Jacquline; Mataya, Andrew A.; Toizumi, Michiko; Yoshida, Lay-Myint; French, Neil; Heyderman, Robert S.; Flasche, Stefan; Kwambana, Brenda; Hue, Stephane 分享 收藏
Reconciling founder variant multiplicity of HIV-1 infection with the rate of CD4+ decline Baxter, James; Villabona-Arenas, Ch. Julian; Thompson, Robin N.; Hue, Stephane; Regoes, Roland R.; Kouyos, Roger D.; Gunthard, Huldrych F.; Albert, Jan; Leigh Brown, Andrew; Atkins, Katherine E. 分享 收藏
Could prophylactic antivirals reduce dengue incidence in a high-prevalence endemic area? Jafari, Yalda; Brady, Oliver J.; Briggs, Joseph R.; Lien, Le Thuy; Mai, Huynh Kim; Nguyen, Hien Anh Thi; Van Loock, Marnix; Herrera-Taracena, Guillermo; Menten, Joris; Iwasaki, Chihiro; Takegata, Mizuki; Kitamura, Noriko; Do Thai, Hung; Minh, Bui Xuan; Morita, Kouichi; Anh, Dang Duc; Clifford, Sam; Prem, Kiesha; Hafalla, Julius; Edmunds, W. John; Yoshida, Lay Myint; Hibberd, Martin L.; Hue, Stephane 分享 收藏
Emergence of Novel Norovirus GII.4 Variant 新型诺如病毒GII.4变体的出现 Chhabra, Preeti; Tully, Damien C.; Mans, Janet; Niendorf, Sandra; Barclay, Leslie; Cannon, Jennifer L.; Montmayeur, Anna M.; Pan, Chao-Yang; Page, Nicola; Williams, Rachel; Tutill, Helena; Roy, Sunando; Celma, Cristina; Beard, Stuart; Mallory, Michael L.; Manouana, Gedeon Prince; Velavan, Thirumalaisamy P.; Adegnika, Ayola Akim; Kremsner, Peter G.; Lindesmith, Lisa C.; Hue, Stephane; Baric, Ralph S.; Breuer, Judith; Vinje, Jan 分享 收藏
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Quantifying the value of viral genomics when inferring who infected whom in the 2014-16 Ebola virus outbreak in Guinea Robert, Alexis; Hei, Joseph Tsui Lok; Watson, Conall H.; Gsell, Pierre-Stephane; Hall, Yper; Rambaut, Andrew; Longini Jr, Ira M.; Sakoba, Keita; Kucharski, Adam J.; Toure, Alhassane; Nadlaou, Severine Danmadji; Barry, Mamadou Saidou; Fofana, Thierno Oumar; Kaba, Ibrahima Lansana; Sylla, Lansana; Diaby, Mohamed Lamine; Soumah, Ousmane; Diallo, Abdourahime; Niare, Amadou; Diallo, Abdourahamane; Eggo, Rosalind M.; Caroll, Miles W.; Henao-Restrepo, Ana Maria; Edmunds, W. John; Hue, Stephane 分享 收藏
Genomic epidemiology of SARS-CoV-2 infections in The Gambia: an analysis of routinely collected surveillance data between March, 2020, and January, 2022 Kanteh, Abdoulie; Jallow, Haruna S.; Manneh, Jarra; Sanyang, Bakary; Kujabi, Mariama A.; Ndure, Sainabou Laye; Jarju, Sheikh; Sey, Alhagie Papa; Damilare, K. Dabiri; Bah, Yaya; Sambou, Sana; Jarju, Gibril; Manjang, Buba; Jagne, Abubacarr; Bittaye, Sheikh Omar; Bittaye, Mustapha; Forrest, Karen; Tiruneh, Desta Alamerew; Samateh, Ahmadou Lamin; Jagne, Sheriffo; Hue, Stephane; Mohammed, Nuredin; Amambua-Ngwa, Alfred; Kampmann, Beate; D'Alessandro, Umberto; de Silva, Thushan, I; Roca, Anna; Sesay, Abdul Karim 分享 收藏
A phylogenetic study of dengue virus in urban Vietnam shows long-term persistence of endemic strains 越南城市登革热病毒的系统发育研究表明，地方性菌株长期存在 Ashall, James; Shah, Sonal; Biggs, Joseph R.; Chang, Jui-Ning R.; Jafari, Yalda; Brady, Oliver J.; Mai, Huynh Kim; Lien, Le Thuy; Do Thai, Hung; Nguyen, Hien Anh Thi; Anh, Dang Duc; Iwasaki, Chihiro; Kitamura, Noriko; Van Loock, Marnix; Herrera-Taracena, Guillermo; Rasschaert, Freya; Van Wesenbeeck, Liesbeth; Yoshida, Lay-Myint; Hafalla, Julius Clemence R.; Hue, Stephane; Hibberd, Martin L. 分享 收藏
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Combining rapid diagnostic tests to estimate primary and post-primary dengue immune status at the point of care 结合快速诊断测试，以在护理点评估原发性和原发性后登革热免疫状态 Biggs, Joseph R.; Sy, Ava Kristy; Ashall, James; Santoso, Marsha S.; Brady, Oliver J.; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Tandoc, Amadou O.; Sucaldito, Nemia L.; Huynh Kim Mai; Le Thuy Lien; Hung Do Thai; Hien Anh Thi Nguyen; Dang Duc Anh; Iwasaki, Chihiro; Kitamura, Noriko; Van Loock, Marnix; Herrera-Taracena, Guillermo; Menten, Joris; Rasschaert, Freya; Van Wesenbeeck, Liesbeth; Masyeni, Sri; Haryanto, Sotianingsih; Yohan, Benediktus; Cutiongco-de La Paz, Eva; Yoshida, Lay-Myint; Hue, Stephane; Capeding, Maria Rosario Z.; Padilla, Carmencita D.; Sasmono, R. Tedjo; Hafalla, Julius Clemence R.; Hibberd, Martin L. 分享 收藏
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Case-area targeted interventions (CATI) for reactive dengue control: Modelling effectiveness of vector control and prophylactic drugs in Singapore 针对反应性登革热控制的病例区针对性干预 (CATI): 在新加坡建立病媒控制和预防药物的有效性模型 Brady, Oliver J.; Kucharski, Adam J.; Funk, Sebastian; Jafari, Yalda; Van Loock, Marnix; Herrera-Taracena, Guillermo; Menten, Joris; Edmunds, W. John; Sim, Shuzhen; Ng, Lee-Ching; Hue, Stephane; Hibberd, Martin L. 分享 收藏
HIV-2 diversity displays two clades within group A with distinct geographical distribution and evolution HIV-2多样性在A组中显示出两个进化枝，具有不同的地理分布和演化 Visseaux, Benoit; Bertine, Melanie; Le Hingrat, Quentin; Ferre, Valentine; Charpentier, Charlotte; Collin, Fideline; Damond, Florence; Matheron, Sophie; Hue, Stephane; Descamps, Diane 分享 收藏
Interactions between timing and transmissibility explain diverse flavivirus dynamics in Fiji 时间和传染性之间的相互作用解释了斐济的多种黄病毒动力学 Henderson, Alasdair D.; Kama, Mike; Aubry, Maite; Hue, Stephane; Teissier, Anita; Naivalu, Taina; Bechu, Vinaisi D.; Kailawadoko, Jimaima; Rabukawaqa, Isireli; Sahukhan, Aalisha; Hibberd, Martin L.; Nilles, Eric J.; Funk, Sebastian; Whitworth, Jimmy; Watson, Conall H.; Lau, Colleen L.; Edmunds, W. John; Cao-Lormeau, Van-Mai; Kucharski, Adam J. 分享 收藏
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Nosocomial transmission of influenza: A retrospective cross-sectional study using next generation sequencing at a hospital in England (2012-2014) 流感的医院传播: 在英国一家医院使用下一代测序的回顾性横断面研究 (2012-2014) Blackburn, Ruth M.; Frampton, Dan; Smith, Catherine M.; Fragaszy, Ellen B.; Watson, Simon J.; Ferns, R. Bridget; Binter, Spela; Coen, Pietro G.; Grant, Paul; Shallcross, Laura J.; Kozlakidis, Zisis; Pillay, Deenan; Kellam, Paul; Hue, Stephane; Nastouli, Eleni; Hayward, Andrew C.; Kinghorn, Jane; Wurie, Fatima; Rahman, Saadia; Johnson, Anne; Dunn, David; Leigh-Brown, Andrew; Morris, Steven; Irving, William; Clark, Duncan; Zambon, Maria; De, S.; Pillay, T.; Freeman, S.; Kidd, M.; Gothard, P.; Miller, R.; Brealey, D. 分享 收藏
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Reconstruction of Ebola chains of transmission using sequence and epidemiological data Robert, A.; Edmunds, J.; Eggo, R.; Henao-Restrepo, A. -M.; Gsell, P. -S.; Watson, C. H.; Longini, I. M.; Rambaut, A.; Camacho, A.; Hue, S. 分享 收藏
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