Justin Jee; Christopher Fong; Karl Pichotta; Thinh Ngoc Tran; Anisha Luthra; Michele Waters; Chenlian Fu; Mirella Altoe; Si-Yang Liu; Steven B. Maron; Mehnaj Ahmed; Susie Kim; Mono Pirun; Walid K. Chatila; Ino de Bruijn; Arfath Pasha; Ritika Kundra; Benjamin Gross; Brooke Mastrogiacomo; Tyler J. Aprati; David Liu; JianJiong Gao; Marzia Capelletti; Kelly Pekala; Lisa Loudon; Maria Perry; Chaitanya Bandlamudi; Mark Donoghue; Baby Anusha Satravada; Axel Martin; Ronglai Shen; Yuan Chen; A. Rose Brannon; Jason Chang; Lior Braunstein; Anyi Li; Anton Safonov; Aaron Stonestrom; Pablo Sanchez-Vela; Clare Wilhelm; Mark Robson; Howard Scher; Marc Ladanyi; Jorge S. Reis-Filho; David B. Solit; David R. Jones; Daniel Gomez; Helena Yu; Debyani Chakravarty; Rona Yaeger; Wassim Abida; Wungki Park; Eileen M. O’Reilly; Julio Garcia-Aguilar; Nicholas Socci; Francisco Sanchez-Vega; Jian Carrot-Zhang; Peter D. Stetson; Ross Levine; Charles M. Rudin; Michael F. Berger; Sohrab P. Shah; Deborah Schrag; Pedram Razavi; Kenneth L. Kehl; Bob T. Li; Gregory J. Riely; Nikolaus Schultz

Systematic generation of a clinicogenomic harmonized oncologic real-world dataset (MSK-CHORD)

CANCER RESEARCH

IF16.6

2024-03-220

PRE

Fong, Christopher J.; Pichotta, Karl; Thinh Tran; Waters, Michele; Fu, Tom; Pirun, Mono; Altoe, Mirella; Mastrogiacomo, Brooke; Luthra, Anisha; Ahmed, Mehnaj; Pasha, Arfath; Kohli, Armaan; Lim, Raymond; Pollard, Tom; Moore, Darin; Gross, Benjamin; Wang, Avery; Chennault, Calla; Kundra, Ritika; Madupuri, Ramyasree; de Bruijn, Ino; Lisman, Aaron; Chatila, Walid K.; Nandakumar, Subhiksha; Begum, Anika; Rose, Doori; Kehl, Kenneth L.; Schrag, Deborah; Berger, Michael; Carrot-Zhang, Jian; Razavi, Pedram; Li, Bob; Stetson, Peter; Schultz, Nikolaus; Jee, Justin

cBioPortal for Cancer Genomics

CANCER RESEARCH

IF16.6

2024-03-220

PRE

Mazor, Tali; de Bruijn, Ino; AlHamad, Rima; Chennault, Calla; Dubin, Corey; Easton-Marks, Jeremy; Fu, Zhaoyuan; Gross, Benjamin; Haynes, Charles; Higgins, David M.; Hwee, Jason; Jagannathan, Prasanna K.; Kalafati, Mirella; Kalletla, Karthik; Ko, James; Kuijpers, Tim; Kumar, Sowmiyaa; Kumari, Priti; Kundra, Ritika; Lai, Bryan; Li, Xiang; Lindsay, James; Lisman, Aaron; Lu, Qi-Xuan; Madupuri, Ramyasree; Ochoa, Angelica; Ozgul, Yusuf Z.; Plantalech, Oleguer; Pon, Matthijs N.; Satravada, Baby A.; Singh, Jessica; Sumer, Selcuk Onur; van Nierop, Pim; Vleugels, Floris; Wang, Avery; Wilson, Manda; Zhang, Hongxin; Zhao, Gaofei; Dogrusoz, Ugur; Heath, Allison; Resnick, Adam; Pugh, Trevor J.; Sander, Chris; Cerami, Ethan; Gao, Jianjiong; Schultz, Nikolaus

Enhanced clinical assessment of hematologic malignancies through routine paired tumor and normal sequencing

通过常规配对肿瘤和正常测序增强血液系统恶性肿瘤的临床评估

NATURE COMMUNICATIONS

IF15.7

2023-10-2811

OAAI

Ptashkin, Ryan N.; Ewalt, Mark D.; Jayakumaran, Gowtham; Kiecka, Iwona; Bowman, Anita S.; Yao, Jinjuan; Casanova, Jacklyn; Lin, Yun-Te David; Petrova-Drus, Kseniya; Mohanty, Abhinita S.; Bacares, Ruben; Benhamida, Jamal; Rana, Satshil; Razumova, Anna; Vanderbilt, Chad; Rema, Anoop Balakrishnan; Rijo, Ivelise; Son-Garcia, Julie; de Bruijn, Ino; Zhu, Menglei; Lachhander, Sean; Wang, Wei; Haque, Mohammad S.; Seshan, Venkatraman E.; Wang, Jiajing; Liu, Ying; Nafa, Khedoudja; Borsu, Laetitia; Zhang, Yanming; Aypar, Umut; Suehnholz, Sarah P.; Chakravarty, Debyani; Park, Jae H.; Abdel-Wahab, Omar; Mato, Anthony R.; Xiao, Wenbin; Roshal, Mikhail; Yabe, Mariko; Batlevi, Connie Lee; Giralt, Sergio; Salles, Gilles; Rampal, Raajit; Tallman, Martin; Stein, Eytan M.; Younes, Anas; Levine, Ross L.; Perales, Miguel-Angel; van den Brink, Marcel R. M.; Dogan, Ahmet; Ladanyi, Marc; Berger, Michael F.; Brannon, A. Rose; Benayed, Ryma; Zehir, Ahmet; Arcila, Maria E.

Analysis and Visualization of Longitudinal Genomic and Clinical Data from the AACR Project GENIE Biopharma Collaborative in cBioPortal

来自AACR项目GENIE Biopharma Collaborative的纵向基因组和临床数据的分析和可视化

CANCER RESEARCH

IF16.6

2023-09-05168

OAAI

de Bruijn, Ino; Kundra, Ritika; Mastrogiacomo, Brooke; Tran, Thinh Ngoc; Sikina, Luke; Mazor, Tali; Li, Xiang; Ochoa, Angelica; Zhao, Gaofei; Lai, Bryan; Abeshouse, Adam; Baiceanu, Diana; Ciftci, Ersin; Dogrusoz, Ugur; Dufilie, Andrew; Erkoc, Ziya; Lara, Elena Garcia; Fu, Zhaoyuan; Gross, Benjamin; Haynes, Charles; Heath, Allison; Higgins, David; Jagannathan, Prasanna; Kalletla, Karthik; Kumari, Priti; Lindsay, James; Lisman, Aaron; Leenknegt, Bas; Lukasse, Pieter; Madela, Divya; Madupuri, Ramyasree; van Nierop, Pim; Plantalech, Oleguer; Quach, Joyce; Resnick, Adam C.; Rodenburg, Sander Y. A.; Satravada, Baby A.; Schaeffer, Fedde; Sheridan, Robert; Singh, Jessica; Sirohi, Rajat; Sumer, Selcuk Onur; van Hagen, Sjoerd; Wang, Avery; Wilson, Manda; Zhang, Hongxin; Zhu, Kelsey; Rusk, Nicole; Brown, Samantha; Lavery, Jessica A.; Panageas, Katherine S.; Rudolph, Julia E.; LeNoue-Newton, Michele L.; Warner, Jeremy L.; Guo, Xindi; Hunter-Zinck, Haley; Yu, Thomas V.; Pilai, Shirin; Nichols, Chelsea; Gardos, Stuart M.; Philip, John; Kehl, Kenneth L.; Riely, Gregory J.; Schrag, Deborah; Lee, Jocelyn; Fiandalo, Michael V.; Sweeney, Shawn M.; Pugh, Trevor J.; Sander, Chris; Cerami, Ethan; Gao, Jianjiong; Schultz, Nikolaus

The GENIE BPC NSCLC Cohort: A Real-World Repository Integrating Standardized Clinical and Genomic Data for 1,846 Patients with Non-Small Cell Lung Cancer

CLINICAL CANCER RESEARCH

IF10.2

2023-05-2410

OAAI

Choudhury, Noura J.; Lavery, Jessica A.; Brown, Samantha; de Bruijn, Ino; Jee, Justin; Tran, Thinh Ngoc; Rizvi, Hira; Arbour, Kathryn C.; Whiting, Karissa; Shen, Ronglai; Hellmann, Matthew; Bedard, Philippe L.; Yu, Celeste; Leighl, Natasha; LeNoue-Newton, Michele; Micheel, Christine; Warner, Jeremy L.; Ginsberg, Michelle S.; Plodkowski, Andrew; Girshman, Jeffrey; Sawan, Peter; Pillai, Shirin; Sweeney, Shawn M.; Kehl, Kenneth L.; Panageas, Katherine S.; Schultz, Nikolaus; Schrag, Deborah; Riely, Gregory J.

cBioPortal for Cancer Genomics

CANCER RESEARCH

IF16.6

2023-04-041

PRE

de Bruijn, Ino; Mazor, Tali; Abeshouse, Adam; Baiceanu, Diana; Carrero, Stephanie; Lara, Elena Garcia; Gross, Benjamin; Higgins, David M.; Jagannathan, Prasanna K.; Kumari, Priti; Kundra, Ritika; Lai, Bryan; Li, Xiang; Lindsay, James; Lisman, Aaron; Madala, Divya; Madupuri, Ramyasree; Ochoa, Angelica; Ozgul, Yusuf Ziya; Plantalech, Oleguer; Rodenburg, Sander; Satravada, Baby Anusha; Sheridan, Robert; Sikina, Lucas; Singh, Jessica; Sumer, S. Onur; Sun, Yichao; van Nierop, Pim; Wang, Avery; Wilson, Manda; Zhang, Hongxin; Zhao, Gaofei; van Hagen, Sjoerd; Dogrusoz, Ugur; Heath, Allison; Resnick, Adam; Pugh, Trevor J.; Sander, Chris; Cerami, Ethan; Gao, Jianjiong; Schultz, Nikolaus

reVUE: repository for variants with unexpected effects

CANCER RESEARCH

IF16.6

2023-04-040

PRE

Ultra-sensitive detection of circulating tumor DNA by whole-genome sequencing of blood samples from locally advanced rectal cancer patients receiving neoadjuvant therapy and enrolled in watch-and-wait strategies for organ preservation

CANCER RESEARCH

IF16.6

2023-04-040

PRE

Sanchez-Vega, Francisco; Chen, Chin-Tung; Afterman, Danielle; Omer, Dana; Darmofal, Madison; de Bruijn, Ino; Chatila, Walid K.; Drescher, Matthew; Tam, Grittney; Lauterman, Tomer; Kuzman, Maja; Gonzalez, Santiago; Glavas, Dunja; Samdbeck, James; Maloney, Dillon; Levatic, Jurica; Deochand, Sunil; Yahalom, Michael; Ptashkin, Ryan; Tavassoly, Iman; Donenhirsh, Zohar; White, Eric; Kandasamy, Ravi; Alon, Ury; Berger, Michael F.; Loomis, Brian; Polak, Paz; Oklander, Boris; Zviran, Asaf; Garcia-Aguilar, Julio

Quantitative integration of PIK3CA hotspots and paralogy identifies occult oncogenic mutants in PIK3CD

CANCER RESEARCH

IF16.6

2023-04-040

PRE

Genome Nexus: A Comprehensive Resource for the Annotation and Interpretation of Genomic Variants in Cancer

基因组Nexus: 癌症基因组变异的注释和解释的综合资源

JCO CLINICAL CANCER INFORMATICS

IF2.8

2022-05-017

The evolution of RET inhibitor resistance in RET-driven lung and thyroid cancers (vol 13, 1450, 2022)

NATURE COMMUNICATIONS

IF15.7

2022-04-051

OAAI

Rosen, Ezra Y.; Won, Helen H.; Zheng, Youyun; Cocco, Emiliano; Selcuklu, Duygu; Gong, Yixiao; Friedman, Noah D.; de Bruijn, Ino; Sumer, Onur; Bielski, Craig M.; Savin, Casey; Bourque, Caitlin; Falcon, Christina; Clarke, Nikeysha; Jing, Xiaohong; Meng, Fanli; Zimel, Catherine; Shifman, Sophie; Kittane, Srushti; Wu, Fan; Ladanyi, Marc; Ebata, Kevin; Kherani, Jennifer; Brandhuber, Barbara J.; Fagin, James; Sherman, Eric J.; Rekhtman, Natasha; Berger, Michael F.; Scaltriti, Maurizio; Hyman, David M.; Taylor, Barry S.; Drilon, Alexander

The evolution of RET inhibitor resistance in RET-driven lung and thyroid cancers

NATURE COMMUNICATIONS

IF15.7

2022-03-1861

OAAI

Rosen, Ezra Y.; Won, Helen H.; Zheng, Youyun; Cocco, Emiliano; Selcuklu, Duygu; Gong, Yixiao; Friedman, Noah D.; de Bruijn, Ino; Sumer, Onur; Bielski, Craig M.; Savin, Casey; Bourque, Caitlin; Falcon, Christina; Clarke, Nikeysha; Jing, Xiaohong; Meng, Fanli; Zimel, Catherine; Shifman, Sophie; Kittane, Srusthi; Wu, Fan; Ladanyi, Marc; Ebata, Kevin; Kherani, Jennifer; Brandhuber, Barbara J.; Fagin, James; Sherman, Eric J.; Rekhtman, Natasha; Berger, Michael F.; Scaltriti, Maurizio; Hyman, David M.; Taylor, Barry S.; Drilon, Alexander

The context-specific role of germline pathogenicity in tumorigenesis

生殖细胞致病性在肿瘤发生中的上下文特异性作用

NATURE GENETICS

IF31.8

2021-11-0558

OAAI

Srinivasan, Preethi; Bandlamudi, Chaitanya; Jonsson, Philip; Kemel, Yelena; Chavan, Shweta S.; Richards, Allison L.; Penson, Alexander, V; Bielski, Craig M.; Fong, Christopher; Syed, Aijazuddin; Jayakumaran, Gowtham; Prasad, Meera; Hwee, Jason; Sumer, Selcuk Onur; de Bruijn, Ino; Li, Xiang; Gao, JianJiong; Schultz, Nikolaus; Cambria, Roy; Galle, Jesse; Mukherjee, Semanti; Vijai, Joseph; Cadoo, Karen A.; Carlo, Maria, I; Walsh, Michael F.; Mandelker, Diana; Ceyhan-Birsoy, Ozge; Shia, Jinru; Zehir, Ahmet; Ladanyi, Marc; Hyman, David M.; Zhang, Liying; Offit, Kenneth; Robson, Mark E.; Solit, David B.; Stadler, Zsofia K.; Berger, Michael F.; Taylor, Barry S.

Genomic characterization of small cell carcinomas of the uterine cervix

MOLECULAR ONCOLOGY

IF4.5

2021-05-1324

OAAI

Ino de Bruijn

个人简介

教育背景

工作经历

荣誉奖项

研究方向