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A unified classification system for eukaryotic transposable elements

delete2007-12-01
delete2.3K
PRE
AI
T
Thomas Wicker *
F
François Sabot
A
Aurélie Hua‐Van
J
Jeffrey L. Bennetzen
P
Pierre Capy
B
Boulos Chalhoub
A
Andrew J. Flavell
P
Philippe Leroy
M
Michele Morgante
O
Olivier Panaud
E
Etienne Paux
P
Phillip SanMiguel
A
Alan H. Schulman
DOI:10.1038/nrg2165delete
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摘要

摘要

En 中文
Our knowledge of the structure and composition of genomes is rapidly progressing in pace with their sequencing. The emerging data show that a significant portion of eukaryotic genomes is composed of transposable elements (TEs). Given the abundance and diversity of TEs and the speed at which large quantities of sequence data are emerging, identification and annotation of TEs presents a significant challenge. Here we propose the first unified hierarchical classification system, designed on the basis of the transposition mechanism, sequence similarities and structural relationships, that can be easily applied by non-experts. The system and nomenclature is kept up to date at the WikiPoson web site.
Keyword:
ROLLING-CIRCLE TRANSPOSONS
DNA TRANSPOSONS
DROSOPHILA-MELANOGASTER
MASSIVE AMPLIFICATION
EVOLUTIONARY DYNAMICS
TERMINAL REPEATS
GENOME
RETROTRANSPOSON
GENE
SEQUENCE
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期刊

Nature Reviews Genetics 封面图
Nature Reviews Genetics
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52
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4.0K
被引数:
4.3W

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U
university of helsinki
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centre national de la recherche scientifique (cnrs)
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University of Dundee
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universite clermont auvergne (uca)
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university of zurich
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university system of georgia
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University of Georgia
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Universite Paris Saclay
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