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Computational challenges and opportunities in spatially resolved transcriptomic data analysis
DOI:10.1038/s41467-021-25557-9.png)
摘要
En 中文
Spatially resolved transcriptomic data demand new computational analysis methods to derive biological insights. Here, we comment on these associated computational challenges as well as highlight the opportunities for standardized benchmarking metrics and data-sharing infrastructure in spurring innovation moving forward.
Keyword:
GENE-EXPRESSION
IDENTIFICATION
AI总结
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期刊
IF:
15.7
论文数:
9.4W
被引数:
91.2W
机构
引用论文
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository基因表达综合: NCBI基因表达和杂交阵列数据库
NUCLEIC ACIDS RESEARCH
IF13.1
Identification of spatial expression trends in single-cell gene expression data单细胞基因表达数据中空间表达趋势的识别
NATURE METHODS
IF32.1
The Local Transcriptome in the Synaptic Neuropil Revealed by Deep Sequencing and High-Resolution Imaging
NEURON
IF15
Statistical analysis of spatial expression patterns for spatially resolved transcriptomic studies空间解析转录组学研究的空间表达模式的统计分析
NATURE METHODS
IF32.1
Inferring spatial and signaling relationships between cells from single cell transcriptomic data从单细胞转录组数据推断细胞之间的空间和信号关系
NATURE COMMUNICATIONS
IF15.7

